Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_389 and Pf1N1B4_390 are separated by 9 nucleotides Pf1N1B4_390 and Pf1N1B4_391 are separated by 106 nucleotides Pf1N1B4_391 and Pf1N1B4_392 are separated by 0 nucleotides
Pf1N1B4_389 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 457,625 to 457,981
_389
Pf1N1B4_390 - Extracellular solute-binding protein, family 3, at 457,991 to 458,827
_390
Pf1N1B4_391 - Electron transfer flavoprotein, alpha subunit, at 458,934 to 459,863
_391
Pf1N1B4_392 - Electron transfer flavoprotein, beta subunit, at 459,864 to 460,613
_392
Position (kb) 458
459
460 Strain fitness (log2 ratio) -1
0
1
2 at 457.975 kb on + strand at 457.975 kb on + strand at 457.976 kb on - strand at 457.976 kb on - strand at 457.982 kb on + strand at 457.983 kb on - strand at 457.992 kb on + strand at 458.113 kb on + strand, within Pf1N1B4_390 at 458.155 kb on + strand, within Pf1N1B4_390 at 458.257 kb on - strand, within Pf1N1B4_390 at 458.375 kb on + strand, within Pf1N1B4_390 at 458.375 kb on + strand, within Pf1N1B4_390 at 458.433 kb on + strand, within Pf1N1B4_390 at 458.441 kb on + strand, within Pf1N1B4_390 at 458.469 kb on + strand, within Pf1N1B4_390 at 458.499 kb on + strand, within Pf1N1B4_390 at 458.499 kb on + strand at 458.499 kb on + strand, within Pf1N1B4_390 at 458.499 kb on + strand, within Pf1N1B4_390 at 458.500 kb on - strand, within Pf1N1B4_390 at 458.500 kb on - strand, within Pf1N1B4_390 at 458.601 kb on + strand, within Pf1N1B4_390 at 458.673 kb on + strand, within Pf1N1B4_390 at 458.673 kb on + strand, within Pf1N1B4_390 at 458.673 kb on + strand, within Pf1N1B4_390 at 458.673 kb on + strand, within Pf1N1B4_390 at 458.673 kb on + strand, within Pf1N1B4_390 at 458.673 kb on + strand, within Pf1N1B4_390 at 458.673 kb on + strand, within Pf1N1B4_390 at 458.673 kb on + strand, within Pf1N1B4_390 at 458.673 kb on + strand, within Pf1N1B4_390 at 458.674 kb on - strand, within Pf1N1B4_390 at 458.674 kb on - strand, within Pf1N1B4_390 at 458.704 kb on - strand, within Pf1N1B4_390 at 458.795 kb on + strand at 458.840 kb on + strand at 458.840 kb on + strand at 458.841 kb on - strand at 458.841 kb on - strand at 458.850 kb on + strand at 458.872 kb on + strand at 458.872 kb on + strand at 458.915 kb on + strand at 458.915 kb on + strand at 458.915 kb on + strand at 458.916 kb on - strand at 458.916 kb on - strand at 458.916 kb on - strand at 458.916 kb on - strand at 458.916 kb on - strand at 458.916 kb on - strand at 458.916 kb on - strand at 458.917 kb on + strand at 458.917 kb on + strand at 458.917 kb on + strand at 458.917 kb on + strand at 458.917 kb on + strand at 458.917 kb on + strand at 458.917 kb on + strand at 458.917 kb on + strand at 458.917 kb on + strand at 458.917 kb on + strand at 458.917 kb on + strand at 458.917 kb on + strand at 458.918 kb on - strand at 458.918 kb on - strand at 458.918 kb on - strand at 458.918 kb on - strand at 458.935 kb on + strand at 460.828 kb on - strand at 460.828 kb on - strand at 460.828 kb on - strand at 460.848 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 457,975 + -0.1 457,975 + +0.1 457,976 - +1.5 457,976 - +0.0 457,982 + -1.7 457,983 - -0.7 457,992 + +1.1 458,113 + Pf1N1B4_390 0.15 +0.3 458,155 + Pf1N1B4_390 0.20 -0.6 458,257 - Pf1N1B4_390 0.32 +0.8 458,375 + Pf1N1B4_390 0.46 -0.8 458,375 + Pf1N1B4_390 0.46 -0.6 458,433 + Pf1N1B4_390 0.53 +1.2 458,441 + Pf1N1B4_390 0.54 +1.6 458,469 + Pf1N1B4_390 0.57 +0.4 458,499 + Pf1N1B4_390 0.61 +0.9 458,499 + -0.7 458,499 + Pf1N1B4_390 0.61 +0.2 458,499 + Pf1N1B4_390 0.61 +1.2 458,500 - Pf1N1B4_390 0.61 +0.5 458,500 - Pf1N1B4_390 0.61 -0.9 458,601 + Pf1N1B4_390 0.73 +0.2 458,673 + Pf1N1B4_390 0.81 -0.1 458,673 + Pf1N1B4_390 0.81 +0.7 458,673 + Pf1N1B4_390 0.81 -0.4 458,673 + Pf1N1B4_390 0.81 -0.1 458,673 + Pf1N1B4_390 0.81 +0.2 458,673 + Pf1N1B4_390 0.81 -0.9 458,673 + Pf1N1B4_390 0.81 +0.3 458,673 + Pf1N1B4_390 0.81 +0.7 458,673 + Pf1N1B4_390 0.81 +0.2 458,674 - Pf1N1B4_390 0.82 +0.9 458,674 - Pf1N1B4_390 0.82 -0.1 458,704 - Pf1N1B4_390 0.85 -0.1 458,795 + -1.1 458,840 + +0.3 458,840 + -0.1 458,841 - +0.9 458,841 - -0.1 458,850 + +0.3 458,872 + -0.1 458,872 + +1.2 458,915 + -0.7 458,915 + -0.7 458,915 + +2.5 458,916 - +1.3 458,916 - -0.1 458,916 - +0.6 458,916 - -0.1 458,916 - +0.9 458,916 - +0.6 458,916 - -0.4 458,917 + -0.7 458,917 + -1.7 458,917 + -1.1 458,917 + +0.9 458,917 + -0.1 458,917 + -0.6 458,917 + -0.5 458,917 + -0.1 458,917 + -0.7 458,917 + -1.1 458,917 + -0.3 458,917 + -0.1 458,918 - -0.6 458,918 - -0.4 458,918 - -0.1 458,918 - -1.1 458,935 + +0.4 460,828 - +0.1 460,828 - +0.0 460,828 - -0.1 460,848 - -0.4
Or see this region's nucleotide sequence