Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27790

Experiment: D-Glucose-6-Phosphate (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS27785 and BWI76_RS27790 are separated by 145 nucleotidesBWI76_RS27790 and BWI76_RS27795 are separated by 9 nucleotides BWI76_RS27785: BWI76_RS27785 - hexose-6-phosphate transporter; deoxyribose-5-phosphate or dAMP transporter (from data), at 5,764,161 to 5,765,552 _RS27785 BWI76_RS27790: BWI76_RS27790 - MFS transporter family glucose-6-phosphate receptor UhpC, at 5,765,698 to 5,767,017 _RS27790 BWI76_RS27795: BWI76_RS27795 - two-component system sensor histidine kinase UhpB, at 5,767,027 to 5,768,529 _RS27795 Position (kb) 5765 5766 5767 5768Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 5764.710 kb on + strand, within BWI76_RS27785at 5764.845 kb on - strand, within BWI76_RS27785at 5765.013 kb on - strand, within BWI76_RS27785at 5765.077 kb on + strand, within BWI76_RS27785at 5765.129 kb on + strand, within BWI76_RS27785at 5765.129 kb on + strand, within BWI76_RS27785at 5765.161 kb on + strand, within BWI76_RS27785at 5765.188 kb on - strand, within BWI76_RS27785at 5765.257 kb on + strand, within BWI76_RS27785at 5765.257 kb on + strand, within BWI76_RS27785at 5765.262 kb on + strand, within BWI76_RS27785at 5765.315 kb on + strand, within BWI76_RS27785at 5765.315 kb on + strand, within BWI76_RS27785at 5765.323 kb on - strandat 5765.401 kb on + strand, within BWI76_RS27785at 5765.455 kb on + strandat 5765.463 kb on - strandat 5765.510 kb on + strandat 5765.516 kb on + strandat 5765.516 kb on + strandat 5765.518 kb on - strandat 5765.519 kb on - strandat 5765.519 kb on - strandat 5765.542 kb on - strandat 5765.542 kb on - strandat 5765.563 kb on + strandat 5765.563 kb on + strandat 5765.571 kb on - strandat 5765.573 kb on + strandat 5765.697 kb on + strandat 5766.187 kb on - strand, within BWI76_RS27790at 5766.227 kb on + strand, within BWI76_RS27790at 5766.227 kb on + strand, within BWI76_RS27790at 5766.235 kb on - strand, within BWI76_RS27790at 5766.237 kb on - strand, within BWI76_RS27790at 5766.307 kb on + strand, within BWI76_RS27790at 5766.307 kb on + strand, within BWI76_RS27790at 5766.308 kb on - strand, within BWI76_RS27790at 5766.462 kb on - strand, within BWI76_RS27790at 5766.536 kb on + strand, within BWI76_RS27790at 5766.544 kb on - strand, within BWI76_RS27790at 5766.546 kb on + strand, within BWI76_RS27790at 5766.640 kb on - strand, within BWI76_RS27790at 5766.641 kb on + strand, within BWI76_RS27790at 5766.649 kb on - strand, within BWI76_RS27790at 5766.687 kb on + strand, within BWI76_RS27790at 5766.780 kb on + strand, within BWI76_RS27790at 5766.788 kb on - strand, within BWI76_RS27790at 5766.788 kb on - strand, within BWI76_RS27790at 5766.791 kb on + strand, within BWI76_RS27790at 5766.791 kb on + strand, within BWI76_RS27790at 5766.799 kb on - strand, within BWI76_RS27790at 5766.837 kb on - strand, within BWI76_RS27790at 5766.897 kb on + strandat 5767.081 kb on - strandat 5767.089 kb on + strandat 5767.131 kb on + strandat 5767.131 kb on + strandat 5767.139 kb on - strandat 5767.155 kb on - strandat 5767.224 kb on - strand, within BWI76_RS27795at 5767.232 kb on + strand, within BWI76_RS27795at 5767.264 kb on - strand, within BWI76_RS27795at 5767.280 kb on + strandat 5767.298 kb on - strand, within BWI76_RS27795at 5767.415 kb on - strand, within BWI76_RS27795at 5767.596 kb on + strand, within BWI76_RS27795at 5767.634 kb on - strand, within BWI76_RS27795at 5767.697 kb on - strand, within BWI76_RS27795at 5767.814 kb on + strand, within BWI76_RS27795at 5767.856 kb on + strand, within BWI76_RS27795at 5767.861 kb on + strand, within BWI76_RS27795at 5767.943 kb on - strand, within BWI76_RS27795at 5767.949 kb on - strand, within BWI76_RS27795

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
remove
5,764,710 + BWI76_RS27785 0.39 +1.1
5,764,845 - BWI76_RS27785 0.49 -1.7
5,765,013 - BWI76_RS27785 0.61 +0.3
5,765,077 + BWI76_RS27785 0.66 -0.9
5,765,129 + BWI76_RS27785 0.70 -0.1
5,765,129 + BWI76_RS27785 0.70 -0.6
5,765,161 + BWI76_RS27785 0.72 -2.4
5,765,188 - BWI76_RS27785 0.74 -1.0
5,765,257 + BWI76_RS27785 0.79 -0.1
5,765,257 + BWI76_RS27785 0.79 +0.1
5,765,262 + BWI76_RS27785 0.79 -0.6
5,765,315 + BWI76_RS27785 0.83 -0.8
5,765,315 + BWI76_RS27785 0.83 -1.2
5,765,323 - +2.1
5,765,401 + BWI76_RS27785 0.89 -1.2
5,765,455 + -0.3
5,765,463 - -1.4
5,765,510 + -1.0
5,765,516 + -3.6
5,765,516 + -0.6
5,765,518 - -1.0
5,765,519 - -1.6
5,765,519 - -0.8
5,765,542 - -0.9
5,765,542 - -2.7
5,765,563 + -1.2
5,765,563 + +0.0
5,765,571 - -0.4
5,765,573 + +0.6
5,765,697 + +0.2
5,766,187 - BWI76_RS27790 0.37 -1.8
5,766,227 + BWI76_RS27790 0.40 +1.1
5,766,227 + BWI76_RS27790 0.40 -1.0
5,766,235 - BWI76_RS27790 0.41 -1.7
5,766,237 - BWI76_RS27790 0.41 -1.4
5,766,307 + BWI76_RS27790 0.46 -2.4
5,766,307 + BWI76_RS27790 0.46 -1.1
5,766,308 - BWI76_RS27790 0.46 -1.9
5,766,462 - BWI76_RS27790 0.58 -0.8
5,766,536 + BWI76_RS27790 0.63 +0.2
5,766,544 - BWI76_RS27790 0.64 +0.7
5,766,546 + BWI76_RS27790 0.64 -1.4
5,766,640 - BWI76_RS27790 0.71 -0.7
5,766,641 + BWI76_RS27790 0.71 -0.0
5,766,649 - BWI76_RS27790 0.72 -0.8
5,766,687 + BWI76_RS27790 0.75 +0.5
5,766,780 + BWI76_RS27790 0.82 -1.4
5,766,788 - BWI76_RS27790 0.83 -1.2
5,766,788 - BWI76_RS27790 0.83 -2.3
5,766,791 + BWI76_RS27790 0.83 -1.3
5,766,791 + BWI76_RS27790 0.83 +0.4
5,766,799 - BWI76_RS27790 0.83 -2.2
5,766,837 - BWI76_RS27790 0.86 -0.3
5,766,897 + +0.6
5,767,081 - -3.4
5,767,089 + -0.3
5,767,131 + -1.7
5,767,131 + -1.3
5,767,139 - +0.1
5,767,155 - -1.4
5,767,224 - BWI76_RS27795 0.13 -0.4
5,767,232 + BWI76_RS27795 0.14 -1.0
5,767,264 - BWI76_RS27795 0.16 -2.0
5,767,280 + +1.1
5,767,298 - BWI76_RS27795 0.18 -0.4
5,767,415 - BWI76_RS27795 0.26 -3.0
5,767,596 + BWI76_RS27795 0.38 +1.1
5,767,634 - BWI76_RS27795 0.40 -2.0
5,767,697 - BWI76_RS27795 0.45 -1.4
5,767,814 + BWI76_RS27795 0.52 -1.1
5,767,856 + BWI76_RS27795 0.55 -0.8
5,767,861 + BWI76_RS27795 0.55 -0.4
5,767,943 - BWI76_RS27795 0.61 -0.7
5,767,949 - BWI76_RS27795 0.61 +1.1

Or see this region's nucleotide sequence