Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27785 and BWI76_RS27790 are separated by 145 nucleotides BWI76_RS27790 and BWI76_RS27795 are separated by 9 nucleotides
BWI76_RS27785: BWI76_RS27785 - hexose-6-phosphate transporter; deoxyribose-5-phosphate or dAMP transporter (from data) , at 5,764,161 to 5,765,552
_RS27785
BWI76_RS27790: BWI76_RS27790 - MFS transporter family glucose-6-phosphate receptor UhpC, at 5,765,698 to 5,767,017
_RS27790
BWI76_RS27795: BWI76_RS27795 - two-component system sensor histidine kinase UhpB, at 5,767,027 to 5,768,529
_RS27795
Position (kb)
5765
5766
5767
5768 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5764.710 kb on + strand, within BWI76_RS27785 at 5764.845 kb on - strand, within BWI76_RS27785 at 5765.013 kb on - strand, within BWI76_RS27785 at 5765.077 kb on + strand, within BWI76_RS27785 at 5765.129 kb on + strand, within BWI76_RS27785 at 5765.129 kb on + strand, within BWI76_RS27785 at 5765.161 kb on + strand, within BWI76_RS27785 at 5765.188 kb on - strand, within BWI76_RS27785 at 5765.257 kb on + strand, within BWI76_RS27785 at 5765.257 kb on + strand, within BWI76_RS27785 at 5765.262 kb on + strand, within BWI76_RS27785 at 5765.315 kb on + strand, within BWI76_RS27785 at 5765.315 kb on + strand, within BWI76_RS27785 at 5765.323 kb on - strand at 5765.401 kb on + strand, within BWI76_RS27785 at 5765.455 kb on + strand at 5765.463 kb on - strand at 5765.510 kb on + strand at 5765.516 kb on + strand at 5765.516 kb on + strand at 5765.518 kb on - strand at 5765.519 kb on - strand at 5765.519 kb on - strand at 5765.542 kb on - strand at 5765.542 kb on - strand at 5765.563 kb on + strand at 5765.563 kb on + strand at 5765.571 kb on - strand at 5765.573 kb on + strand at 5765.697 kb on + strand at 5766.187 kb on - strand, within BWI76_RS27790 at 5766.227 kb on + strand, within BWI76_RS27790 at 5766.227 kb on + strand, within BWI76_RS27790 at 5766.235 kb on - strand, within BWI76_RS27790 at 5766.237 kb on - strand, within BWI76_RS27790 at 5766.307 kb on + strand, within BWI76_RS27790 at 5766.307 kb on + strand, within BWI76_RS27790 at 5766.308 kb on - strand, within BWI76_RS27790 at 5766.462 kb on - strand, within BWI76_RS27790 at 5766.536 kb on + strand, within BWI76_RS27790 at 5766.544 kb on - strand, within BWI76_RS27790 at 5766.546 kb on + strand, within BWI76_RS27790 at 5766.640 kb on - strand, within BWI76_RS27790 at 5766.641 kb on + strand, within BWI76_RS27790 at 5766.649 kb on - strand, within BWI76_RS27790 at 5766.687 kb on + strand, within BWI76_RS27790 at 5766.780 kb on + strand, within BWI76_RS27790 at 5766.788 kb on - strand, within BWI76_RS27790 at 5766.788 kb on - strand, within BWI76_RS27790 at 5766.791 kb on + strand, within BWI76_RS27790 at 5766.791 kb on + strand, within BWI76_RS27790 at 5766.799 kb on - strand, within BWI76_RS27790 at 5766.837 kb on - strand, within BWI76_RS27790 at 5766.897 kb on + strand at 5767.081 kb on - strand at 5767.089 kb on + strand at 5767.131 kb on + strand at 5767.131 kb on + strand at 5767.139 kb on - strand at 5767.155 kb on - strand at 5767.224 kb on - strand, within BWI76_RS27795 at 5767.232 kb on + strand, within BWI76_RS27795 at 5767.264 kb on - strand, within BWI76_RS27795 at 5767.280 kb on + strand at 5767.298 kb on - strand, within BWI76_RS27795 at 5767.415 kb on - strand, within BWI76_RS27795 at 5767.596 kb on + strand, within BWI76_RS27795 at 5767.634 kb on - strand, within BWI76_RS27795 at 5767.697 kb on - strand, within BWI76_RS27795 at 5767.814 kb on + strand, within BWI76_RS27795 at 5767.856 kb on + strand, within BWI76_RS27795 at 5767.861 kb on + strand, within BWI76_RS27795 at 5767.943 kb on - strand, within BWI76_RS27795 at 5767.949 kb on - strand, within BWI76_RS27795
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 5,764,710 + BWI76_RS27785 0.39 +1.1 5,764,845 - BWI76_RS27785 0.49 -1.7 5,765,013 - BWI76_RS27785 0.61 +0.3 5,765,077 + BWI76_RS27785 0.66 -0.9 5,765,129 + BWI76_RS27785 0.70 -0.1 5,765,129 + BWI76_RS27785 0.70 -0.6 5,765,161 + BWI76_RS27785 0.72 -2.4 5,765,188 - BWI76_RS27785 0.74 -1.0 5,765,257 + BWI76_RS27785 0.79 -0.1 5,765,257 + BWI76_RS27785 0.79 +0.1 5,765,262 + BWI76_RS27785 0.79 -0.6 5,765,315 + BWI76_RS27785 0.83 -0.8 5,765,315 + BWI76_RS27785 0.83 -1.2 5,765,323 - +2.1 5,765,401 + BWI76_RS27785 0.89 -1.2 5,765,455 + -0.3 5,765,463 - -1.4 5,765,510 + -1.0 5,765,516 + -3.6 5,765,516 + -0.6 5,765,518 - -1.0 5,765,519 - -1.6 5,765,519 - -0.8 5,765,542 - -0.9 5,765,542 - -2.7 5,765,563 + -1.2 5,765,563 + +0.0 5,765,571 - -0.4 5,765,573 + +0.6 5,765,697 + +0.2 5,766,187 - BWI76_RS27790 0.37 -1.8 5,766,227 + BWI76_RS27790 0.40 +1.1 5,766,227 + BWI76_RS27790 0.40 -1.0 5,766,235 - BWI76_RS27790 0.41 -1.7 5,766,237 - BWI76_RS27790 0.41 -1.4 5,766,307 + BWI76_RS27790 0.46 -2.4 5,766,307 + BWI76_RS27790 0.46 -1.1 5,766,308 - BWI76_RS27790 0.46 -1.9 5,766,462 - BWI76_RS27790 0.58 -0.8 5,766,536 + BWI76_RS27790 0.63 +0.2 5,766,544 - BWI76_RS27790 0.64 +0.7 5,766,546 + BWI76_RS27790 0.64 -1.4 5,766,640 - BWI76_RS27790 0.71 -0.7 5,766,641 + BWI76_RS27790 0.71 -0.0 5,766,649 - BWI76_RS27790 0.72 -0.8 5,766,687 + BWI76_RS27790 0.75 +0.5 5,766,780 + BWI76_RS27790 0.82 -1.4 5,766,788 - BWI76_RS27790 0.83 -1.2 5,766,788 - BWI76_RS27790 0.83 -2.3 5,766,791 + BWI76_RS27790 0.83 -1.3 5,766,791 + BWI76_RS27790 0.83 +0.4 5,766,799 - BWI76_RS27790 0.83 -2.2 5,766,837 - BWI76_RS27790 0.86 -0.3 5,766,897 + +0.6 5,767,081 - -3.4 5,767,089 + -0.3 5,767,131 + -1.7 5,767,131 + -1.3 5,767,139 - +0.1 5,767,155 - -1.4 5,767,224 - BWI76_RS27795 0.13 -0.4 5,767,232 + BWI76_RS27795 0.14 -1.0 5,767,264 - BWI76_RS27795 0.16 -2.0 5,767,280 + +1.1 5,767,298 - BWI76_RS27795 0.18 -0.4 5,767,415 - BWI76_RS27795 0.26 -3.0 5,767,596 + BWI76_RS27795 0.38 +1.1 5,767,634 - BWI76_RS27795 0.40 -2.0 5,767,697 - BWI76_RS27795 0.45 -1.4 5,767,814 + BWI76_RS27795 0.52 -1.1 5,767,856 + BWI76_RS27795 0.55 -0.8 5,767,861 + BWI76_RS27795 0.55 -0.4 5,767,943 - BWI76_RS27795 0.61 -0.7 5,767,949 - BWI76_RS27795 0.61 +1.1
Or see this region's nucleotide sequence