Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27780

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27765 and BWI76_RS27770 are separated by 212 nucleotidesBWI76_RS27770 and BWI76_RS27775 overlap by 17 nucleotidesBWI76_RS27775 and BWI76_RS27780 are separated by 84 nucleotidesBWI76_RS27780 and BWI76_RS27785 are separated by 211 nucleotides BWI76_RS27765: BWI76_RS27765 - MFS transporter, at 5,761,352 to 5,762,533 _RS27765 BWI76_RS27770: BWI76_RS27770 - hypothetical protein, at 5,762,746 to 5,763,105 _RS27770 BWI76_RS27775: BWI76_RS27775 - transcriptional regulator, at 5,763,089 to 5,763,412 _RS27775 BWI76_RS27780: BWI76_RS27780 - hypothetical protein, at 5,763,497 to 5,763,949 _RS27780 BWI76_RS27785: BWI76_RS27785 - hexose-6-phosphate transporter; deoxyribose-5-phosphate or dAMP transporter (from data), at 5,764,161 to 5,765,552 _RS27785 Position (kb) 5763 5764Strain fitness (log2 ratio) -2 -1 0 1 2at 5762.536 kb on - strandat 5762.536 kb on - strandat 5762.784 kb on - strand, within BWI76_RS27770at 5762.856 kb on - strand, within BWI76_RS27770at 5762.863 kb on - strand, within BWI76_RS27770at 5762.932 kb on + strand, within BWI76_RS27770at 5762.932 kb on - strand, within BWI76_RS27770at 5762.959 kb on + strand, within BWI76_RS27770at 5763.089 kb on - strandat 5763.131 kb on + strand, within BWI76_RS27775at 5763.401 kb on - strandat 5763.417 kb on + strandat 5763.417 kb on + strandat 5763.453 kb on - strandat 5763.471 kb on + strandat 5763.550 kb on + strand, within BWI76_RS27780at 5763.763 kb on + strand, within BWI76_RS27780at 5763.942 kb on - strandat 5763.942 kb on - strandat 5764.074 kb on - strandat 5764.095 kb on - strandat 5764.095 kb on - strandat 5764.158 kb on + strandat 5764.177 kb on + strandat 5764.279 kb on - strandat 5764.387 kb on - strand, within BWI76_RS27785at 5764.473 kb on - strand, within BWI76_RS27785at 5764.571 kb on - strand, within BWI76_RS27785at 5764.646 kb on + strand, within BWI76_RS27785at 5764.710 kb on + strand, within BWI76_RS27785at 5764.845 kb on - strand, within BWI76_RS27785

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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5,762,536 - +0.2
5,762,536 - +0.3
5,762,784 - BWI76_RS27770 0.11 +0.7
5,762,856 - BWI76_RS27770 0.31 +0.4
5,762,863 - BWI76_RS27770 0.33 -1.2
5,762,932 + BWI76_RS27770 0.52 -0.1
5,762,932 - BWI76_RS27770 0.52 +0.1
5,762,959 + BWI76_RS27770 0.59 -1.1
5,763,089 - -1.2
5,763,131 + BWI76_RS27775 0.13 -0.9
5,763,401 - +1.6
5,763,417 + -0.7
5,763,417 + -0.9
5,763,453 - +2.0
5,763,471 + -0.4
5,763,550 + BWI76_RS27780 0.12 -2.3
5,763,763 + BWI76_RS27780 0.59 -1.3
5,763,942 - -0.6
5,763,942 - +1.9
5,764,074 - -0.2
5,764,095 - +1.3
5,764,095 - -0.4
5,764,158 + -0.6
5,764,177 + -1.0
5,764,279 - -2.6
5,764,387 - BWI76_RS27785 0.16 +0.1
5,764,473 - BWI76_RS27785 0.22 -1.4
5,764,571 - BWI76_RS27785 0.29 -2.1
5,764,646 + BWI76_RS27785 0.35 -2.7
5,764,710 + BWI76_RS27785 0.39 +1.1
5,764,845 - BWI76_RS27785 0.49 -1.7

Or see this region's nucleotide sequence