Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06250

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06245 and BWI76_RS06250 are separated by 152 nucleotidesBWI76_RS06250 and BWI76_RS06255 overlap by 4 nucleotides BWI76_RS06245: BWI76_RS06245 - proline-specific permease ProY, at 1,311,605 to 1,312,975 _RS06245 BWI76_RS06250: BWI76_RS06250 - alpha-glycosidase, at 1,313,128 to 1,314,945 _RS06250 BWI76_RS06255: BWI76_RS06255 - LysR family transcriptional regulator, at 1,314,942 to 1,315,844 _RS06255 Position (kb) 1313 1314 1315Strain fitness (log2 ratio) -2 -1 0 1at 1312.316 kb on - strand, within BWI76_RS06245at 1312.316 kb on - strand, within BWI76_RS06245at 1312.472 kb on + strand, within BWI76_RS06245at 1312.971 kb on - strandat 1313.071 kb on + strandat 1313.089 kb on + strandat 1313.123 kb on - strandat 1313.145 kb on + strandat 1313.556 kb on + strandat 1313.584 kb on + strand, within BWI76_RS06250at 1313.584 kb on + strand, within BWI76_RS06250at 1314.354 kb on + strand, within BWI76_RS06250at 1314.639 kb on - strand, within BWI76_RS06250at 1314.924 kb on - strandat 1314.946 kb on + strandat 1314.954 kb on - strandat 1315.004 kb on - strandat 1315.134 kb on + strand, within BWI76_RS06255at 1315.461 kb on - strand, within BWI76_RS06255at 1315.462 kb on - strand, within BWI76_RS06255at 1315.477 kb on - strand, within BWI76_RS06255at 1315.569 kb on + strand, within BWI76_RS06255at 1315.708 kb on - strand, within BWI76_RS06255at 1315.710 kb on - strand, within BWI76_RS06255at 1315.735 kb on + strand, within BWI76_RS06255at 1315.748 kb on - strand, within BWI76_RS06255at 1315.753 kb on - strand, within BWI76_RS06255at 1315.824 kb on + strandat 1315.825 kb on + strandat 1315.825 kb on + strandat 1315.826 kb on + strandat 1315.826 kb on + strandat 1315.826 kb on + strandat 1315.826 kb on + strandat 1315.826 kb on + strandat 1315.826 kb on + strandat 1315.831 kb on + strandat 1315.833 kb on + strandat 1315.833 kb on - strandat 1315.833 kb on - strandat 1315.834 kb on - strandat 1315.834 kb on - strandat 1315.834 kb on - strandat 1315.834 kb on - strandat 1315.834 kb on - strandat 1315.834 kb on - strandat 1315.841 kb on - strandat 1315.841 kb on - strandat 1315.841 kb on - strandat 1315.841 kb on - strandat 1315.841 kb on - strandat 1315.847 kb on + strandat 1315.870 kb on + strandat 1315.871 kb on - strandat 1315.878 kb on - strandat 1315.894 kb on + strandat 1315.894 kb on + strandat 1315.894 kb on + strandat 1315.894 kb on + strandat 1315.894 kb on + strandat 1315.894 kb on + strandat 1315.894 kb on + strandat 1315.894 kb on + strandat 1315.902 kb on - strandat 1315.902 kb on - strandat 1315.902 kb on - strandat 1315.902 kb on - strandat 1315.902 kb on - strandat 1315.902 kb on - strandat 1315.902 kb on - strandat 1315.902 kb on - strandat 1315.902 kb on - strandat 1315.902 kb on - strandat 1315.902 kb on - strandat 1315.902 kb on - strandat 1315.902 kb on - strandat 1315.902 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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1,312,316 - BWI76_RS06245 0.52 +0.2
1,312,316 - BWI76_RS06245 0.52 -0.2
1,312,472 + BWI76_RS06245 0.63 -0.1
1,312,971 - +0.4
1,313,071 + +0.1
1,313,089 + -1.9
1,313,123 - -1.7
1,313,145 + +0.8
1,313,556 + -0.1
1,313,584 + BWI76_RS06250 0.25 -0.2
1,313,584 + BWI76_RS06250 0.25 -2.0
1,314,354 + BWI76_RS06250 0.67 -0.7
1,314,639 - BWI76_RS06250 0.83 -0.9
1,314,924 - +1.0
1,314,946 + -0.4
1,314,954 - +0.1
1,315,004 - -0.4
1,315,134 + BWI76_RS06255 0.21 +0.2
1,315,461 - BWI76_RS06255 0.57 +0.1
1,315,462 - BWI76_RS06255 0.58 -0.1
1,315,477 - BWI76_RS06255 0.59 +0.4
1,315,569 + BWI76_RS06255 0.69 +0.3
1,315,708 - BWI76_RS06255 0.85 -1.0
1,315,710 - BWI76_RS06255 0.85 +1.5
1,315,735 + BWI76_RS06255 0.88 -0.0
1,315,748 - BWI76_RS06255 0.89 +0.1
1,315,753 - BWI76_RS06255 0.90 -0.2
1,315,824 + -0.6
1,315,825 + +0.5
1,315,825 + -1.0
1,315,826 + -0.5
1,315,826 + +0.1
1,315,826 + +0.3
1,315,826 + +1.5
1,315,826 + +0.3
1,315,826 + -1.3
1,315,831 + -0.1
1,315,833 + -1.3
1,315,833 - -0.4
1,315,833 - -0.4
1,315,834 - -0.3
1,315,834 - -0.8
1,315,834 - +0.7
1,315,834 - +0.4
1,315,834 - +0.9
1,315,834 - +0.1
1,315,841 - +0.8
1,315,841 - -0.2
1,315,841 - -0.2
1,315,841 - -0.5
1,315,841 - -0.6
1,315,847 + -0.0
1,315,870 + +0.2
1,315,871 - +0.5
1,315,878 - -0.7
1,315,894 + -0.2
1,315,894 + -0.2
1,315,894 + -1.2
1,315,894 + +0.6
1,315,894 + +1.5
1,315,894 + +0.5
1,315,894 + -1.3
1,315,894 + +0.3
1,315,902 - +0.5
1,315,902 - +0.0
1,315,902 - -0.5
1,315,902 - -0.2
1,315,902 - -0.0
1,315,902 - -1.0
1,315,902 - -0.4
1,315,902 - -0.2
1,315,902 - -0.9
1,315,902 - -0.5
1,315,902 - -0.4
1,315,902 - +1.1
1,315,902 - -0.4
1,315,902 - +1.1

Or see this region's nucleotide sequence