Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2302

Experiment: Carnitine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (N)
2,620,068	+		Pf1N1B4_2301	0.64	+0.3
2,620,069	-		Pf1N1B4_2301	0.64	+0.3
2,620,069	-		Pf1N1B4_2301	0.64	-2.5
2,620,069	-		Pf1N1B4_2301	0.64	+0.5
2,620,351	+		Pf1N1B4_2301	0.85	-0.5
2,620,414	+		Pf1N1B4_2301	0.89	-0.7
2,620,414	+		Pf1N1B4_2301	0.89	+0.6
2,620,414	+		Pf1N1B4_2301	0.89	-0.1
2,620,414	+		Pf1N1B4_2301	0.89	-1.7
2,620,414	+		Pf1N1B4_2301	0.89	-0.4
2,620,415	-		Pf1N1B4_2301	0.89	-1.3
2,620,415	-		Pf1N1B4_2301	0.89	+0.3
2,620,415	-		Pf1N1B4_2301	0.89	+0.2
2,620,415	-		Pf1N1B4_2301	0.89	+0.3
2,620,415	-		Pf1N1B4_2301	0.89	+0.3
2,620,415	-		Pf1N1B4_2301	0.89	-1.7
2,620,415	-		Pf1N1B4_2301	0.89	-1.5
2,620,415	-		Pf1N1B4_2301	0.89	-1.3
2,620,415	-		Pf1N1B4_2301	0.89	-0.1
2,620,415	-		Pf1N1B4_2301	0.89	+0.3
2,620,415	-		Pf1N1B4_2301	0.89	-0.7
2,620,452	+				-0.3
2,620,453	-				+0.7
2,620,494	-				-0.1
2,620,494	-				-1.7
2,620,494	-				-1.7
2,620,565	+				+1.6
2,620,565	+				-1.7
2,620,565	+				-0.7
2,620,566	-				-1.3
2,620,566	-				+1.0
2,620,566	-				+0.8
2,620,566	-				-0.3
2,620,566	-				+0.8
2,620,577	-				-0.3
2,620,577	-				+0.0
2,620,577	-				+1.6
2,620,623	+				+0.3
2,620,624	-				+0.4
2,620,634	+				-1.3
2,620,634	+				-0.9
2,620,634	+				-0.2
2,620,635	-				-0.2
2,620,635	-				-1.0
2,620,638	+				-1.1
2,620,639	-				+0.3
2,620,639	-				+0.3
2,620,639	-				+1.6
2,620,779	-				+0.6
2,620,784	+				-0.2
2,620,784	+				-0.7
2,620,784	+				+0.8
2,620,785	-				-0.3
2,620,785	-				-0.1
2,620,785	-				-0.7
2,620,785	-				-0.3
2,620,785	-				+2.8
2,620,950	+		Pf1N1B4_2302	0.14	+0.1
2,620,950	+		Pf1N1B4_2302	0.14	+0.3
2,620,951	-		Pf1N1B4_2302	0.14	-1.1
2,621,119	+		Pf1N1B4_2302	0.30	-1.2
2,621,119	+		Pf1N1B4_2302	0.30	+1.8
2,621,119	+		Pf1N1B4_2302	0.30	-1.5
2,621,119	+		Pf1N1B4_2302	0.30	-0.5
2,621,119	+		Pf1N1B4_2302	0.30	-0.0
2,621,119	+		Pf1N1B4_2302	0.30	+0.3
2,621,119	+		Pf1N1B4_2302	0.30	+1.6
2,621,120	-		Pf1N1B4_2302	0.30	-0.7
2,621,120	-		Pf1N1B4_2302	0.30	+0.5
2,621,120	-		Pf1N1B4_2302	0.30	-0.2
2,621,120	-		Pf1N1B4_2302	0.30	+0.4
2,621,120	-		Pf1N1B4_2302	0.30	+1.5
2,621,122	+		Pf1N1B4_2302	0.30	+0.1
2,621,122	+		Pf1N1B4_2302	0.30	+0.6
2,621,122	+		Pf1N1B4_2302	0.30	-0.2
2,621,122	+		Pf1N1B4_2302	0.30	+0.3
2,621,122	+		Pf1N1B4_2302	0.30	+1.1
2,621,122	+		Pf1N1B4_2302	0.30	-1.0
2,621,123	-		Pf1N1B4_2302	0.30	+0.3
2,621,123	-		Pf1N1B4_2302	0.30	+1.8
2,621,123	-		Pf1N1B4_2302	0.30	-0.7
2,621,123	-		Pf1N1B4_2302	0.30	+3.3
2,621,125	+		Pf1N1B4_2302	0.30	+0.0
2,621,141	+		Pf1N1B4_2302	0.32	+0.3
2,621,257	+		Pf1N1B4_2302	0.43	-1.3
2,621,257	+		Pf1N1B4_2302	0.43	+0.5
2,621,257	+		Pf1N1B4_2302	0.43	-0.5
2,621,257	+		Pf1N1B4_2302	0.43	-2.1
2,621,257	+		Pf1N1B4_2302	0.43	-0.7
2,621,257	+		Pf1N1B4_2302	0.43	+1.6
2,621,257	+				+1.3
2,621,258	-		Pf1N1B4_2302	0.43	+0.6
2,621,258	-		Pf1N1B4_2302	0.43	-0.3
2,621,261	-		Pf1N1B4_2302	0.43	-0.1
2,621,261	-		Pf1N1B4_2302	0.43	+0.3
2,621,261	-		Pf1N1B4_2302	0.43	+0.6
2,621,329	+		Pf1N1B4_2302	0.49	+0.3
2,621,329	+		Pf1N1B4_2302	0.49	+1.3
2,621,329	+		Pf1N1B4_2302	0.49	+0.7
2,621,329	+		Pf1N1B4_2302	0.49	-0.7
2,621,329	+		Pf1N1B4_2302	0.49	+0.3
2,621,330	-		Pf1N1B4_2302	0.50	+0.5
2,621,362	+		Pf1N1B4_2302	0.53	-0.3
2,621,362	+		Pf1N1B4_2302	0.53	-0.2
2,621,362	+		Pf1N1B4_2302	0.53	+0.8
2,621,362	+		Pf1N1B4_2302	0.53	-0.1
2,621,362	+		Pf1N1B4_2302	0.53	-1.5
2,621,362	+		Pf1N1B4_2302	0.53	-0.6
2,621,363	-		Pf1N1B4_2302	0.53	+0.3
2,621,363	-		Pf1N1B4_2302	0.53	-2.1
2,621,420	-		Pf1N1B4_2302	0.58	-0.5
2,621,420	-		Pf1N1B4_2302	0.58	-0.3
2,621,420	-		Pf1N1B4_2302	0.58	+0.8
2,621,425	+		Pf1N1B4_2302	0.58	+2.1
2,621,426	-		Pf1N1B4_2302	0.59	+0.3
2,621,527	+		Pf1N1B4_2302	0.68	-0.3
2,621,527	+		Pf1N1B4_2302	0.68	-0.2
2,621,528	-		Pf1N1B4_2302	0.68	+1.3
2,621,528	-		Pf1N1B4_2302	0.68	-0.5
2,621,566	+		Pf1N1B4_2302	0.72	-0.7
2,621,566	+		Pf1N1B4_2302	0.72	-0.1
2,621,620	+		Pf1N1B4_2302	0.77	-0.5
2,621,620	+		Pf1N1B4_2302	0.77	-1.1
2,621,621	-		Pf1N1B4_2302	0.77	-0.5
2,621,621	-		Pf1N1B4_2302	0.77	-0.7
2,621,680	+		Pf1N1B4_2302	0.82	+0.3
2,621,680	+		Pf1N1B4_2302	0.82	-0.7
2,621,680	+				+1.3
2,621,680	+		Pf1N1B4_2302	0.82	-0.3
2,621,680	+		Pf1N1B4_2302	0.82	-1.7
2,621,680	+		Pf1N1B4_2302	0.82	-1.2
2,621,680	+		Pf1N1B4_2302	0.82	-0.7
2,621,680	+		Pf1N1B4_2302	0.82	-1.2
2,621,681	-		Pf1N1B4_2302	0.83	+0.7
2,621,681	-		Pf1N1B4_2302	0.83	+1.5
2,621,749	+		Pf1N1B4_2302	0.89	+0.8
2,621,749	+		Pf1N1B4_2302	0.89	+1.3
2,621,749	+				+0.3
2,621,749	+		Pf1N1B4_2302	0.89	+0.5
2,621,749	+		Pf1N1B4_2302	0.89	+1.3
2,621,749	+		Pf1N1B4_2302	0.89	-0.3
2,621,749	+		Pf1N1B4_2302	0.89	-0.7
2,621,749	+		Pf1N1B4_2302	0.89	+1.0
2,621,749	+		Pf1N1B4_2302	0.89	-1.2
2,621,749	+		Pf1N1B4_2302	0.89	-1.2
2,621,749	+		Pf1N1B4_2302	0.89	+0.8
2,621,749	+		Pf1N1B4_2302	0.89	+0.5
2,621,749	+		Pf1N1B4_2302	0.89	-1.4
2,621,749	+		Pf1N1B4_2302	0.89	+0.1
2,621,749	+		Pf1N1B4_2302	0.89	+0.7
2,621,750	-		Pf1N1B4_2302	0.89	-0.3
2,621,750	-		Pf1N1B4_2302	0.89	+0.8
2,621,750	-		Pf1N1B4_2302	0.89	-2.7
2,621,750	-		Pf1N1B4_2302	0.89	-0.3
2,621,750	-		Pf1N1B4_2302	0.89	+0.0
2,621,750	-		Pf1N1B4_2302	0.89	+0.3
2,621,750	-		Pf1N1B4_2302	0.89	-2.3
2,621,750	-		Pf1N1B4_2302	0.89	-1.3
2,621,750	-		Pf1N1B4_2302	0.89	-1.2
2,621,750	-		Pf1N1B4_2302	0.89	-0.1
2,621,750	-		Pf1N1B4_2302	0.89	+1.3
2,621,750	-		Pf1N1B4_2302	0.89	-0.3
2,621,750	-		Pf1N1B4_2302	0.89	-0.1
2,621,919	+				+1.8
2,621,919	+				-1.3
2,621,919	+				-0.1
2,621,919	+				-0.3
2,621,920	-				-0.6
2,621,920	-				-1.1
2,621,923	+				-0.5
2,621,923	+				+0.3
2,621,923	+				+2.3
2,621,923	+				+0.0
2,621,923	+				+0.3
2,621,923	+				-0.1
2,621,923	+				+0.3
2,621,923	+				-1.9
2,621,923	+				+1.6
2,621,923	+				+0.8
2,621,923	+				-2.3
2,621,924	-				+1.3
2,621,924	-				-1.7
2,621,924	-				+0.3
2,621,924	-				-1.3
2,621,930	+				-1.3
2,621,930	+				+1.8
2,621,931	-				+0.0
2,621,931	-				+0.1
2,621,931	-				+0.3
2,622,141	+				+0.3
2,622,141	+				-0.7
2,622,142	-				-0.5
2,622,145	+				+0.7
2,622,145	+				-0.4
2,622,145	+				-0.7
2,622,145	+				+0.3
2,622,145	+				+0.4
2,622,145	+				-0.7
2,622,146	-				-0.2
2,622,146	-				-0.3
2,622,146	-				-1.3
2,622,146	-				+0.0
2,622,146	-				-1.0
2,622,146	-				-0.1
2,622,148	+				+1.6
2,622,148	+				-1.8
2,622,148	+				+0.3
2,622,148	+				+0.7
2,622,148	+				+0.3
2,622,149	-				-0.7
2,622,149	-				+0.3
2,622,149	-				-0.5
2,622,173	+				-1.9
2,622,173	+				+0.3
2,622,173	+				-1.7
2,622,173	+				-1.9
2,622,173	+				-3.3
2,622,173	+				-0.3
2,622,173	+				-2.1
2,622,173	+				-0.7
2,622,174	-				-0.4
2,622,174	-				-0.2
2,622,174	-				-1.5
2,622,174	-				+0.3
2,622,174	-				-0.7
2,622,174	-				+0.3
2,622,174	-				+1.6
2,622,214	+				-1.7
2,622,214	+				-1.7
2,622,214	+				-1.7
2,622,214	+				-1.7
2,622,214	+				-1.7
2,622,215	-				+0.3
2,622,215	-				-1.1
2,622,215	-				-2.5
2,622,215	-				-1.0
2,622,239	+				-2.9
2,622,239	+				+0.3
2,622,240	-				-1.3
2,622,240	-				-2.1
2,622,240	-				-2.3
2,622,240	-				-1.7
2,622,240	-				-2.1
2,622,240	-				-0.7
2,622,240	-				-1.0
2,622,240	-				-0.7
2,622,502	+		Pf1N1B4_2303	0.19	-3.7
2,622,502	+		Pf1N1B4_2303	0.19	+0.3
2,622,502	+		Pf1N1B4_2303	0.19	-1.3
2,622,502	+		Pf1N1B4_2303	0.19	-2.3
2,622,502	+		Pf1N1B4_2303	0.19	-2.7
2,622,503	-		Pf1N1B4_2303	0.19	-2.3
2,622,503	-		Pf1N1B4_2303	0.19	-1.7
2,622,503	-		Pf1N1B4_2303	0.19	-2.5
2,622,503	-		Pf1N1B4_2303	0.19	-2.3
2,622,503	-		Pf1N1B4_2303	0.19	-2.3
2,622,503	-		Pf1N1B4_2303	0.19	-3.3
2,622,503	-		Pf1N1B4_2303	0.19	-2.7
2,622,556	+		Pf1N1B4_2303	0.22	-0.7
2,622,609	+		Pf1N1B4_2303	0.25	-2.5
2,622,610	-		Pf1N1B4_2303	0.25	-0.4
2,622,718	+		Pf1N1B4_2303	0.31	-0.7
2,622,719	-		Pf1N1B4_2303	0.31	-1.3
2,622,748	+		Pf1N1B4_2303	0.33	+0.3
2,622,749	-		Pf1N1B4_2303	0.33	-2.6
2,622,749	-		Pf1N1B4_2303	0.33	-3.4
2,622,749	-		Pf1N1B4_2303	0.33	-2.1
2,622,749	-		Pf1N1B4_2303	0.33	-0.5
2,622,749	-		Pf1N1B4_2303	0.33	-0.7