Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1842

Experiment: Carnitine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (N)
2,113,959	+		Pf1N1B4_1841	0.21	+2.7
2,113,959	+		Pf1N1B4_1841	0.21	-2.5
2,113,984	+		Pf1N1B4_1841	0.24	+0.8
2,113,984	+				+0.3
2,113,985	-		Pf1N1B4_1841	0.24	+1.3
2,113,985	-		Pf1N1B4_1841	0.24	-1.0
2,113,985	-		Pf1N1B4_1841	0.24	-0.7
2,113,985	-		Pf1N1B4_1841	0.24	-0.1
2,114,076	+		Pf1N1B4_1841	0.33	+0.3
2,114,076	+		Pf1N1B4_1841	0.33	-1.8
2,114,076	+		Pf1N1B4_1841	0.33	-2.0
2,114,076	+		Pf1N1B4_1841	0.33	-1.2
2,114,076	+		Pf1N1B4_1841	0.33	+1.9
2,114,077	-		Pf1N1B4_1841	0.33	-0.1
2,114,077	-		Pf1N1B4_1841	0.33	+0.3
2,114,077	-		Pf1N1B4_1841	0.33	-0.4
2,114,077	-		Pf1N1B4_1841	0.33	+0.7
2,114,077	-		Pf1N1B4_1841	0.33	-0.7
2,114,126	+		Pf1N1B4_1841	0.38	+0.3
2,114,126	+		Pf1N1B4_1841	0.38	-0.4
2,114,126	+		Pf1N1B4_1841	0.38	-2.1
2,114,127	-		Pf1N1B4_1841	0.38	-0.7
2,114,127	-		Pf1N1B4_1841	0.38	-1.2
2,114,127	-		Pf1N1B4_1841	0.38	+0.3
2,114,127	-		Pf1N1B4_1841	0.38	-0.4
2,114,157	+		Pf1N1B4_1841	0.41	+0.7
2,114,158	-		Pf1N1B4_1841	0.41	+0.9
2,114,158	-		Pf1N1B4_1841	0.41	+0.1
2,114,265	+		Pf1N1B4_1841	0.51	+0.3
2,114,265	+		Pf1N1B4_1841	0.51	-0.7
2,114,265	+				+0.9
2,114,265	+		Pf1N1B4_1841	0.51	+1.1
2,114,265	+		Pf1N1B4_1841	0.51	+1.9
2,114,265	+		Pf1N1B4_1841	0.51	+1.1
2,114,265	+		Pf1N1B4_1841	0.51	-0.2
2,114,265	+		Pf1N1B4_1841	0.51	-1.4
2,114,265	+		Pf1N1B4_1841	0.51	+0.8
2,114,265	+		Pf1N1B4_1841	0.51	-0.7
2,114,265	+		Pf1N1B4_1841	0.51	-1.5
2,114,265	+		Pf1N1B4_1841	0.51	+0.1
2,114,265	+		Pf1N1B4_1841	0.51	-1.2
2,114,265	+		Pf1N1B4_1841	0.51	+0.6
2,114,266	-		Pf1N1B4_1841	0.51	+0.1
2,114,266	-		Pf1N1B4_1841	0.51	+1.3
2,114,266	-		Pf1N1B4_1841	0.51	-0.2
2,114,266	-		Pf1N1B4_1841	0.51	+1.7
2,114,266	-		Pf1N1B4_1841	0.51	-0.8
2,114,266	-		Pf1N1B4_1841	0.51	+0.8
2,114,266	-		Pf1N1B4_1841	0.51	+0.8
2,114,440	-		Pf1N1B4_1841	0.68	-1.2
2,114,553	+		Pf1N1B4_1841	0.79	-0.7
2,114,554	-		Pf1N1B4_1841	0.79	+0.3
2,114,610	+		Pf1N1B4_1841	0.85	+0.8
2,114,610	+		Pf1N1B4_1841	0.85	-0.1
2,114,610	+		Pf1N1B4_1841	0.85	+0.3
2,114,610	+		Pf1N1B4_1841	0.85	-0.3
2,114,611	-		Pf1N1B4_1841	0.85	-0.1
2,114,611	-		Pf1N1B4_1841	0.85	+2.2
2,114,611	-				+1.3
2,114,611	-		Pf1N1B4_1841	0.85	-0.3
2,114,611	-		Pf1N1B4_1841	0.85	-1.2
2,114,611	-		Pf1N1B4_1841	0.85	-0.7
2,114,611	-		Pf1N1B4_1841	0.85	+0.7
2,114,611	-				-1.2
2,114,611	-		Pf1N1B4_1841	0.85	+0.3
2,114,611	-		Pf1N1B4_1841	0.85	+0.3
2,114,611	-		Pf1N1B4_1841	0.85	+0.3
2,114,641	+		Pf1N1B4_1841	0.88	+0.3
2,114,676	+				+0.3
2,114,676	+				-0.0
2,114,677	-				+0.3
2,114,720	+				+2.3
2,114,721	-				-0.1
2,114,803	+				+1.7
2,114,803	+				+0.1
2,114,803	+				+0.5
2,114,803	+				+1.3
2,114,804	-				+0.3
2,114,804	-				+0.3
2,114,804	-				-0.2
2,114,804	-				-1.2
2,114,804	-				+0.6
2,114,804	-				+1.9
2,114,813	+				+0.0
2,114,814	-				-0.8
2,114,838	+				+1.3
2,114,838	+				+2.5
2,114,838	+				+0.7
2,114,838	+				+0.3
2,114,838	+				-0.6
2,114,838	+				-0.2
2,114,838	+				-0.1
2,114,839	-				-1.0
2,114,839	-				-0.2
2,114,839	-				-0.2
2,114,839	-				-0.2
2,114,839	-				-0.7
2,114,839	-				-0.7
2,114,839	-				+0.0
2,114,839	-				+0.0
2,114,839	-				-0.0
2,114,839	-				+0.3
2,114,839	-				-0.7
2,114,882	+				+0.3
2,114,883	-				+1.3
2,115,030	+		Pf1N1B4_1842	0.23	+0.3
2,115,031	-		Pf1N1B4_1842	0.23	+1.3
2,115,031	-		Pf1N1B4_1842	0.23	+0.1
2,115,051	+		Pf1N1B4_1842	0.26	-0.8
2,115,051	+		Pf1N1B4_1842	0.26	-0.1
2,115,051	+		Pf1N1B4_1842	0.26	+1.3
2,115,052	-		Pf1N1B4_1842	0.26	-0.7
2,115,052	-		Pf1N1B4_1842	0.26	-0.4
2,115,137	+		Pf1N1B4_1842	0.39	-0.2
2,115,138	-		Pf1N1B4_1842	0.39	-0.2
2,115,218	+		Pf1N1B4_1842	0.52	-0.7
2,115,218	+		Pf1N1B4_1842	0.52	+1.9
2,115,218	+		Pf1N1B4_1842	0.52	+0.8
2,115,218	+		Pf1N1B4_1842	0.52	+0.3
2,115,218	+		Pf1N1B4_1842	0.52	-1.2
2,115,218	+		Pf1N1B4_1842	0.52	+0.3
2,115,218	+		Pf1N1B4_1842	0.52	-1.0
2,115,218	+		Pf1N1B4_1842	0.52	+0.8
2,115,218	+		Pf1N1B4_1842	0.52	+1.7
2,115,218	+		Pf1N1B4_1842	0.52	+0.3
2,115,218	+		Pf1N1B4_1842	0.52	+1.3
2,115,218	+		Pf1N1B4_1842	0.52	+2.3
2,115,219	-		Pf1N1B4_1842	0.52	+0.5
2,115,219	-		Pf1N1B4_1842	0.52	+0.3
2,115,219	-		Pf1N1B4_1842	0.52	-1.7
2,115,219	-		Pf1N1B4_1842	0.52	-1.2
2,115,219	-		Pf1N1B4_1842	0.52	+0.1
2,115,219	-		Pf1N1B4_1842	0.52	-0.7
2,115,219	-		Pf1N1B4_1842	0.52	-1.3
2,115,219	-		Pf1N1B4_1842	0.52	-3.2
2,115,468	+				+0.0
2,115,514	+				-1.8
2,115,514	+				-2.0
2,115,515	-				+1.5
2,115,515	-				+0.1
2,115,524	+				+0.3
2,115,548	+				+0.3
2,115,578	+				-1.7
2,115,579	-				-2.0
2,115,579	-				+1.3
2,115,626	+				+1.0
2,115,626	+				-1.2
2,115,626	+				-1.0
2,115,627	-				-1.2
2,115,627	-				+0.0
2,115,627	-				-0.7
2,115,627	-				-0.0
2,115,627	-				-1.2
2,115,627	-				+1.1
2,115,641	+		Pf1N1B4_1843	0.12	+0.4
2,115,641	+		Pf1N1B4_1843	0.12	+0.8
2,115,641	+		Pf1N1B4_1843	0.12	+1.7
2,115,642	-		Pf1N1B4_1843	0.12	-0.5
2,115,642	-		Pf1N1B4_1843	0.12	-0.1
2,115,642	-		Pf1N1B4_1843	0.12	-0.7
2,115,642	-		Pf1N1B4_1843	0.12	-0.7
2,115,704	+		Pf1N1B4_1843	0.23	-0.9
2,115,704	+		Pf1N1B4_1843	0.23	+0.6
2,115,704	+		Pf1N1B4_1843	0.23	-0.2
2,115,704	+		Pf1N1B4_1843	0.23	-0.9
2,115,704	+		Pf1N1B4_1843	0.23	-0.5
2,115,704	+		Pf1N1B4_1843	0.23	-1.4
2,115,704	+		Pf1N1B4_1843	0.23	+1.2
2,115,704	+		Pf1N1B4_1843	0.23	-0.9
2,115,705	-		Pf1N1B4_1843	0.23	+1.0
2,115,705	-		Pf1N1B4_1843	0.23	-0.2
2,115,705	-		Pf1N1B4_1843	0.23	-0.2
2,115,855	+		Pf1N1B4_1843	0.51	+2.3
2,115,856	-		Pf1N1B4_1843	0.51	-0.1
2,115,856	-		Pf1N1B4_1843	0.51	-1.2
2,115,924	+		Pf1N1B4_1843	0.64	+0.3
2,115,925	-		Pf1N1B4_1843	0.64	-1.7
2,116,106	+				-1.0
2,116,107	-				+0.8
2,116,107	-				+0.0
2,116,148	-				+0.3
2,116,148	-				+0.0
2,116,148	-				-1.1
2,116,169	+				-0.2
2,116,170	-				+0.9
2,116,170	-				-0.2
2,116,170	-				-0.8
2,116,170	-				+0.8
2,116,170	-				-2.0
2,116,170	-				+0.9
2,116,170	-				+0.1
2,116,170	-				+0.3
2,116,173	+				+0.2
2,116,173	+				+0.8
2,116,173	+				-0.7
2,116,173	+				-1.0
2,116,173	+				+0.8
2,116,174	-				+1.3
2,116,174	-				+1.7
2,116,174	-				-0.1
2,116,254	+				-0.7
2,116,254	+				+1.1
2,116,255	-				+0.3
2,116,294	+				-0.1
2,116,294	+				-0.1
2,116,295	-				+1.2
2,116,295	-				-1.7
2,116,295	-				+0.3
2,116,295	-				+0.7
2,116,295	-				-0.7
2,116,295	-				+1.9
2,116,488	+		Pf1N1B4_1844	0.13	+0.8
2,116,488	+		Pf1N1B4_1844	0.13	-0.2
2,116,488	+		Pf1N1B4_1844	0.13	-0.2
2,116,488	+		Pf1N1B4_1844	0.13	+1.2
2,116,489	-		Pf1N1B4_1844	0.13	-2.1