Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1014

Experiment: Carnitine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (N)
1,149,218	-		Pf1N1B4_1013	0.37	+0.3
1,149,345	+		Pf1N1B4_1013	0.46	-1.3
1,149,345	+		Pf1N1B4_1013	0.46	-1.0
1,149,345	+		Pf1N1B4_1013	0.46	+0.6
1,149,345	+		Pf1N1B4_1013	0.46	-1.5
1,149,345	+		Pf1N1B4_1013	0.46	-1.0
1,149,345	+		Pf1N1B4_1013	0.46	+0.3
1,149,345	+		Pf1N1B4_1013	0.46	+0.0
1,149,345	+		Pf1N1B4_1013	0.46	-0.5
1,149,345	+		Pf1N1B4_1013	0.46	-0.7
1,149,345	+		Pf1N1B4_1013	0.46	-1.3
1,149,346	-		Pf1N1B4_1013	0.46	-0.3
1,149,346	-		Pf1N1B4_1013	0.46	+0.0
1,149,346	-		Pf1N1B4_1013	0.46	-0.9
1,149,530	+		Pf1N1B4_1013	0.60	-1.3
1,149,573	+		Pf1N1B4_1013	0.63	+0.3
1,149,573	+		Pf1N1B4_1013	0.63	-0.2
1,149,573	+		Pf1N1B4_1013	0.63	-1.3
1,149,574	-		Pf1N1B4_1013	0.63	-1.2
1,149,613	+		Pf1N1B4_1013	0.66	+0.5
1,149,613	+		Pf1N1B4_1013	0.66	-0.3
1,149,613	+		Pf1N1B4_1013	0.66	+0.0
1,149,613	+		Pf1N1B4_1013	0.66	+0.0
1,149,614	-		Pf1N1B4_1013	0.66	+0.3
1,149,616	+		Pf1N1B4_1013	0.66	+0.2
1,149,616	+		Pf1N1B4_1013	0.66	+0.0
1,149,616	+		Pf1N1B4_1013	0.66	+0.8
1,149,616	+		Pf1N1B4_1013	0.66	-1.0
1,149,616	+		Pf1N1B4_1013	0.66	-1.0
1,149,616	+		Pf1N1B4_1013	0.66	+0.0
1,149,616	+		Pf1N1B4_1013	0.66	+1.0
1,149,616	+		Pf1N1B4_1013	0.66	+0.0
1,149,616	+		Pf1N1B4_1013	0.66	+1.6
1,149,616	+		Pf1N1B4_1013	0.66	-0.3
1,149,616	+		Pf1N1B4_1013	0.66	+1.2
1,149,616	+		Pf1N1B4_1013	0.66	-0.5
1,149,616	+		Pf1N1B4_1013	0.66	+2.0
1,149,617	-		Pf1N1B4_1013	0.66	+0.6
1,149,617	-		Pf1N1B4_1013	0.66	-1.0
1,149,788	+		Pf1N1B4_1013	0.79	+0.5
1,149,788	+		Pf1N1B4_1013	0.79	+0.4
1,149,788	+		Pf1N1B4_1013	0.79	-0.4
1,149,789	-		Pf1N1B4_1013	0.79	-0.8
1,149,972	+				+0.0
1,149,972	+				+0.3
1,149,972	+				+0.8
1,149,972	+				-1.0
1,149,972	+				-0.7
1,149,972	+				+0.0
1,149,973	-				+0.0
1,150,033	+				-1.0
1,150,033	+				-1.0
1,150,033	+				+0.4
1,150,033	+				-0.8
1,150,033	+				-0.1
1,150,033	+				-1.5
1,150,034	-				-0.4
1,150,108	+				+1.0
1,150,108	+				-1.0
1,150,109	-				-1.0
1,150,109	-				+0.9
1,150,109	-				-0.4
1,150,109	-				+0.5
1,150,109	-				-1.4
1,150,109	-				-2.3
1,150,128	+				-0.1
1,150,128	+				-0.3
1,150,128	+				+1.0
1,150,128	+				-0.4
1,150,129	-				+0.5
1,150,129	-				-1.0
1,150,132	-				-1.0
1,150,157	+				-0.5
1,150,157	+				-1.3
1,150,157	+				+0.0
1,150,157	+				+0.3
1,150,157	+				+1.5
1,150,157	+				-0.6
1,150,157	+				+0.0
1,150,157	+				-1.0
1,150,157	+				-1.0
1,150,157	+				-0.5
1,150,157	+				+0.4
1,150,157	+				+0.3
1,150,157	+				-1.0
1,150,157	+				-0.5
1,150,157	+				+0.3
1,150,157	+				-0.8
1,150,157	+				+0.6
1,150,158	-				-1.0
1,150,158	-				+0.0
1,150,158	-				+0.0
1,150,158	-				+0.5
1,150,158	-				-1.0
1,150,158	-				+1.6
1,150,158	-				-1.5
1,150,158	-				-0.3
1,150,158	-				-0.3
1,150,158	-				+0.0
1,150,158	-				-1.1
1,150,158	-				+0.0
1,150,158	-				+0.0
1,150,158	-				+1.0
1,150,158	-				+0.0
1,150,158	-				+0.0
1,150,158	-				-2.5
1,150,161	+				+0.3
1,150,161	+				+0.9
1,150,161	+				+0.6
1,150,161	+				+0.3
1,150,161	+				+1.0
1,150,162	-				-0.8
1,150,162	-				-0.4
1,150,162	-				+0.6
1,150,162	-				-0.4
1,150,162	-				-0.5
1,150,162	-				+0.6
1,150,162	-				-0.7
1,150,162	-				+0.0
1,150,162	-				-2.3
1,150,162	-				-1.0
1,150,187	+				+1.0
1,150,187	+				+2.0
1,150,187	+				+0.0
1,150,187	+				-1.1
1,150,188	-				-1.5
1,150,201	-				-0.5
1,150,201	-				-1.3
1,150,201	-				+0.0
1,150,201	-				-1.0
1,150,201	-				+0.4
1,150,201	-				+0.5
1,150,201	-				-1.0
1,150,211	+				-1.4
1,150,212	-				+1.4
1,150,261	+				+0.4
1,150,262	-				-0.7
1,150,262	-				-2.0
1,150,480	+		Pf1N1B4_1014	0.26	+0.0
1,150,480	+		Pf1N1B4_1014	0.26	+0.0
1,150,480	+		Pf1N1B4_1014	0.26	+0.4
1,150,481	-		Pf1N1B4_1014	0.26	+0.4
1,150,481	-		Pf1N1B4_1014	0.26	-0.8
1,150,513	+		Pf1N1B4_1014	0.28	+0.0
1,150,513	+		Pf1N1B4_1014	0.28	+1.5
1,150,513	+		Pf1N1B4_1014	0.28	+1.3
1,150,513	+		Pf1N1B4_1014	0.28	+0.0
1,150,514	-		Pf1N1B4_1014	0.28	+0.0
1,150,514	-		Pf1N1B4_1014	0.28	-2.3
1,151,029	+		Pf1N1B4_1014	0.68	-0.4
1,151,065	+		Pf1N1B4_1014	0.71	-2.1
1,151,066	-		Pf1N1B4_1014	0.71	-0.7
1,151,066	-		Pf1N1B4_1014	0.71	+0.6
1,151,119	+		Pf1N1B4_1014	0.75	+0.6
1,151,119	+		Pf1N1B4_1014	0.75	+0.0
1,151,119	+		Pf1N1B4_1014	0.75	-1.0
1,151,119	+		Pf1N1B4_1014	0.75	+0.6
1,151,120	-				-0.5
1,151,120	-		Pf1N1B4_1014	0.75	+1.6
1,151,120	-		Pf1N1B4_1014	0.75	+0.6
1,151,120	-		Pf1N1B4_1014	0.75	+1.0
1,151,120	-		Pf1N1B4_1014	0.75	-0.2
1,151,332	+				-0.5
1,151,332	+				+0.5
1,151,332	+				-1.0
1,151,332	+				-1.8
1,151,332	+				-1.0
1,151,332	+				-0.2
1,151,332	+				+0.5
1,151,333	-				-3.0
1,151,333	-				+2.0
1,151,431	+				+1.0
1,151,431	+				-1.3
1,151,431	+				+0.8
1,151,431	+				+0.4
1,151,548	+				+0.3
1,151,549	-				-1.8
1,151,571	+				-0.8
1,151,572	-				+0.6
1,151,621	+				+0.1
1,151,621	+				+1.6
1,151,629	+				-1.3
1,151,629	+				-1.9
1,151,629	+				-1.1
1,151,629	+				+0.4
1,151,629	+				+0.2
1,151,707	+				+1.6
1,151,729	+		Pf1N1B4_1015	0.14	+2.5
1,151,996	+				+1.6
1,151,996	+				+0.1
1,151,996	+				-0.9
1,151,997	-				+0.1
1,152,132	+		Pf1N1B4_1016	0.27	-0.9
1,152,146	+		Pf1N1B4_1016	0.30	-0.7
1,152,146	+		Pf1N1B4_1016	0.30	+0.5
1,152,146	+		Pf1N1B4_1016	0.30	+0.3
1,152,146	+		Pf1N1B4_1016	0.30	+0.1
1,152,146	+		Pf1N1B4_1016	0.30	+0.4
1,152,146	+		Pf1N1B4_1016	0.30	-1.5
1,152,146	+		Pf1N1B4_1016	0.30	-0.4
1,152,146	+		Pf1N1B4_1016	0.30	+0.0
1,152,146	+		Pf1N1B4_1016	0.30	+1.6
1,152,146	+		Pf1N1B4_1016	0.30	+0.5
1,152,146	+				+0.1
1,152,147	-		Pf1N1B4_1016	0.30	+0.5
1,152,147	-		Pf1N1B4_1016	0.30	-1.8
1,152,147	-		Pf1N1B4_1016	0.30	+0.1
1,152,147	-		Pf1N1B4_1016	0.30	+0.1
1,152,147	-		Pf1N1B4_1016	0.30	+0.5
1,152,224	+		Pf1N1B4_1016	0.46	-0.9
1,152,224	+		Pf1N1B4_1016	0.46	-0.6
1,152,224	+		Pf1N1B4_1016	0.46	+0.2
1,152,224	+				+2.1
1,152,224	+		Pf1N1B4_1016	0.46	-0.1
1,152,224	+		Pf1N1B4_1016	0.46	+0.5
1,152,224	+		Pf1N1B4_1016	0.46	-0.9
1,152,224	+		Pf1N1B4_1016	0.46	-2.5
1,152,224	+		Pf1N1B4_1016	0.46	-0.5
1,152,224	+		Pf1N1B4_1016	0.46	-0.2
1,152,225	-		Pf1N1B4_1016	0.46	+0.8
1,152,225	-		Pf1N1B4_1016	0.46	-0.4
1,152,225	-		Pf1N1B4_1016	0.46	+0.5
1,152,225	-		Pf1N1B4_1016	0.46	+0.9
1,152,225	-		Pf1N1B4_1016	0.46	-0.8
1,152,225	-		Pf1N1B4_1016	0.46	+0.5
1,152,225	-		Pf1N1B4_1016	0.46	+0.1
1,152,225	-		Pf1N1B4_1016	0.46	+0.6
1,152,225	-		Pf1N1B4_1016	0.46	-1.5
1,152,263	+		Pf1N1B4_1016	0.53	+0.3
1,152,263	+		Pf1N1B4_1016	0.53	+0.6
1,152,264	-		Pf1N1B4_1016	0.54	-1.2
1,152,283	+		Pf1N1B4_1016	0.57	+1.6
1,152,284	-		Pf1N1B4_1016	0.58	-0.5
1,152,293	+		Pf1N1B4_1016	0.59	-1.7
1,152,294	-		Pf1N1B4_1016	0.60	-1.9
1,152,294	-		Pf1N1B4_1016	0.60	-2.8
1,152,294	-		Pf1N1B4_1016	0.60	-1.3
1,152,294	-		Pf1N1B4_1016	0.60	-1.2
1,152,294	-		Pf1N1B4_1016	0.60	-0.9
1,152,294	-		Pf1N1B4_1016	0.60	-0.2
1,152,407	+		Pf1N1B4_1016	0.82	+0.5
1,152,408	-		Pf1N1B4_1016	0.82	+0.6