Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07165

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07160 and BWI76_RS07165 are separated by 9 nucleotidesBWI76_RS07165 and BWI76_RS07170 are separated by 138 nucleotides BWI76_RS07160: BWI76_RS07160 - MBL fold hydrolase, at 1,504,661 to 1,505,488 _RS07160 BWI76_RS07165: BWI76_RS07165 - hypothetical protein, at 1,505,498 to 1,506,040 _RS07165 BWI76_RS07170: BWI76_RS07170 - LysR family transcriptional regulator, at 1,506,179 to 1,507,054 _RS07170 Position (kb) 1505 1506 1507Strain fitness (log2 ratio) -1 0 1at 1504.587 kb on + strandat 1504.587 kb on + strandat 1504.633 kb on + strandat 1504.660 kb on - strandat 1504.675 kb on + strandat 1504.700 kb on + strandat 1504.712 kb on + strandat 1504.720 kb on - strandat 1504.799 kb on + strand, within BWI76_RS07160at 1504.802 kb on - strand, within BWI76_RS07160at 1504.802 kb on - strand, within BWI76_RS07160at 1504.941 kb on - strand, within BWI76_RS07160at 1505.289 kb on + strand, within BWI76_RS07160at 1505.831 kb on - strand, within BWI76_RS07165at 1505.861 kb on + strand, within BWI76_RS07165at 1506.224 kb on - strandat 1506.570 kb on + strand, within BWI76_RS07170at 1506.685 kb on + strand, within BWI76_RS07170at 1506.786 kb on - strandat 1506.791 kb on - strand, within BWI76_RS07170at 1506.831 kb on - strand, within BWI76_RS07170at 1506.845 kb on - strand, within BWI76_RS07170at 1506.866 kb on - strand, within BWI76_RS07170at 1506.945 kb on + strand, within BWI76_RS07170at 1507.002 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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1,504,587 + -0.1
1,504,587 + +1.0
1,504,633 + +0.1
1,504,660 - +0.8
1,504,675 + +0.0
1,504,700 + -0.1
1,504,712 + -1.4
1,504,720 - +0.0
1,504,799 + BWI76_RS07160 0.17 +1.4
1,504,802 - BWI76_RS07160 0.17 -0.8
1,504,802 - BWI76_RS07160 0.17 +0.2
1,504,941 - BWI76_RS07160 0.34 +1.1
1,505,289 + BWI76_RS07160 0.76 -0.8
1,505,831 - BWI76_RS07165 0.61 -1.3
1,505,861 + BWI76_RS07165 0.67 -0.6
1,506,224 - -0.1
1,506,570 + BWI76_RS07170 0.45 -0.5
1,506,685 + BWI76_RS07170 0.58 -0.2
1,506,786 - +0.2
1,506,791 - BWI76_RS07170 0.70 +0.6
1,506,831 - BWI76_RS07170 0.74 +0.0
1,506,845 - BWI76_RS07170 0.76 -0.3
1,506,866 - BWI76_RS07170 0.78 +0.1
1,506,945 + BWI76_RS07170 0.87 +0.1
1,507,002 - +0.3

Or see this region's nucleotide sequence