Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1186

Experiment: Carnitine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (N)
1,335,560	+				-0.5
1,335,560	+				+2.4
1,335,560	+				-0.9
1,335,560	+				+1.1
1,335,561	-		Pf1N1B4_1185	0.10	-0.9
1,335,561	-		Pf1N1B4_1185	0.10	+0.9
1,335,561	-		Pf1N1B4_1185	0.10	-0.9
1,335,561	-		Pf1N1B4_1185	0.10	+0.1
1,335,561	-		Pf1N1B4_1185	0.10	-0.5
1,335,623	+				+0.1
1,335,624	-		Pf1N1B4_1185	0.18	+1.1
1,335,624	-		Pf1N1B4_1185	0.18	+0.4
1,335,624	-		Pf1N1B4_1185	0.18	-0.3
1,335,624	-		Pf1N1B4_1185	0.18	-1.9
1,335,677	+		Pf1N1B4_1185	0.25	-0.5
1,335,677	+				-0.5
1,335,677	+		Pf1N1B4_1185	0.25	-0.5
1,335,678	-		Pf1N1B4_1185	0.25	+0.7
1,335,678	-		Pf1N1B4_1185	0.25	-0.6
1,335,678	-				+0.7
1,335,678	-		Pf1N1B4_1185	0.25	+0.1
1,335,678	-				-0.9
1,335,678	-		Pf1N1B4_1185	0.25	+0.8
1,335,840	-		Pf1N1B4_1185	0.46	-0.6
1,335,911	+		Pf1N1B4_1185	0.56	-0.9
1,335,911	+		Pf1N1B4_1185	0.56	-0.9
1,335,914	+				+0.1
1,335,915	-		Pf1N1B4_1185	0.56	+2.4
1,335,915	-		Pf1N1B4_1185	0.56	+0.1
1,335,915	-		Pf1N1B4_1185	0.56	+0.8
1,335,915	-		Pf1N1B4_1185	0.56	-0.2
1,335,936	+		Pf1N1B4_1185	0.59	-1.5
1,335,937	-		Pf1N1B4_1185	0.59	+1.1
1,336,034	+		Pf1N1B4_1185	0.72	+0.1
1,336,034	+		Pf1N1B4_1185	0.72	-0.3
1,336,034	+		Pf1N1B4_1185	0.72	+0.1
1,336,035	-		Pf1N1B4_1185	0.72	-0.3
1,336,035	-		Pf1N1B4_1185	0.72	+0.1
1,336,035	-		Pf1N1B4_1185	0.72	-0.5
1,336,035	-		Pf1N1B4_1185	0.72	-1.5
1,336,035	-		Pf1N1B4_1185	0.72	-1.9
1,336,035	-		Pf1N1B4_1185	0.72	+0.3
1,336,035	-		Pf1N1B4_1185	0.72	+0.9
1,336,210	-				+0.1
1,336,292	+				+0.1
1,336,293	-				-0.9
1,336,293	-				+0.1
1,336,293	-				+1.1
1,336,303	-				+0.7
1,336,411	+				+0.4
1,336,411	+				+0.6
1,336,411	+				+0.1
1,336,412	-				+0.1
1,336,423	-				+0.1
1,336,452	-				-1.2
1,336,455	-				+0.8
1,336,462	-				+0.8
1,336,499	+				-1.9
1,336,499	+				+0.4
1,336,500	-				+0.7
1,336,500	-				-1.5
1,336,500	-				+1.4
1,336,500	-				+1.1
1,336,500	-				-1.5
1,336,500	-				+0.1
1,336,513	+				+0.5
1,336,535	+				-0.6
1,336,590	+				-1.2
1,336,590	+				-1.5
1,336,648	+				-1.5
1,336,649	-				-0.3
1,336,736	+		Pf1N1B4_1186	0.13	-2.9
1,336,737	-		Pf1N1B4_1186	0.13	-1.5
1,336,784	+		Pf1N1B4_1186	0.16	+1.1
1,336,976	+		Pf1N1B4_1186	0.27	+0.1
1,337,199	+		Pf1N1B4_1186	0.40	-2.5
1,337,199	+		Pf1N1B4_1186	0.40	+1.3
1,337,200	-		Pf1N1B4_1186	0.41	+0.1
1,337,208	+		Pf1N1B4_1186	0.41	+0.1
1,337,209	-		Pf1N1B4_1186	0.41	-0.4
1,337,209	-		Pf1N1B4_1186	0.41	+0.7
1,337,228	+		Pf1N1B4_1186	0.42	+1.1
1,337,228	+		Pf1N1B4_1186	0.42	-0.3
1,337,228	+		Pf1N1B4_1186	0.42	+0.4
1,337,229	-		Pf1N1B4_1186	0.42	-0.9
1,337,229	-		Pf1N1B4_1186	0.42	-1.7
1,337,229	-		Pf1N1B4_1186	0.42	-0.9
1,337,427	-		Pf1N1B4_1186	0.54	-0.2
1,337,427	-		Pf1N1B4_1186	0.54	+0.1
1,337,427	-		Pf1N1B4_1186	0.54	+0.8
1,337,427	-				-0.9
1,337,540	+		Pf1N1B4_1186	0.61	-0.4
1,337,540	+		Pf1N1B4_1186	0.61	-0.3
1,337,540	+		Pf1N1B4_1186	0.61	+0.1
1,337,540	+		Pf1N1B4_1186	0.61	-0.8
1,337,540	+		Pf1N1B4_1186	0.61	+1.1
1,337,540	+				-1.5
1,337,540	+		Pf1N1B4_1186	0.61	+1.1
1,337,540	+		Pf1N1B4_1186	0.61	-2.5
1,337,540	+		Pf1N1B4_1186	0.61	-0.8
1,337,540	+		Pf1N1B4_1186	0.61	-1.7
1,337,540	+		Pf1N1B4_1186	0.61	+0.1
1,337,540	+		Pf1N1B4_1186	0.61	-1.1
1,337,540	+		Pf1N1B4_1186	0.61	+0.7
1,337,540	+		Pf1N1B4_1186	0.61	-0.1
1,337,540	+		Pf1N1B4_1186	0.61	-0.5
1,337,541	-				+0.1
1,337,541	-		Pf1N1B4_1186	0.61	+0.5
1,337,541	-		Pf1N1B4_1186	0.61	-0.3
1,337,541	-		Pf1N1B4_1186	0.61	+0.1
1,337,541	-		Pf1N1B4_1186	0.61	+0.1
1,337,541	-		Pf1N1B4_1186	0.61	-1.5
1,337,541	-		Pf1N1B4_1186	0.61	-0.1
1,337,541	-		Pf1N1B4_1186	0.61	-0.1
1,337,541	-		Pf1N1B4_1186	0.61	+1.1
1,337,541	-		Pf1N1B4_1186	0.61	-0.5
1,337,541	-		Pf1N1B4_1186	0.61	-0.8
1,337,541	-		Pf1N1B4_1186	0.61	-1.5
1,337,541	-		Pf1N1B4_1186	0.61	-0.9
1,337,541	-		Pf1N1B4_1186	0.61	-0.2
1,337,541	-		Pf1N1B4_1186	0.61	+0.8
1,337,541	-		Pf1N1B4_1186	0.61	-1.1
1,337,541	-		Pf1N1B4_1186	0.61	+1.3
1,337,541	-		Pf1N1B4_1186	0.61	+0.1
1,337,541	-		Pf1N1B4_1186	0.61	+1.1
1,337,541	-		Pf1N1B4_1186	0.61	-0.9
1,337,541	-		Pf1N1B4_1186	0.61	-0.6
1,337,541	-		Pf1N1B4_1186	0.61	-1.5
1,337,541	-		Pf1N1B4_1186	0.61	-0.4
1,337,541	-		Pf1N1B4_1186	0.61	-0.9
1,337,541	-		Pf1N1B4_1186	0.61	+0.1
1,337,542	+				-1.5
1,337,542	+		Pf1N1B4_1186	0.61	-0.9
1,337,542	+		Pf1N1B4_1186	0.61	-0.9
1,337,543	-		Pf1N1B4_1186	0.61	+1.4
1,337,543	-		Pf1N1B4_1186	0.61	+0.9
1,337,543	-		Pf1N1B4_1186	0.61	+0.8
1,337,543	-		Pf1N1B4_1186	0.61	+2.1
1,337,543	-		Pf1N1B4_1186	0.61	-1.5
1,337,543	-		Pf1N1B4_1186	0.61	-1.9
1,337,753	+		Pf1N1B4_1186	0.73	+0.1
1,337,753	+		Pf1N1B4_1186	0.73	-0.5
1,337,753	+		Pf1N1B4_1186	0.73	+1.1
1,337,754	-		Pf1N1B4_1186	0.73	+1.1
1,337,786	-		Pf1N1B4_1186	0.75	+0.1
1,337,786	-		Pf1N1B4_1186	0.75	-0.9
1,337,816	+		Pf1N1B4_1186	0.77	-0.2
1,337,816	+		Pf1N1B4_1186	0.77	-1.5
1,337,817	-		Pf1N1B4_1186	0.77	-0.6
1,337,997	+		Pf1N1B4_1186	0.88	-0.3
1,337,997	+		Pf1N1B4_1186	0.88	-0.7
1,337,998	-		Pf1N1B4_1186	0.88	+0.7
1,337,998	-		Pf1N1B4_1186	0.88	+0.1
1,337,998	-		Pf1N1B4_1186	0.88	+0.8
1,337,998	-		Pf1N1B4_1186	0.88	+1.1
1,338,132	+				-1.0
1,338,203	+				+1.1
1,338,203	+				-1.7
1,338,203	+				-0.2
1,338,204	-				-1.9
1,338,204	-				+0.1
1,338,204	-				+2.4
1,338,211	-				-1.3
1,338,260	+				+1.1
1,338,260	+				-0.9
1,338,261	-				-0.9
1,338,303	+				-0.9
1,338,303	+				+0.1
1,338,303	+				+2.3
1,338,303	+				-0.8
1,338,303	+				-0.3
1,338,303	+				+0.4
1,338,303	+				+0.1
1,338,304	-				-1.9
1,338,304	-				-0.9
1,338,304	-				+0.1
1,338,304	-				+0.1
1,338,304	-				-0.9
1,338,304	-				+2.3
1,338,304	-				-0.3
1,338,305	+				+0.1
1,338,306	-				+1.4
1,338,306	-				+0.4
1,338,306	-				-1.0
1,338,306	-				-0.6
1,338,306	-				+1.3
1,338,373	-				-1.2
1,338,373	-				+0.1
1,338,429	+				-2.2
1,338,429	+				-0.5
1,338,456	+		Pf1N1B4_1187	0.12	+0.3
1,338,457	-		Pf1N1B4_1187	0.12	+1.1
1,338,585	+		Pf1N1B4_1187	0.28	-1.2
1,338,585	+		Pf1N1B4_1187	0.28	-1.1
1,338,586	-		Pf1N1B4_1187	0.28	+0.1
1,338,705	+		Pf1N1B4_1187	0.42	+0.1
1,338,705	+		Pf1N1B4_1187	0.42	+0.8
1,338,705	+		Pf1N1B4_1187	0.42	+0.4
1,338,706	-		Pf1N1B4_1187	0.42	+1.1
1,338,771	+		Pf1N1B4_1187	0.50	-1.4
1,338,771	+		Pf1N1B4_1187	0.50	+1.1
1,338,771	+				-0.6
1,338,771	+		Pf1N1B4_1187	0.50	-0.1
1,338,771	+		Pf1N1B4_1187	0.50	-0.5
1,338,772	-		Pf1N1B4_1187	0.50	+0.1
1,338,772	-		Pf1N1B4_1187	0.50	+0.4
1,338,772	-		Pf1N1B4_1187	0.50	+0.1
1,338,772	-		Pf1N1B4_1187	0.50	-1.0
1,338,772	-		Pf1N1B4_1187	0.50	+0.1
1,338,772	-		Pf1N1B4_1187	0.50	+0.7
1,338,772	-		Pf1N1B4_1187	0.50	-0.9
1,338,916	+		Pf1N1B4_1187	0.68	-0.5
1,338,916	+		Pf1N1B4_1187	0.68	-0.4
1,338,916	+		Pf1N1B4_1187	0.68	-0.3
1,338,916	+		Pf1N1B4_1187	0.68	+1.4
1,338,917	-		Pf1N1B4_1187	0.68	-0.9
1,338,941	+		Pf1N1B4_1187	0.71	-0.2
1,338,941	+		Pf1N1B4_1187	0.71	+0.7
1,338,942	-		Pf1N1B4_1187	0.71	-0.9
1,338,990	-		Pf1N1B4_1187	0.77	-1.1
1,338,990	-		Pf1N1B4_1187	0.77	+0.1
1,338,998	+		Pf1N1B4_1187	0.78	-1.5
1,338,998	+		Pf1N1B4_1187	0.78	+0.1
1,338,998	+		Pf1N1B4_1187	0.78	-0.3
1,338,998	+		Pf1N1B4_1187	0.78	+0.8
1,338,999	-		Pf1N1B4_1187	0.78	+0.1
1,338,999	-		Pf1N1B4_1187	0.78	+0.7
1,338,999	-		Pf1N1B4_1187	0.78	-0.5
1,339,195	+				+0.6
1,339,195	+				+1.3
1,339,196	+				-0.3
1,339,201	+				+0.8
1,339,202	-				-0.6