Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02040 and BWI76_RS02045 are separated by 60 nucleotides BWI76_RS02045 and BWI76_RS02050 are separated by 103 nucleotides BWI76_RS02050 and BWI76_RS02055 overlap by 8 nucleotides
BWI76_RS02040: BWI76_RS02040 - aryl-alcohol dehydrogenase, at 420,210 to 421,337
_RS02040
BWI76_RS02045: BWI76_RS02045 - LysR family transcriptional regulator, at 421,398 to 422,294
_RS02045
BWI76_RS02050: BWI76_RS02050 - CidA/LrgA family protein, at 422,398 to 422,808
_RS02050
BWI76_RS02055: BWI76_RS02055 - murein hydrolase effector protein LrgB, at 422,801 to 423,490
_RS02055
Position (kb) 421
422
423 Strain fitness (log2 ratio) -1
0
1
2 at 420.593 kb on - strand, within BWI76_RS02040 at 420.600 kb on - strand, within BWI76_RS02040 at 420.600 kb on - strand, within BWI76_RS02040 at 420.688 kb on - strand, within BWI76_RS02040 at 420.722 kb on + strand, within BWI76_RS02040 at 420.773 kb on - strand, within BWI76_RS02040 at 420.857 kb on + strand, within BWI76_RS02040 at 420.899 kb on - strand, within BWI76_RS02040 at 420.915 kb on + strand, within BWI76_RS02040 at 421.033 kb on - strand, within BWI76_RS02040 at 421.033 kb on - strand, within BWI76_RS02040 at 421.118 kb on + strand, within BWI76_RS02040 at 421.118 kb on + strand, within BWI76_RS02040 at 421.149 kb on + strand, within BWI76_RS02040 at 421.157 kb on - strand, within BWI76_RS02040 at 421.157 kb on - strand, within BWI76_RS02040 at 421.177 kb on - strand, within BWI76_RS02040 at 421.212 kb on - strand, within BWI76_RS02040 at 421.233 kb on - strand at 421.252 kb on - strand at 421.270 kb on + strand at 421.284 kb on + strand at 421.284 kb on + strand at 421.343 kb on + strand at 421.359 kb on - strand at 421.387 kb on - strand at 421.395 kb on + strand at 421.395 kb on + strand at 421.403 kb on - strand at 421.438 kb on + strand at 421.477 kb on - strand at 421.478 kb on - strand at 421.526 kb on - strand, within BWI76_RS02045 at 421.540 kb on - strand, within BWI76_RS02045 at 421.626 kb on - strand, within BWI76_RS02045 at 421.950 kb on + strand, within BWI76_RS02045 at 422.000 kb on + strand, within BWI76_RS02045 at 422.148 kb on + strand, within BWI76_RS02045 at 422.161 kb on - strand, within BWI76_RS02045 at 422.308 kb on + strand at 422.316 kb on - strand at 422.316 kb on - strand at 422.355 kb on + strand at 422.355 kb on + strand at 422.355 kb on + strand at 422.355 kb on + strand at 422.355 kb on + strand at 422.355 kb on + strand at 422.355 kb on + strand at 422.356 kb on + strand at 422.356 kb on + strand at 422.363 kb on - strand at 422.363 kb on - strand at 422.363 kb on - strand at 422.363 kb on - strand at 422.363 kb on - strand at 422.363 kb on - strand at 422.363 kb on - strand at 422.363 kb on - strand at 422.368 kb on - strand at 422.415 kb on - strand at 422.418 kb on + strand at 422.429 kb on + strand at 422.429 kb on + strand at 422.437 kb on - strand at 422.461 kb on + strand, within BWI76_RS02050 at 422.496 kb on + strand, within BWI76_RS02050 at 422.782 kb on + strand at 422.792 kb on + strand at 422.792 kb on + strand at 422.792 kb on + strand at 422.816 kb on - strand at 422.978 kb on - strand, within BWI76_RS02055 at 423.081 kb on + strand, within BWI76_RS02055 at 423.182 kb on + strand, within BWI76_RS02055 at 423.271 kb on - strand, within BWI76_RS02055
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 420,593 - BWI76_RS02040 0.34 +0.1 420,600 - BWI76_RS02040 0.35 -0.4 420,600 - BWI76_RS02040 0.35 -0.5 420,688 - BWI76_RS02040 0.42 +2.2 420,722 + BWI76_RS02040 0.45 -1.6 420,773 - BWI76_RS02040 0.50 -1.1 420,857 + BWI76_RS02040 0.57 +1.1 420,899 - BWI76_RS02040 0.61 -0.4 420,915 + BWI76_RS02040 0.62 -0.0 421,033 - BWI76_RS02040 0.73 +0.0 421,033 - BWI76_RS02040 0.73 -0.9 421,118 + BWI76_RS02040 0.80 -0.1 421,118 + BWI76_RS02040 0.80 +0.2 421,149 + BWI76_RS02040 0.83 +0.2 421,157 - BWI76_RS02040 0.84 +0.2 421,157 - BWI76_RS02040 0.84 -0.5 421,177 - BWI76_RS02040 0.86 +0.6 421,212 - BWI76_RS02040 0.89 -0.6 421,233 - +0.0 421,252 - +0.1 421,270 + +0.1 421,284 + +0.6 421,284 + -0.0 421,343 + -0.2 421,359 - +0.4 421,387 - -0.3 421,395 + +0.5 421,395 + +0.5 421,403 - -0.4 421,438 + -0.5 421,477 - -0.6 421,478 - -1.4 421,526 - BWI76_RS02045 0.14 +0.2 421,540 - BWI76_RS02045 0.16 +0.0 421,626 - BWI76_RS02045 0.25 +0.4 421,950 + BWI76_RS02045 0.62 +2.2 422,000 + BWI76_RS02045 0.67 +0.7 422,148 + BWI76_RS02045 0.84 +1.1 422,161 - BWI76_RS02045 0.85 -0.1 422,308 + -0.6 422,316 - -0.5 422,316 - +1.0 422,355 + +0.2 422,355 + -0.2 422,355 + +0.1 422,355 + +0.2 422,355 + +0.2 422,355 + -0.2 422,355 + +1.2 422,356 + +0.7 422,356 + -0.0 422,363 - -1.6 422,363 - -0.3 422,363 - -0.1 422,363 - -0.4 422,363 - -0.2 422,363 - -0.3 422,363 - -0.2 422,363 - -1.3 422,368 - +0.2 422,415 - -1.3 422,418 + +0.8 422,429 + -0.8 422,429 + +0.5 422,437 - +0.6 422,461 + BWI76_RS02050 0.15 -0.9 422,496 + BWI76_RS02050 0.24 +0.4 422,782 + -0.9 422,792 + +1.8 422,792 + -0.8 422,792 + -0.2 422,816 - -0.3 422,978 - BWI76_RS02055 0.26 -0.4 423,081 + BWI76_RS02055 0.41 +0.8 423,182 + BWI76_RS02055 0.55 +1.7 423,271 - BWI76_RS02055 0.68 -0.8
Or see this region's nucleotide sequence