Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27795

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27790 and BWI76_RS27795 are separated by 9 nucleotidesBWI76_RS27795 and BWI76_RS27800 overlap by 4 nucleotidesBWI76_RS27800 and BWI76_RS27805 are separated by 301 nucleotides BWI76_RS27790: BWI76_RS27790 - MFS transporter family glucose-6-phosphate receptor UhpC, at 5,765,698 to 5,767,017 _RS27790 BWI76_RS27795: BWI76_RS27795 - two-component system sensor histidine kinase UhpB, at 5,767,027 to 5,768,529 _RS27795 BWI76_RS27800: BWI76_RS27800 - DNA-binding response regulator, at 5,768,526 to 5,769,119 _RS27800 BWI76_RS27805: BWI76_RS27805 - membrane protein, at 5,769,421 to 5,770,293 _RS27805 Position (kb) 5767 5768 5769Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 5766.187 kb on - strand, within BWI76_RS27790at 5766.227 kb on + strand, within BWI76_RS27790at 5766.227 kb on + strand, within BWI76_RS27790at 5766.235 kb on - strand, within BWI76_RS27790at 5766.237 kb on - strand, within BWI76_RS27790at 5766.307 kb on + strand, within BWI76_RS27790at 5766.307 kb on + strand, within BWI76_RS27790at 5766.308 kb on - strand, within BWI76_RS27790at 5766.462 kb on - strand, within BWI76_RS27790at 5766.536 kb on + strand, within BWI76_RS27790at 5766.544 kb on - strand, within BWI76_RS27790at 5766.546 kb on + strand, within BWI76_RS27790at 5766.640 kb on - strand, within BWI76_RS27790at 5766.641 kb on + strand, within BWI76_RS27790at 5766.649 kb on - strand, within BWI76_RS27790at 5766.687 kb on + strand, within BWI76_RS27790at 5766.780 kb on + strand, within BWI76_RS27790at 5766.788 kb on - strand, within BWI76_RS27790at 5766.788 kb on - strand, within BWI76_RS27790at 5766.791 kb on + strand, within BWI76_RS27790at 5766.791 kb on + strand, within BWI76_RS27790at 5766.799 kb on - strand, within BWI76_RS27790at 5766.837 kb on - strand, within BWI76_RS27790at 5766.897 kb on + strandat 5767.081 kb on - strandat 5767.089 kb on + strandat 5767.131 kb on + strandat 5767.131 kb on + strandat 5767.139 kb on - strandat 5767.155 kb on - strandat 5767.224 kb on - strand, within BWI76_RS27795at 5767.232 kb on + strand, within BWI76_RS27795at 5767.264 kb on - strand, within BWI76_RS27795at 5767.280 kb on + strandat 5767.298 kb on - strand, within BWI76_RS27795at 5767.415 kb on - strand, within BWI76_RS27795at 5767.596 kb on + strand, within BWI76_RS27795at 5767.634 kb on - strand, within BWI76_RS27795at 5767.697 kb on - strand, within BWI76_RS27795at 5767.814 kb on + strand, within BWI76_RS27795at 5767.856 kb on + strand, within BWI76_RS27795at 5767.861 kb on + strand, within BWI76_RS27795at 5767.943 kb on - strand, within BWI76_RS27795at 5767.949 kb on - strand, within BWI76_RS27795at 5768.058 kb on - strand, within BWI76_RS27795at 5768.104 kb on - strand, within BWI76_RS27795at 5768.381 kb on - strandat 5768.412 kb on + strandat 5768.558 kb on + strandat 5768.630 kb on + strand, within BWI76_RS27800at 5768.807 kb on + strand, within BWI76_RS27800at 5768.874 kb on + strand, within BWI76_RS27800at 5768.913 kb on - strand, within BWI76_RS27800at 5768.913 kb on - strand, within BWI76_RS27800at 5768.938 kb on + strand, within BWI76_RS27800at 5768.970 kb on + strand, within BWI76_RS27800at 5768.978 kb on - strand, within BWI76_RS27800at 5769.068 kb on - strandat 5769.079 kb on - strandat 5769.105 kb on - strandat 5769.108 kb on - strandat 5769.115 kb on + strandat 5769.123 kb on - strandat 5769.159 kb on + strandat 5769.159 kb on - strandat 5769.165 kb on - strandat 5769.167 kb on - strandat 5769.167 kb on - strandat 5769.167 kb on - strandat 5769.167 kb on - strandat 5769.167 kb on - strandat 5769.168 kb on - strandat 5769.168 kb on - strandat 5769.179 kb on + strandat 5769.181 kb on - strandat 5769.189 kb on + strandat 5769.192 kb on - strandat 5769.192 kb on - strandat 5769.194 kb on + strandat 5769.194 kb on + strandat 5769.194 kb on + strandat 5769.194 kb on + strandat 5769.197 kb on - strandat 5769.202 kb on + strandat 5769.202 kb on - strandat 5769.202 kb on - strandat 5769.204 kb on - strandat 5769.204 kb on - strandat 5769.209 kb on + strandat 5769.222 kb on - strandat 5769.236 kb on + strandat 5769.239 kb on + strandat 5769.244 kb on - strandat 5769.255 kb on - strandat 5769.273 kb on + strandat 5769.273 kb on + strandat 5769.281 kb on - strandat 5769.301 kb on - strandat 5769.301 kb on - strandat 5769.301 kb on - strandat 5769.364 kb on + strandat 5769.366 kb on + strandat 5769.378 kb on + strandat 5769.411 kb on + strandat 5769.436 kb on + strandat 5769.445 kb on + strandat 5769.495 kb on + strandat 5769.503 kb on - strandat 5769.510 kb on - strand, within BWI76_RS27805at 5769.519 kb on - strand, within BWI76_RS27805

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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5,766,187 - BWI76_RS27790 0.37 -1.8
5,766,227 + BWI76_RS27790 0.40 +1.1
5,766,227 + BWI76_RS27790 0.40 -1.0
5,766,235 - BWI76_RS27790 0.41 -1.7
5,766,237 - BWI76_RS27790 0.41 -1.4
5,766,307 + BWI76_RS27790 0.46 -2.4
5,766,307 + BWI76_RS27790 0.46 -1.1
5,766,308 - BWI76_RS27790 0.46 -1.9
5,766,462 - BWI76_RS27790 0.58 -0.8
5,766,536 + BWI76_RS27790 0.63 +0.2
5,766,544 - BWI76_RS27790 0.64 +0.7
5,766,546 + BWI76_RS27790 0.64 -1.4
5,766,640 - BWI76_RS27790 0.71 -0.7
5,766,641 + BWI76_RS27790 0.71 -0.0
5,766,649 - BWI76_RS27790 0.72 -0.8
5,766,687 + BWI76_RS27790 0.75 +0.5
5,766,780 + BWI76_RS27790 0.82 -1.4
5,766,788 - BWI76_RS27790 0.83 -1.2
5,766,788 - BWI76_RS27790 0.83 -2.3
5,766,791 + BWI76_RS27790 0.83 -1.3
5,766,791 + BWI76_RS27790 0.83 +0.4
5,766,799 - BWI76_RS27790 0.83 -2.2
5,766,837 - BWI76_RS27790 0.86 -0.3
5,766,897 + +0.6
5,767,081 - -3.4
5,767,089 + -0.3
5,767,131 + -1.7
5,767,131 + -1.3
5,767,139 - +0.1
5,767,155 - -1.4
5,767,224 - BWI76_RS27795 0.13 -0.4
5,767,232 + BWI76_RS27795 0.14 -1.0
5,767,264 - BWI76_RS27795 0.16 -2.0
5,767,280 + +1.1
5,767,298 - BWI76_RS27795 0.18 -0.4
5,767,415 - BWI76_RS27795 0.26 -3.0
5,767,596 + BWI76_RS27795 0.38 +1.1
5,767,634 - BWI76_RS27795 0.40 -2.0
5,767,697 - BWI76_RS27795 0.45 -1.4
5,767,814 + BWI76_RS27795 0.52 -1.1
5,767,856 + BWI76_RS27795 0.55 -0.8
5,767,861 + BWI76_RS27795 0.55 -0.4
5,767,943 - BWI76_RS27795 0.61 -0.7
5,767,949 - BWI76_RS27795 0.61 +1.1
5,768,058 - BWI76_RS27795 0.69 -1.2
5,768,104 - BWI76_RS27795 0.72 -2.3
5,768,381 - -0.1
5,768,412 + -1.1
5,768,558 + -1.0
5,768,630 + BWI76_RS27800 0.18 -1.1
5,768,807 + BWI76_RS27800 0.47 -1.2
5,768,874 + BWI76_RS27800 0.59 -1.9
5,768,913 - BWI76_RS27800 0.65 -1.4
5,768,913 - BWI76_RS27800 0.65 -0.2
5,768,938 + BWI76_RS27800 0.69 -1.3
5,768,970 + BWI76_RS27800 0.75 -1.2
5,768,978 - BWI76_RS27800 0.76 -0.0
5,769,068 - -1.0
5,769,079 - +0.3
5,769,105 - -2.1
5,769,108 - -0.4
5,769,115 + -2.0
5,769,123 - -0.6
5,769,159 + -1.1
5,769,159 - +0.5
5,769,165 - -0.2
5,769,167 - -1.9
5,769,167 - -2.3
5,769,167 - -1.4
5,769,167 - +0.2
5,769,167 - -0.1
5,769,168 - -0.2
5,769,168 - +0.1
5,769,179 + -1.3
5,769,181 - +1.3
5,769,189 + +0.0
5,769,192 - +1.6
5,769,192 - -1.2
5,769,194 + -0.0
5,769,194 + -0.3
5,769,194 + +1.4
5,769,194 + +2.3
5,769,197 - +0.4
5,769,202 + -0.2
5,769,202 - -0.4
5,769,202 - +0.6
5,769,204 - +0.6
5,769,204 - +0.1
5,769,209 + -1.2
5,769,222 - -1.2
5,769,236 + +0.6
5,769,239 + +1.4
5,769,244 - +0.2
5,769,255 - +1.6
5,769,273 + +0.1
5,769,273 + +0.2
5,769,281 - +0.6
5,769,301 - +0.8
5,769,301 - -0.4
5,769,301 - -0.8
5,769,364 + +0.7
5,769,366 + +0.3
5,769,378 + +0.7
5,769,411 + -1.7
5,769,436 + -0.3
5,769,445 + +0.8
5,769,495 + +1.1
5,769,503 - +0.3
5,769,510 - BWI76_RS27805 0.10 +0.7
5,769,519 - BWI76_RS27805 0.11 -0.1

Or see this region's nucleotide sequence