Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2934

Experiment: Carnitine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (N)
3,290,084	+				+0.1
3,290,084	+		Pf1N1B4_2933	0.30	-1.1
3,290,084	+		Pf1N1B4_2933	0.30	-0.9
3,290,084	+		Pf1N1B4_2933	0.30	-0.4
3,290,084	+		Pf1N1B4_2933	0.30	-1.9
3,290,084	+		Pf1N1B4_2933	0.30	+0.8
3,290,084	+		Pf1N1B4_2933	0.30	-0.5
3,290,085	-		Pf1N1B4_2933	0.30	+0.1
3,290,085	-		Pf1N1B4_2933	0.30	+0.8
3,290,085	-		Pf1N1B4_2933	0.30	+0.8
3,290,085	-		Pf1N1B4_2933	0.30	-1.4
3,290,085	-				+0.1
3,290,085	-		Pf1N1B4_2933	0.30	+0.1
3,290,085	-		Pf1N1B4_2933	0.30	-0.1
3,290,085	-		Pf1N1B4_2933	0.30	+0.1
3,290,085	-		Pf1N1B4_2933	0.30	+1.6
3,290,085	-		Pf1N1B4_2933	0.30	+0.5
3,290,085	-		Pf1N1B4_2933	0.30	+1.1
3,290,124	-		Pf1N1B4_2933	0.33	-0.4
3,290,124	-		Pf1N1B4_2933	0.33	-0.9
3,290,124	-		Pf1N1B4_2933	0.33	+0.8
3,290,124	-		Pf1N1B4_2933	0.33	+1.6
3,290,216	+		Pf1N1B4_2933	0.40	-0.9
3,290,217	-		Pf1N1B4_2933	0.40	+0.1
3,290,394	-		Pf1N1B4_2933	0.54	-0.5
3,290,394	-		Pf1N1B4_2933	0.54	-0.4
3,290,419	+		Pf1N1B4_2933	0.56	+0.6
3,290,419	+		Pf1N1B4_2933	0.56	-1.5
3,290,420	-		Pf1N1B4_2933	0.56	-0.9
3,290,420	-		Pf1N1B4_2933	0.56	-0.1
3,290,691	-		Pf1N1B4_2933	0.77	+0.3
3,291,046	+		Pf1N1B4_2934	0.10	+0.1
3,291,046	+		Pf1N1B4_2934	0.10	+1.2
3,291,047	-		Pf1N1B4_2934	0.10	+1.1
3,291,047	-		Pf1N1B4_2934	0.10	-1.1
3,291,047	-				+0.8
3,291,047	-		Pf1N1B4_2934	0.10	+0.1
3,291,047	-		Pf1N1B4_2934	0.10	-0.4
3,291,047	-		Pf1N1B4_2934	0.10	+1.1
3,291,047	-		Pf1N1B4_2934	0.10	-2.3
3,291,085	+		Pf1N1B4_2934	0.16	+0.3
3,291,085	+		Pf1N1B4_2934	0.16	-0.5
3,291,085	+		Pf1N1B4_2934	0.16	+0.3
3,291,085	+		Pf1N1B4_2934	0.16	+1.1
3,291,085	+		Pf1N1B4_2934	0.16	-1.9
3,291,085	+		Pf1N1B4_2934	0.16	-1.5
3,291,085	+		Pf1N1B4_2934	0.16	+0.8
3,291,085	+		Pf1N1B4_2934	0.16	-1.2
3,291,085	+		Pf1N1B4_2934	0.16	-0.5
3,291,085	+		Pf1N1B4_2934	0.16	-0.9
3,291,086	-		Pf1N1B4_2934	0.16	+1.9
3,291,086	-		Pf1N1B4_2934	0.16	-0.5
3,291,086	-		Pf1N1B4_2934	0.16	-1.3
3,291,086	-		Pf1N1B4_2934	0.16	+0.1
3,291,086	-		Pf1N1B4_2934	0.16	+0.9
3,291,086	-		Pf1N1B4_2934	0.16	-0.9
3,291,086	-		Pf1N1B4_2934	0.16	+0.5
3,291,086	-		Pf1N1B4_2934	0.16	+0.5
3,291,283	+		Pf1N1B4_2934	0.47	+2.9
3,291,283	+		Pf1N1B4_2934	0.47	-0.9
3,291,283	+		Pf1N1B4_2934	0.47	+0.8
3,291,283	+		Pf1N1B4_2934	0.47	+0.1
3,291,283	+		Pf1N1B4_2934	0.47	+1.6
3,291,283	+		Pf1N1B4_2934	0.47	+0.5
3,291,283	+		Pf1N1B4_2934	0.47	-0.2
3,291,283	+		Pf1N1B4_2934	0.47	+0.1
3,291,283	+		Pf1N1B4_2934	0.47	+1.5
3,291,284	-		Pf1N1B4_2934	0.47	+0.9
3,291,284	-		Pf1N1B4_2934	0.47	-0.9
3,291,284	-		Pf1N1B4_2934	0.47	-0.9
3,291,284	-		Pf1N1B4_2934	0.47	+1.1
3,291,284	-		Pf1N1B4_2934	0.47	-1.9
3,291,284	-		Pf1N1B4_2934	0.47	+0.6
3,291,284	-		Pf1N1B4_2934	0.47	-0.4
3,291,284	-		Pf1N1B4_2934	0.47	-1.9
3,291,284	-		Pf1N1B4_2934	0.47	-1.2
3,291,284	-		Pf1N1B4_2934	0.47	+2.6
3,291,284	-		Pf1N1B4_2934	0.47	-0.9
3,291,284	-		Pf1N1B4_2934	0.47	-0.2
3,291,284	-		Pf1N1B4_2934	0.47	-0.4
3,291,284	-		Pf1N1B4_2934	0.47	-1.5
3,291,284	-		Pf1N1B4_2934	0.47	+0.5
3,291,284	-		Pf1N1B4_2934	0.47	+1.1
3,291,284	-		Pf1N1B4_2934	0.47	-1.5
3,291,466	+		Pf1N1B4_2934	0.76	-1.2
3,291,466	+		Pf1N1B4_2934	0.76	-0.6
3,291,467	-		Pf1N1B4_2934	0.76	+0.5
3,291,499	+		Pf1N1B4_2934	0.81	+1.1
3,291,499	+		Pf1N1B4_2934	0.81	+1.4
3,291,499	+		Pf1N1B4_2934	0.81	+1.4
3,291,499	+		Pf1N1B4_2934	0.81	-1.2
3,291,499	+		Pf1N1B4_2934	0.81	+0.1
3,291,499	+		Pf1N1B4_2934	0.81	-1.9
3,291,499	+		Pf1N1B4_2934	0.81	-1.9
3,291,500	-		Pf1N1B4_2934	0.81	+0.9
3,291,500	-		Pf1N1B4_2934	0.81	-0.9
3,291,500	-		Pf1N1B4_2934	0.81	+0.6
3,291,500	-		Pf1N1B4_2934	0.81	+0.3
3,291,500	-		Pf1N1B4_2934	0.81	+0.6
3,291,500	-		Pf1N1B4_2934	0.81	-2.8
3,291,500	-		Pf1N1B4_2934	0.81	+0.4
3,291,500	-		Pf1N1B4_2934	0.81	-0.4
3,291,500	-				+1.1
3,291,500	-		Pf1N1B4_2934	0.81	+1.4
3,291,551	+		Pf1N1B4_2934	0.89	-0.9
3,291,551	+		Pf1N1B4_2934	0.89	+0.7
3,291,551	+		Pf1N1B4_2934	0.89	+0.1
3,291,552	-				+0.1
3,291,552	-		Pf1N1B4_2934	0.89	+0.1
3,291,552	-		Pf1N1B4_2934	0.89	+0.6
3,291,552	-		Pf1N1B4_2934	0.89	+0.2
3,291,569	+				+1.6
3,291,569	+				+0.1
3,291,569	+				+1.9
3,291,582	-				-0.6
3,291,582	-				-0.4
3,291,582	-				-0.8
3,291,657	+				-0.5
3,291,658	-				-3.1
3,291,663	-				+1.4
3,291,667	+				-1.4
3,291,667	+				+0.1
3,291,668	-				+1.1
3,291,685	+				-1.3
3,291,686	-				-1.9
3,291,686	-				-1.5
3,291,687	+				-0.5
3,291,687	+				-0.9
3,291,687	+				+0.1
3,291,687	+				+0.1
3,291,687	+				+2.6
3,291,687	+				-0.5
3,291,688	-				-0.5
3,291,688	-				-0.9
3,291,693	+				+0.8
3,291,693	+				-1.9
3,291,693	+				+0.4
3,291,693	+				-0.4
3,291,693	+				-0.9
3,291,693	+				+1.6
3,291,693	+				-0.4
3,291,693	+				+0.5
3,291,693	+				+2.1
3,291,694	-				+1.9
3,291,694	-				-0.9
3,291,694	-				-0.9
3,291,694	-				-0.9
3,291,740	+				+1.6
3,291,741	-				+1.1
3,291,741	-				-1.5
3,291,741	-				+0.4
3,291,851	+				+1.1
3,291,852	-				+0.1
3,291,852	-				-0.1
3,291,852	-				-1.3
3,292,010	+		Pf1N1B4_2935	0.38	+0.1
3,292,011	-		Pf1N1B4_2935	0.38	-0.9
3,292,011	-		Pf1N1B4_2935	0.38	+0.1
3,292,136	-		Pf1N1B4_2935	0.61	-0.2
3,292,277	+		Pf1N1B4_2935	0.86	+1.9
3,292,278	-		Pf1N1B4_2935	0.86	+0.1
3,292,301	+				+0.4
3,292,301	+				+0.6
3,292,302	-				+1.1
3,292,302	-				+0.5
3,292,302	-				+0.1
3,292,352	+				+0.6
3,292,352	+				-1.5
3,292,352	+				-0.5
3,292,352	+				-0.4
3,292,352	+				-0.6
3,292,352	+				-1.1
3,292,353	-				+1.1
3,292,353	-				-1.2
3,292,353	-				-1.5
3,292,353	-				-0.3
3,292,353	-				-2.1
3,292,390	+				+2.1
3,292,390	+				+1.6
3,292,391	-				-0.4
3,292,391	-				-0.4
3,292,508	+				+1.4
3,292,508	+				-0.9
3,292,516	+				+1.1
3,292,516	+				+0.6
3,292,517	-				+0.1
3,292,517	-				-1.9
3,292,569	+				-0.5
3,292,619	-				-0.4