Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20695

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS20690 and BWI76_RS20695 overlap by 11 nucleotidesBWI76_RS20695 and BWI76_RS20700 overlap by 1 nucleotidesBWI76_RS20700 and BWI76_RS20705 overlap by 1 nucleotides BWI76_RS20690: BWI76_RS20690 - sulfate ABC transporter ATP-binding protein, at 4,327,867 to 4,328,961 _RS20690 BWI76_RS20695: BWI76_RS20695 - sulfate/thiosulfate transporter permease subunit, at 4,328,951 to 4,329,826 _RS20695 BWI76_RS20700: BWI76_RS20700 - sulfate/thiosulfate transporter subunit, at 4,329,826 to 4,330,659 _RS20700 BWI76_RS20705: BWI76_RS20705 - thiosulfate transporter subunit, at 4,330,659 to 4,331,675 _RS20705 Position (kb) 4328 4329 4330Strain fitness (log2 ratio) -2 -1 0 1at 4327.979 kb on + strand, within BWI76_RS20690at 4328.069 kb on + strand, within BWI76_RS20690at 4328.214 kb on - strand, within BWI76_RS20690at 4328.633 kb on + strand, within BWI76_RS20690at 4328.766 kb on + strand, within BWI76_RS20690at 4328.766 kb on + strand, within BWI76_RS20690at 4328.785 kb on + strand, within BWI76_RS20690at 4328.885 kb on - strandat 4328.914 kb on - strandat 4329.541 kb on - strand, within BWI76_RS20695at 4329.542 kb on + strand, within BWI76_RS20695at 4329.550 kb on - strand, within BWI76_RS20695at 4329.748 kb on + strandat 4329.874 kb on - strandat 4330.165 kb on + strand, within BWI76_RS20700at 4330.224 kb on - strand, within BWI76_RS20700at 4330.325 kb on - strand, within BWI76_RS20700at 4330.512 kb on + strand, within BWI76_RS20700at 4330.514 kb on + strand, within BWI76_RS20700at 4330.520 kb on - strand, within BWI76_RS20700

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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4,327,979 + BWI76_RS20690 0.10 -0.2
4,328,069 + BWI76_RS20690 0.18 -2.1
4,328,214 - BWI76_RS20690 0.32 -0.1
4,328,633 + BWI76_RS20690 0.70 -1.0
4,328,766 + BWI76_RS20690 0.82 -0.2
4,328,766 + BWI76_RS20690 0.82 +1.6
4,328,785 + BWI76_RS20690 0.84 -1.4
4,328,885 - -0.1
4,328,914 - -0.1
4,329,541 - BWI76_RS20695 0.67 -0.3
4,329,542 + BWI76_RS20695 0.67 -1.4
4,329,550 - BWI76_RS20695 0.68 -2.1
4,329,748 + -0.0
4,329,874 - -0.3
4,330,165 + BWI76_RS20700 0.41 -1.2
4,330,224 - BWI76_RS20700 0.48 -0.4
4,330,325 - BWI76_RS20700 0.60 -0.2
4,330,512 + BWI76_RS20700 0.82 -0.9
4,330,514 + BWI76_RS20700 0.82 -0.5
4,330,520 - BWI76_RS20700 0.83 -0.3

Or see this region's nucleotide sequence