Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1188

Experiment: Carnitine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (N)
1,338,203	+				+1.1
1,338,203	+				-1.7
1,338,203	+				-0.2
1,338,204	-				-1.9
1,338,204	-				+0.1
1,338,204	-				+2.4
1,338,211	-				-1.3
1,338,260	+				+1.1
1,338,260	+				-0.9
1,338,261	-				-0.9
1,338,303	+				-0.9
1,338,303	+				+0.1
1,338,303	+				+2.3
1,338,303	+				-0.8
1,338,303	+				-0.3
1,338,303	+				+0.4
1,338,303	+				+0.1
1,338,304	-				-1.9
1,338,304	-				-0.9
1,338,304	-				+0.1
1,338,304	-				+0.1
1,338,304	-				-0.9
1,338,304	-				+2.3
1,338,304	-				-0.3
1,338,305	+				+0.1
1,338,306	-				+1.4
1,338,306	-				+0.4
1,338,306	-				-1.0
1,338,306	-				-0.6
1,338,306	-				+1.3
1,338,373	-				-1.2
1,338,373	-				+0.1
1,338,429	+				-2.2
1,338,429	+				-0.5
1,338,456	+		Pf1N1B4_1187	0.12	+0.3
1,338,457	-		Pf1N1B4_1187	0.12	+1.1
1,338,585	+		Pf1N1B4_1187	0.28	-1.2
1,338,585	+		Pf1N1B4_1187	0.28	-1.1
1,338,586	-		Pf1N1B4_1187	0.28	+0.1
1,338,705	+		Pf1N1B4_1187	0.42	+0.1
1,338,705	+		Pf1N1B4_1187	0.42	+0.8
1,338,705	+		Pf1N1B4_1187	0.42	+0.4
1,338,706	-		Pf1N1B4_1187	0.42	+1.1
1,338,771	+		Pf1N1B4_1187	0.50	-1.4
1,338,771	+		Pf1N1B4_1187	0.50	+1.1
1,338,771	+				-0.6
1,338,771	+		Pf1N1B4_1187	0.50	-0.1
1,338,771	+		Pf1N1B4_1187	0.50	-0.5
1,338,772	-		Pf1N1B4_1187	0.50	+0.1
1,338,772	-		Pf1N1B4_1187	0.50	+0.4
1,338,772	-		Pf1N1B4_1187	0.50	+0.1
1,338,772	-		Pf1N1B4_1187	0.50	-1.0
1,338,772	-		Pf1N1B4_1187	0.50	+0.1
1,338,772	-		Pf1N1B4_1187	0.50	+0.7
1,338,772	-		Pf1N1B4_1187	0.50	-0.9
1,338,916	+		Pf1N1B4_1187	0.68	-0.5
1,338,916	+		Pf1N1B4_1187	0.68	-0.4
1,338,916	+		Pf1N1B4_1187	0.68	-0.3
1,338,916	+		Pf1N1B4_1187	0.68	+1.4
1,338,917	-		Pf1N1B4_1187	0.68	-0.9
1,338,941	+		Pf1N1B4_1187	0.71	-0.2
1,338,941	+		Pf1N1B4_1187	0.71	+0.7
1,338,942	-		Pf1N1B4_1187	0.71	-0.9
1,338,990	-		Pf1N1B4_1187	0.77	-1.1
1,338,990	-		Pf1N1B4_1187	0.77	+0.1
1,338,998	+		Pf1N1B4_1187	0.78	-1.5
1,338,998	+		Pf1N1B4_1187	0.78	+0.1
1,338,998	+		Pf1N1B4_1187	0.78	-0.3
1,338,998	+		Pf1N1B4_1187	0.78	+0.8
1,338,999	-		Pf1N1B4_1187	0.78	+0.1
1,338,999	-		Pf1N1B4_1187	0.78	+0.7
1,338,999	-		Pf1N1B4_1187	0.78	-0.5
1,339,195	+				+0.6
1,339,195	+				+1.3
1,339,196	+				-0.3
1,339,201	+				+0.8
1,339,202	-				-0.6
1,339,212	+				-0.9
1,339,212	+				-0.9
1,339,212	+				+0.5
1,339,213	-				+0.1
1,339,213	-				+1.1
1,339,213	-				-0.5
1,339,383	+		Pf1N1B4_1188	0.14	+0.7
1,339,488	+		Pf1N1B4_1188	0.21	+0.3
1,339,488	+		Pf1N1B4_1188	0.21	-0.3
1,339,489	-		Pf1N1B4_1188	0.21	-0.9
1,339,657	+		Pf1N1B4_1188	0.33	+0.1
1,339,657	+		Pf1N1B4_1188	0.33	-0.9
1,339,658	-		Pf1N1B4_1188	0.33	-0.4
1,339,658	-		Pf1N1B4_1188	0.33	-0.1
1,339,724	+		Pf1N1B4_1188	0.38	-0.9
1,339,724	+		Pf1N1B4_1188	0.38	+0.7
1,339,724	+		Pf1N1B4_1188	0.38	-0.2
1,339,725	-		Pf1N1B4_1188	0.38	-0.3
1,339,725	-		Pf1N1B4_1188	0.38	+0.1
1,339,737	+		Pf1N1B4_1188	0.38	+0.6
1,339,738	-		Pf1N1B4_1188	0.38	-0.9
1,339,738	-		Pf1N1B4_1188	0.38	-0.9
1,339,738	-		Pf1N1B4_1188	0.38	+1.1
1,339,738	-		Pf1N1B4_1188	0.38	-0.2
1,339,896	+		Pf1N1B4_1188	0.49	-1.5
1,339,896	+		Pf1N1B4_1188	0.49	+1.7
1,339,896	+		Pf1N1B4_1188	0.49	+1.1
1,339,897	-		Pf1N1B4_1188	0.49	-2.5
1,339,897	-		Pf1N1B4_1188	0.49	+0.1
1,339,897	-		Pf1N1B4_1188	0.49	-0.9
1,339,900	+		Pf1N1B4_1188	0.50	-0.9
1,339,900	+		Pf1N1B4_1188	0.50	-0.9
1,339,900	+		Pf1N1B4_1188	0.50	+0.1
1,339,900	+		Pf1N1B4_1188	0.50	+0.7
1,339,900	+		Pf1N1B4_1188	0.50	-0.1
1,339,900	+		Pf1N1B4_1188	0.50	+1.5
1,339,900	+		Pf1N1B4_1188	0.50	-0.9
1,339,900	+		Pf1N1B4_1188	0.50	+0.1
1,339,900	+		Pf1N1B4_1188	0.50	+0.1
1,339,900	+				+1.1
1,339,901	-		Pf1N1B4_1188	0.50	+0.7
1,339,901	-		Pf1N1B4_1188	0.50	-0.5
1,339,901	-		Pf1N1B4_1188	0.50	-0.6
1,339,901	-		Pf1N1B4_1188	0.50	+0.7
1,339,901	-		Pf1N1B4_1188	0.50	-2.5
1,339,901	-		Pf1N1B4_1188	0.50	-0.1
1,339,901	-		Pf1N1B4_1188	0.50	-0.5
1,339,901	-		Pf1N1B4_1188	0.50	+0.1
1,339,901	-		Pf1N1B4_1188	0.50	-1.1
1,339,901	-		Pf1N1B4_1188	0.50	-0.5
1,339,950	+		Pf1N1B4_1188	0.53	-1.1
1,339,950	+		Pf1N1B4_1188	0.53	-1.5
1,340,003	+		Pf1N1B4_1188	0.57	+0.7
1,340,003	+		Pf1N1B4_1188	0.57	+0.8
1,340,003	+		Pf1N1B4_1188	0.57	-0.9
1,340,003	+		Pf1N1B4_1188	0.57	+0.1
1,340,003	+		Pf1N1B4_1188	0.57	-0.1
1,340,004	-		Pf1N1B4_1188	0.57	+0.5
1,340,004	-		Pf1N1B4_1188	0.57	+1.1
1,340,004	-		Pf1N1B4_1188	0.57	-0.5
1,340,004	-		Pf1N1B4_1188	0.57	+0.7
1,340,004	-		Pf1N1B4_1188	0.57	-0.5
1,340,152	+		Pf1N1B4_1188	0.67	+0.1
1,340,153	-		Pf1N1B4_1188	0.67	-0.1
1,340,153	-		Pf1N1B4_1188	0.67	-0.2
1,340,153	-		Pf1N1B4_1188	0.67	+1.1
1,340,153	-		Pf1N1B4_1188	0.67	+0.1
1,340,153	-		Pf1N1B4_1188	0.67	-0.6
1,340,153	-		Pf1N1B4_1188	0.67	+1.7
1,340,171	+		Pf1N1B4_1188	0.68	+0.1
1,340,172	-		Pf1N1B4_1188	0.68	+0.1
1,340,196	-		Pf1N1B4_1188	0.70	+0.1
1,340,196	-		Pf1N1B4_1188	0.70	-0.2
1,340,417	+		Pf1N1B4_1188	0.85	+0.4
1,340,417	+		Pf1N1B4_1188	0.85	+2.1
1,340,417	+		Pf1N1B4_1188	0.85	-1.5
1,340,418	-		Pf1N1B4_1188	0.85	+0.1
1,340,418	-		Pf1N1B4_1188	0.85	-1.7
1,340,438	-		Pf1N1B4_1188	0.87	-1.5
1,340,649	+				+0.2
1,340,649	+				+0.1
1,340,650	-				-0.2
1,340,650	-				-0.9
1,340,650	-				-0.5
1,340,731	+		Pf1N1B4_1189	0.15	-1.5
1,340,737	+		Pf1N1B4_1189	0.16	+0.2
1,340,737	+		Pf1N1B4_1189	0.16	-0.1
1,340,737	+		Pf1N1B4_1189	0.16	+1.7
1,340,737	+		Pf1N1B4_1189	0.16	+0.1
1,340,737	+		Pf1N1B4_1189	0.16	-0.9
1,340,738	-		Pf1N1B4_1189	0.16	-0.3
1,340,738	-		Pf1N1B4_1189	0.16	+0.1
1,340,738	-		Pf1N1B4_1189	0.16	-1.2
1,340,738	-		Pf1N1B4_1189	0.16	+0.5
1,340,738	-		Pf1N1B4_1189	0.16	+0.5
1,340,738	-		Pf1N1B4_1189	0.16	-0.2
1,340,738	-		Pf1N1B4_1189	0.16	-1.5
1,340,953	+		Pf1N1B4_1189	0.48	+0.1
1,340,953	+				+1.1
1,340,953	+		Pf1N1B4_1189	0.48	-0.2
1,340,954	-		Pf1N1B4_1189	0.48	+0.1
1,341,046	-		Pf1N1B4_1189	0.62	-0.6
1,341,242	+				+0.8
1,341,242	+				+1.1
1,341,242	+				-1.9
1,341,242	+				+0.5