Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27785

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27775 and BWI76_RS27780 are separated by 84 nucleotidesBWI76_RS27780 and BWI76_RS27785 are separated by 211 nucleotidesBWI76_RS27785 and BWI76_RS27790 are separated by 145 nucleotides BWI76_RS27775: BWI76_RS27775 - transcriptional regulator, at 5,763,089 to 5,763,412 _RS27775 BWI76_RS27780: BWI76_RS27780 - hypothetical protein, at 5,763,497 to 5,763,949 _RS27780 BWI76_RS27785: BWI76_RS27785 - hexose-6-phosphate transporter; deoxyribose-5-phosphate or dAMP transporter (from data), at 5,764,161 to 5,765,552 _RS27785 BWI76_RS27790: BWI76_RS27790 - MFS transporter family glucose-6-phosphate receptor UhpC, at 5,765,698 to 5,767,017 _RS27790 Position (kb) 5764 5765 5766Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 5763.401 kb on - strandat 5763.417 kb on + strandat 5763.417 kb on + strandat 5763.453 kb on - strandat 5763.471 kb on + strandat 5763.550 kb on + strand, within BWI76_RS27780at 5763.763 kb on + strand, within BWI76_RS27780at 5763.942 kb on - strandat 5763.942 kb on - strandat 5764.074 kb on - strandat 5764.095 kb on - strandat 5764.095 kb on - strandat 5764.158 kb on + strandat 5764.177 kb on + strandat 5764.279 kb on - strandat 5764.387 kb on - strand, within BWI76_RS27785at 5764.473 kb on - strand, within BWI76_RS27785at 5764.571 kb on - strand, within BWI76_RS27785at 5764.646 kb on + strand, within BWI76_RS27785at 5764.710 kb on + strand, within BWI76_RS27785at 5764.845 kb on - strand, within BWI76_RS27785at 5765.013 kb on - strand, within BWI76_RS27785at 5765.077 kb on + strand, within BWI76_RS27785at 5765.129 kb on + strand, within BWI76_RS27785at 5765.129 kb on + strand, within BWI76_RS27785at 5765.161 kb on + strand, within BWI76_RS27785at 5765.188 kb on - strand, within BWI76_RS27785at 5765.257 kb on + strand, within BWI76_RS27785at 5765.257 kb on + strand, within BWI76_RS27785at 5765.262 kb on + strand, within BWI76_RS27785at 5765.315 kb on + strand, within BWI76_RS27785at 5765.315 kb on + strand, within BWI76_RS27785at 5765.323 kb on - strandat 5765.401 kb on + strand, within BWI76_RS27785at 5765.455 kb on + strandat 5765.463 kb on - strandat 5765.510 kb on + strandat 5765.516 kb on + strandat 5765.516 kb on + strandat 5765.518 kb on - strandat 5765.519 kb on - strandat 5765.519 kb on - strandat 5765.542 kb on - strandat 5765.542 kb on - strandat 5765.563 kb on + strandat 5765.563 kb on + strandat 5765.571 kb on - strandat 5765.573 kb on + strandat 5765.697 kb on + strandat 5766.187 kb on - strand, within BWI76_RS27790at 5766.227 kb on + strand, within BWI76_RS27790at 5766.227 kb on + strand, within BWI76_RS27790at 5766.235 kb on - strand, within BWI76_RS27790at 5766.237 kb on - strand, within BWI76_RS27790at 5766.307 kb on + strand, within BWI76_RS27790at 5766.307 kb on + strand, within BWI76_RS27790at 5766.308 kb on - strand, within BWI76_RS27790at 5766.462 kb on - strand, within BWI76_RS27790at 5766.536 kb on + strand, within BWI76_RS27790at 5766.544 kb on - strand, within BWI76_RS27790at 5766.546 kb on + strand, within BWI76_RS27790

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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5,763,401 - +1.6
5,763,417 + -0.7
5,763,417 + -0.9
5,763,453 - +2.0
5,763,471 + -0.4
5,763,550 + BWI76_RS27780 0.12 -2.3
5,763,763 + BWI76_RS27780 0.59 -1.3
5,763,942 - -0.6
5,763,942 - +1.9
5,764,074 - -0.2
5,764,095 - +1.3
5,764,095 - -0.4
5,764,158 + -0.6
5,764,177 + -1.0
5,764,279 - -2.6
5,764,387 - BWI76_RS27785 0.16 +0.1
5,764,473 - BWI76_RS27785 0.22 -1.4
5,764,571 - BWI76_RS27785 0.29 -2.1
5,764,646 + BWI76_RS27785 0.35 -2.7
5,764,710 + BWI76_RS27785 0.39 +1.1
5,764,845 - BWI76_RS27785 0.49 -1.7
5,765,013 - BWI76_RS27785 0.61 +0.3
5,765,077 + BWI76_RS27785 0.66 -0.9
5,765,129 + BWI76_RS27785 0.70 -0.1
5,765,129 + BWI76_RS27785 0.70 -0.6
5,765,161 + BWI76_RS27785 0.72 -2.4
5,765,188 - BWI76_RS27785 0.74 -1.0
5,765,257 + BWI76_RS27785 0.79 -0.1
5,765,257 + BWI76_RS27785 0.79 +0.1
5,765,262 + BWI76_RS27785 0.79 -0.6
5,765,315 + BWI76_RS27785 0.83 -0.8
5,765,315 + BWI76_RS27785 0.83 -1.2
5,765,323 - +2.1
5,765,401 + BWI76_RS27785 0.89 -1.2
5,765,455 + -0.3
5,765,463 - -1.4
5,765,510 + -1.0
5,765,516 + -3.6
5,765,516 + -0.6
5,765,518 - -1.0
5,765,519 - -1.6
5,765,519 - -0.8
5,765,542 - -0.9
5,765,542 - -2.7
5,765,563 + -1.2
5,765,563 + +0.0
5,765,571 - -0.4
5,765,573 + +0.6
5,765,697 + +0.2
5,766,187 - BWI76_RS27790 0.37 -1.8
5,766,227 + BWI76_RS27790 0.40 +1.1
5,766,227 + BWI76_RS27790 0.40 -1.0
5,766,235 - BWI76_RS27790 0.41 -1.7
5,766,237 - BWI76_RS27790 0.41 -1.4
5,766,307 + BWI76_RS27790 0.46 -2.4
5,766,307 + BWI76_RS27790 0.46 -1.1
5,766,308 - BWI76_RS27790 0.46 -1.9
5,766,462 - BWI76_RS27790 0.58 -0.8
5,766,536 + BWI76_RS27790 0.63 +0.2
5,766,544 - BWI76_RS27790 0.64 +0.7
5,766,546 + BWI76_RS27790 0.64 -1.4

Or see this region's nucleotide sequence