Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2636

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,144,276	-		Shewana3_2635	0.84	+0.9
3,144,310	-				+0.9
3,144,329	+				-0.1
3,144,360	+				+1.9
3,144,583	-				+0.9
3,144,661	+				-0.4
3,144,678	-				+0.9
3,144,911	+				+0.9
3,144,916	+				+1.9
3,144,924	-				+0.9
3,144,924	-				+0.9
3,144,928	+				+0.9
3,144,935	+				+2.5
3,144,958	+				-0.1
3,144,959	-				-1.1
3,144,966	-				-0.1
3,145,006	+				+0.9
3,145,013	-				+0.9
3,145,014	-				-0.1
3,145,025	-				-0.7
3,145,042	+				+0.9
3,145,048	+				+0.9
3,145,050	-				-0.9
3,145,050	-				-0.1
3,145,070	-				-0.1
3,145,160	-				-0.1
3,145,162	+				-0.1
3,145,162	+				-0.1
3,145,163	-				+0.4
3,145,170	-				+0.9
3,145,170	-				-0.1
3,145,170	-				+0.9
3,145,229	-				-0.6
3,145,229	-				+0.5
3,145,231	+				-0.1
3,145,231	+				+0.9
3,145,234	-				-2.4
3,145,234	-				-1.1
3,145,239	-				-0.9
3,145,239	-				+0.9
3,145,239	-				-0.9
3,145,239	-				+0.3
3,145,252	+				+0.3
3,145,260	-				-1.1
3,145,260	-				-1.1
3,145,291	-				+1.9
3,145,321	+		Shewana3_2636	0.10	+0.9
3,145,332	-		Shewana3_2636	0.11	-0.7
3,145,348	+		Shewana3_2636	0.12	+0.9
3,145,353	+		Shewana3_2636	0.12	-1.5
3,145,353	+		Shewana3_2636	0.12	+0.9
3,145,356	-		Shewana3_2636	0.13	-0.1
3,145,361	-		Shewana3_2636	0.13	+0.1
3,145,361	-		Shewana3_2636	0.13	-1.1
3,145,363	-		Shewana3_2636	0.13	+0.4
3,145,397	+		Shewana3_2636	0.15	-0.1
3,145,412	+		Shewana3_2636	0.16	+0.9
3,145,412	+		Shewana3_2636	0.16	+0.9
3,145,420	-		Shewana3_2636	0.17	-2.2
3,145,420	-		Shewana3_2636	0.17	+1.5
3,145,420	-		Shewana3_2636	0.17	-1.1
3,145,420	-		Shewana3_2636	0.17	+0.9
3,145,420	-				+0.9
3,145,420	-		Shewana3_2636	0.17	+0.9
3,145,426	+		Shewana3_2636	0.17	-0.1
3,145,426	-		Shewana3_2636	0.17	+0.9
3,145,449	+		Shewana3_2636	0.19	+0.9
3,145,456	+		Shewana3_2636	0.19	+0.9
3,145,456	+		Shewana3_2636	0.19	+0.9
3,145,464	-		Shewana3_2636	0.20	+0.9
3,145,464	-		Shewana3_2636	0.20	+0.9
3,145,513	-		Shewana3_2636	0.23	+0.9
3,145,516	-		Shewana3_2636	0.23	+0.9
3,145,519	+		Shewana3_2636	0.24	-0.1
3,145,533	+		Shewana3_2636	0.24	+0.9
3,145,541	-		Shewana3_2636	0.25	-1.9
3,145,541	-		Shewana3_2636	0.25	-0.7
3,145,682	+		Shewana3_2636	0.34	+0.5
3,145,689	-		Shewana3_2636	0.35	+1.9
3,145,690	+		Shewana3_2636	0.35	+0.9
3,145,691	+		Shewana3_2636	0.35	+0.9
3,145,699	-		Shewana3_2636	0.36	+0.9
3,145,703	-		Shewana3_2636	0.36	+0.9
3,145,705	+		Shewana3_2636	0.36	+0.9
3,145,711	-		Shewana3_2636	0.36	+0.9
3,145,713	-		Shewana3_2636	0.36	-1.1
3,145,717	+		Shewana3_2636	0.37	+0.9
3,145,723	+		Shewana3_2636	0.37	+0.9
3,145,723	+		Shewana3_2636	0.37	+0.9
3,145,723	+		Shewana3_2636	0.37	+0.9
3,145,725	-		Shewana3_2636	0.37	+2.0
3,145,725	-		Shewana3_2636	0.37	-0.4
3,145,729	+		Shewana3_2636	0.38	+0.9
3,145,729	+		Shewana3_2636	0.38	+0.9
3,145,729	+		Shewana3_2636	0.38	+0.9
3,145,731	-		Shewana3_2636	0.38	-0.8
3,145,731	-		Shewana3_2636	0.38	-0.1
3,145,731	-		Shewana3_2636	0.38	+0.9
3,145,731	-		Shewana3_2636	0.38	+2.8
3,145,731	-		Shewana3_2636	0.38	+1.9
3,145,731	-		Shewana3_2636	0.38	+0.3
3,145,731	-		Shewana3_2636	0.38	+0.4
3,145,731	-		Shewana3_2636	0.38	-1.1
3,145,731	-		Shewana3_2636	0.38	+0.9
3,145,731	-		Shewana3_2636	0.38	+0.9
3,145,731	-		Shewana3_2636	0.38	+0.9
3,145,737	-		Shewana3_2636	0.38	-0.3
3,145,737	-		Shewana3_2636	0.38	+0.3
3,145,737	-		Shewana3_2636	0.38	-0.4
3,145,737	-		Shewana3_2636	0.38	-0.1
3,145,771	+		Shewana3_2636	0.40	-0.1
3,145,786	+		Shewana3_2636	0.41	+0.9
3,145,803	+		Shewana3_2636	0.42	+0.9
3,145,852	-		Shewana3_2636	0.46	-0.7
3,145,866	-		Shewana3_2636	0.47	-0.1
3,145,866	-		Shewana3_2636	0.47	+0.9
3,145,866	-		Shewana3_2636	0.47	+0.9
3,145,885	-		Shewana3_2636	0.48	+1.9
3,145,892	+		Shewana3_2636	0.48	+0.9
3,145,907	-		Shewana3_2636	0.49	-0.1
3,145,919	-		Shewana3_2636	0.50	-0.4
3,145,928	+		Shewana3_2636	0.51	+0.9
3,145,933	+		Shewana3_2636	0.51	+0.9
3,145,933	+		Shewana3_2636	0.51	+1.5
3,145,933	+		Shewana3_2636	0.51	+0.9
3,145,941	-		Shewana3_2636	0.52	-0.1
3,145,941	-		Shewana3_2636	0.52	+1.3
3,145,941	-		Shewana3_2636	0.52	+0.3
3,145,943	-		Shewana3_2636	0.52	-0.1
3,145,955	-		Shewana3_2636	0.53	-1.1
3,145,962	-		Shewana3_2636	0.53	-0.8
3,145,963	+		Shewana3_2636	0.53	+0.9
3,145,968	-		Shewana3_2636	0.54	-0.7
3,145,974	-		Shewana3_2636	0.54	-1.7
3,145,981	-		Shewana3_2636	0.54	+0.9
3,145,987	-		Shewana3_2636	0.55	+0.9
3,145,987	-		Shewana3_2636	0.55	-0.3
3,145,987	-		Shewana3_2636	0.55	+0.9
3,145,987	-		Shewana3_2636	0.55	+0.9
3,145,987	-		Shewana3_2636	0.55	-0.6
3,145,987	-		Shewana3_2636	0.55	+0.9
3,145,987	-		Shewana3_2636	0.55	-0.1
3,145,989	-		Shewana3_2636	0.55	+2.4
3,146,001	+		Shewana3_2636	0.56	+0.9
3,146,007	-		Shewana3_2636	0.56	+0.9
3,146,015	+		Shewana3_2636	0.57	+0.9
3,146,015	+		Shewana3_2636	0.57	+0.9
3,146,035	+		Shewana3_2636	0.58	-0.1
3,146,041	-		Shewana3_2636	0.58	-1.1
3,146,055	-		Shewana3_2636	0.59	-2.1
3,146,072	+		Shewana3_2636	0.60	+0.9
3,146,080	-		Shewana3_2636	0.61	+1.7
3,146,080	-		Shewana3_2636	0.61	+2.5
3,146,080	-		Shewana3_2636	0.61	-1.1
3,146,080	-		Shewana3_2636	0.61	+0.9
3,146,103	-		Shewana3_2636	0.63	+1.3
3,146,103	-		Shewana3_2636	0.63	+0.1
3,146,110	+		Shewana3_2636	0.63	+0.9
3,146,113	-		Shewana3_2636	0.63	-0.1
3,146,113	-		Shewana3_2636	0.63	+0.8
3,146,113	-		Shewana3_2636	0.63	+0.9
3,146,115	+		Shewana3_2636	0.63	+0.9
3,146,116	+		Shewana3_2636	0.63	-0.7
3,146,123	-		Shewana3_2636	0.64	-1.1
3,146,123	-		Shewana3_2636	0.64	+0.3
3,146,183	+		Shewana3_2636	0.68	-0.1
3,146,198	+		Shewana3_2636	0.69	-0.1
3,146,203	-		Shewana3_2636	0.69	+1.9
3,146,205	+		Shewana3_2636	0.69	+1.9
3,146,205	+		Shewana3_2636	0.69	+0.9
3,146,205	+		Shewana3_2636	0.69	+0.9
3,146,205	-		Shewana3_2636	0.69	-0.7
3,146,206	-		Shewana3_2636	0.69	-0.1
3,146,206	-		Shewana3_2636	0.69	+0.9
3,146,207	+		Shewana3_2636	0.69	+0.9
3,146,213	-		Shewana3_2636	0.70	+0.9
3,146,213	-		Shewana3_2636	0.70	-0.7
3,146,213	-		Shewana3_2636	0.70	-0.1
3,146,213	-		Shewana3_2636	0.70	+1.9
3,146,213	-		Shewana3_2636	0.70	+0.3
3,146,213	-		Shewana3_2636	0.70	+0.5
3,146,213	-		Shewana3_2636	0.70	-0.2
3,146,214	-		Shewana3_2636	0.70	-1.7
3,146,214	-		Shewana3_2636	0.70	-0.1
3,146,214	-		Shewana3_2636	0.70	+0.8
3,146,214	-		Shewana3_2636	0.70	+0.4
3,146,215	-		Shewana3_2636	0.70	+3.3
3,146,215	-		Shewana3_2636	0.70	-0.1
3,146,215	-		Shewana3_2636	0.70	+0.1
3,146,215	-		Shewana3_2636	0.70	-0.2
3,146,215	-		Shewana3_2636	0.70	+0.9
3,146,225	-		Shewana3_2636	0.71	+0.9
3,146,226	-		Shewana3_2636	0.71	-0.1
3,146,226	-		Shewana3_2636	0.71	+0.1
3,146,246	-		Shewana3_2636	0.72	+0.9
3,146,248	-		Shewana3_2636	0.72	-0.7
3,146,277	+		Shewana3_2636	0.74	-0.1
3,146,277	+		Shewana3_2636	0.74	+2.3
3,146,285	-		Shewana3_2636	0.75	-1.7
3,146,291	-		Shewana3_2636	0.75	+0.9
3,146,292	-		Shewana3_2636	0.75	-2.4
3,146,292	-		Shewana3_2636	0.75	+0.9
3,146,292	-		Shewana3_2636	0.75	+0.9
3,146,295	-		Shewana3_2636	0.75	+0.9
3,146,305	-		Shewana3_2636	0.76	-0.2
3,146,306	-		Shewana3_2636	0.76	+1.2
3,146,306	-		Shewana3_2636	0.76	+1.1
3,146,306	-		Shewana3_2636	0.76	-1.1
3,146,307	-		Shewana3_2636	0.76	-0.7
3,146,307	-		Shewana3_2636	0.76	+0.9
3,146,307	-		Shewana3_2636	0.76	+0.9
3,146,398	-		Shewana3_2636	0.82	+1.9
3,146,398	-		Shewana3_2636	0.82	+0.3
3,146,403	-		Shewana3_2636	0.83	-0.1
3,146,463	-		Shewana3_2636	0.87	-1.7
3,146,463	-		Shewana3_2636	0.87	-0.1
3,146,464	-		Shewana3_2636	0.87	+0.3
3,146,465	-		Shewana3_2636	0.87	+0.9
3,146,477	-		Shewana3_2636	0.88	-0.8
3,146,501	+		Shewana3_2636	0.89	+0.9
3,146,503	-		Shewana3_2636	0.89	+0.2
3,146,509	-		Shewana3_2636	0.90	-1.1
3,146,509	-		Shewana3_2636	0.90	+0.6
3,146,509	-		Shewana3_2636	0.90	+0.9
3,146,509	-		Shewana3_2636	0.90	+0.9
3,146,509	-		Shewana3_2636	0.90	+0.9
3,146,509	-		Shewana3_2636	0.90	+0.9
3,146,514	-				-0.4
3,146,514	-				-1.7
3,146,524	-				+0.9
3,146,525	-				-4.7
3,146,533	-				+0.9
3,146,535	-				+1.7
3,146,535	-				+0.2
3,146,556	-				+2.9
3,146,584	+				+0.9
3,146,584	+				-0.1
3,146,584	+				+0.9
3,146,584	+				+0.9
3,146,584	+				+0.9
3,146,592	-				-2.2
3,146,592	-				+1.5
3,146,592	-				-1.5
3,146,592	-				-0.1
3,146,592	-				-1.5
3,146,592	-				+0.9
3,146,593	-				-0.4
3,146,622	+				+0.9
3,146,627	+				+0.9
3,146,631	-				-1.2
3,146,635	-				-1.1
3,146,644	-				+0.9
3,146,644	-				+1.3
3,146,671	+				-0.1
3,146,671	+				-1.9
3,146,679	-				-0.7
3,146,710	-				-0.1
3,146,713	+				+0.9
3,146,715	-				+0.3
3,146,731	-				-0.1
3,146,763	+				+0.9
3,146,778	+				+0.9
3,146,784	+				-1.1
3,146,786	-				-0.5
3,146,810	+				+0.9
3,146,825	+				+0.9
3,146,825	+				+0.9
3,146,825	+				-0.7
3,146,828	-				-0.8
3,146,828	-				+0.6
3,146,833	-				+0.2
3,146,833	-				-0.7
3,146,833	-				-0.3
3,146,833	-				-2.5
3,146,833	-				+0.2
3,146,847	+				+0.9
3,146,855	-				-0.1
3,146,855	-				+2.3
3,146,855	-				-1.4
3,146,858	+				-0.7
3,146,858	+				+0.9
3,146,860	+				-0.1
3,146,866	-				+1.6
3,146,866	-				-0.1
3,146,866	-				-1.1
3,146,866	-				-1.9
3,146,884	-				+0.1
3,146,884	-				+0.9
3,146,884	-				-0.3
3,146,884	-				-3.0
3,146,884	-				-0.6
3,146,884	-				+0.0
3,146,884	-				+1.9
3,146,922	+				-0.1
3,146,930	-				+0.3
3,146,930	-				-0.7
3,146,930	-				-0.1
3,146,930	-				+2.2
3,146,930	-				+1.3
3,146,930	-				+1.4
3,146,930	-				-0.4
3,146,930	-				+0.8
3,146,930	-				+0.6
3,146,930	-				+0.4
3,146,930	-				+0.5
3,146,930	-				+0.8
3,146,930	-				-0.8
3,146,930	-				-0.1
3,146,953	+				-0.1
3,146,961	-				-1.4
3,146,961	-				-2.5
3,146,973	-				+1.9
3,146,984	-				+0.9
3,146,984	-				+1.9
3,146,992	-				+2.1
3,146,992	-				+0.9
3,146,996	+				+0.9
3,147,003	-				-0.9
3,147,003	-				+1.7
3,147,003	-				+0.4
3,147,003	-				+1.1
3,147,003	-				-1.4
3,147,003	-				-0.1
3,147,003	-				-0.7
3,147,003	-				-0.7
3,147,003	-				-1.1
3,147,004	-				+1.5
3,147,004	-				-0.5
3,147,004	-				+0.1
3,147,004	-				+1.3
3,147,004	-				+0.9
3,147,004	-				+0.7
3,147,054	-				-1.0
3,147,054	-				+0.5
3,147,146	+				+0.9
3,147,154	-				-0.7
3,147,154	-				+0.5
3,147,154	-				-2.2
3,147,165	+				+0.9
3,147,173	-				+0.9
3,147,242	+				-0.1
3,147,250	-				-0.1
3,147,250	-				-0.1
3,147,250	-				+1.2
3,147,253	+				+0.9
3,147,270	+				+0.9
3,147,291	-				+0.7
3,147,307	+				+0.9
3,147,307	+				+0.9
3,147,307	+				+0.9
3,147,307	+				+0.9
3,147,309	+				+0.9
3,147,309	+				+0.9
3,147,309	+				+0.9
3,147,309	+				+0.9
3,147,309	+				+0.9
3,147,309	+				+0.9
3,147,309	+				+0.9
3,147,309	+				-2.1
3,147,309	+				+0.9
3,147,315	-				+1.1
3,147,315	-				-0.4
3,147,317	-				-1.4
3,147,317	-				-0.1
3,147,317	-				+1.6
3,147,317	-				-0.5
3,147,317	-				-2.5
3,147,317	-				-0.4
3,147,317	-				-1.1
3,147,317	-				+1.6
3,147,317	-				-0.1
3,147,317	-				-1.4
3,147,317	-				+0.4
3,147,317	-				-0.9
3,147,317	-				-1.3
3,147,317	-				+1.3
3,147,317	-				+1.5
3,147,317	-				-2.1
3,147,317	-				-0.8
3,147,317	-				-0.7
3,147,317	-				-0.5
3,147,317	-				+0.7
3,147,317	-				-1.1
3,147,317	-				+0.9
3,147,327	+				-0.4
3,147,329	-				-0.1
3,147,329	-				+0.9
3,147,330	-				+1.5
3,147,332	+				+0.9
3,147,332	+				+0.3
3,147,332	+				-0.7
3,147,332	+				-0.7
3,147,332	+				+0.9
3,147,333	+				+0.9
3,147,333	+				+0.9
3,147,340	-				-0.1
3,147,340	-				+2.5
3,147,340	-				-0.1
3,147,340	-				+0.2
3,147,340	-				+1.9
3,147,340	-				-0.4
3,147,340	-				+0.1
3,147,340	-				+1.1
3,147,340	-				+0.0
3,147,340	-				-2.8
3,147,340	-				-1.7
3,147,340	-				+0.9
3,147,340	-				-1.0
3,147,340	-				+0.1
3,147,340	-				-1.7
3,147,340	-				-0.1
3,147,340	-				+0.3
3,147,340	-				-0.5
3,147,340	-				-0.2
3,147,340	-				+0.9
3,147,340	-				-1.7
3,147,340	-				-0.1
3,147,340	-				-0.1
3,147,340	-				-0.1
3,147,340	-				+1.7
3,147,340	-				+1.0
3,147,340	-				-1.7
3,147,340	-				-1.9
3,147,340	-				-0.1
3,147,340	-				+0.9
3,147,341	-				-0.7
3,147,341	-				+1.9
3,147,341	-				-0.1
3,147,341	-				-0.7
3,147,341	-				-1.7
3,147,341	-				-0.3
3,147,341	-				-1.4
3,147,341	-				-0.1
3,147,341	-				+0.9
3,147,341	-				+0.4
3,147,341	-				-3.2
3,147,341	-				+1.9
3,147,341	-				-0.7
3,147,365	+				+0.9
3,147,366	+				+1.9
3,147,373	-				-0.4
3,147,374	-				-1.7
3,147,463	-		Shewana3_2637	0.16	+2.5
3,147,465	+		Shewana3_2637	0.16	+0.9
3,147,489	+		Shewana3_2637	0.20	-0.1
3,147,497	-		Shewana3_2637	0.22	-0.1
3,147,497	-		Shewana3_2637	0.22	-1.4
3,147,518	-		Shewana3_2637	0.26	+0.9
3,147,518	-		Shewana3_2637	0.26	+1.9
3,147,518	-		Shewana3_2637	0.26	-0.4
3,147,542	-		Shewana3_2637	0.30	-0.1
3,147,542	-		Shewana3_2637	0.30	-1.1
3,147,542	-		Shewana3_2637	0.30	+0.3