Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01275

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS01265 and BWI76_RS01270 are separated by 88 nucleotidesBWI76_RS01270 and BWI76_RS01275 overlap by 113 nucleotidesBWI76_RS01275 and BWI76_RS01280 are separated by 232 nucleotides BWI76_RS01265: BWI76_RS01265 - sugar/pyridoxal phosphate phosphatase YigL, at 259,119 to 259,919 _RS01265 BWI76_RS01270: BWI76_RS01270 - hypothetical protein, at 260,008 to 260,907 _RS01270 BWI76_RS01275: BWI76_RS01275 - LysR family transcriptional regulator, at 260,795 to 261,748 _RS01275 BWI76_RS01280: BWI76_RS01280 - 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase, at 261,981 to 264,242 _RS01280 Position (kb) 260 261 262Strain fitness (log2 ratio) -2 -1 0 1at 259.806 kb on + strand, within BWI76_RS01265at 259.846 kb on - strandat 260.025 kb on - strandat 260.056 kb on - strandat 260.125 kb on + strand, within BWI76_RS01270at 260.163 kb on + strand, within BWI76_RS01270at 260.184 kb on + strand, within BWI76_RS01270at 260.206 kb on - strand, within BWI76_RS01270at 260.450 kb on + strand, within BWI76_RS01270at 260.451 kb on + strand, within BWI76_RS01270at 260.459 kb on - strand, within BWI76_RS01270at 260.522 kb on - strand, within BWI76_RS01270at 260.522 kb on - strand, within BWI76_RS01270at 260.578 kb on - strand, within BWI76_RS01270at 260.996 kb on + strand, within BWI76_RS01275at 261.005 kb on - strand, within BWI76_RS01275at 261.109 kb on - strand, within BWI76_RS01275at 261.114 kb on - strand, within BWI76_RS01275at 261.435 kb on - strand, within BWI76_RS01275at 261.625 kb on + strand, within BWI76_RS01275at 261.633 kb on - strand, within BWI76_RS01275at 261.663 kb on + strandat 261.699 kb on + strandat 261.904 kb on - strandat 262.023 kb on - strandat 262.089 kb on - strandat 262.183 kb on + strandat 262.201 kb on + strandat 262.226 kb on - strand, within BWI76_RS01280at 262.504 kb on - strand, within BWI76_RS01280at 262.504 kb on - strand, within BWI76_RS01280at 262.504 kb on - strand, within BWI76_RS01280at 262.504 kb on - strand, within BWI76_RS01280at 262.504 kb on - strand, within BWI76_RS01280at 262.504 kb on - strand, within BWI76_RS01280at 262.517 kb on - strand, within BWI76_RS01280at 262.692 kb on - strand, within BWI76_RS01280at 262.692 kb on - strand, within BWI76_RS01280

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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259,806 + BWI76_RS01265 0.86 -0.3
259,846 - -0.3
260,025 - +0.1
260,056 - +0.6
260,125 + BWI76_RS01270 0.13 -0.3
260,163 + BWI76_RS01270 0.17 -0.0
260,184 + BWI76_RS01270 0.20 -0.0
260,206 - BWI76_RS01270 0.22 +0.3
260,450 + BWI76_RS01270 0.49 -0.3
260,451 + BWI76_RS01270 0.49 +1.2
260,459 - BWI76_RS01270 0.50 -0.8
260,522 - BWI76_RS01270 0.57 +0.1
260,522 - BWI76_RS01270 0.57 +0.0
260,578 - BWI76_RS01270 0.63 -2.0
260,996 + BWI76_RS01275 0.21 -1.0
261,005 - BWI76_RS01275 0.22 -0.8
261,109 - BWI76_RS01275 0.33 -0.5
261,114 - BWI76_RS01275 0.33 -1.4
261,435 - BWI76_RS01275 0.67 -1.7
261,625 + BWI76_RS01275 0.87 -1.6
261,633 - BWI76_RS01275 0.88 -1.5
261,663 + -0.6
261,699 + -1.2
261,904 - +0.2
262,023 - -0.3
262,089 - +0.1
262,183 + +0.5
262,201 + -0.4
262,226 - BWI76_RS01280 0.11 +0.2
262,504 - BWI76_RS01280 0.23 -0.7
262,504 - BWI76_RS01280 0.23 -0.8
262,504 - BWI76_RS01280 0.23 -1.1
262,504 - BWI76_RS01280 0.23 +0.9
262,504 - BWI76_RS01280 0.23 +0.3
262,504 - BWI76_RS01280 0.23 -0.8
262,517 - BWI76_RS01280 0.24 -0.8
262,692 - BWI76_RS01280 0.31 -0.1
262,692 - BWI76_RS01280 0.31 +0.2

Or see this region's nucleotide sequence