Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3179

Experiment: L-Citrulline (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (N)
3,559,620	-		Pf1N1B4_3177	0.70	+0.4
3,559,621	+		Pf1N1B4_3177	0.70	+2.6
3,559,621	+		Pf1N1B4_3177	0.70	-0.1
3,559,621	+		Pf1N1B4_3177	0.70	+0.4
3,559,621	+		Pf1N1B4_3177	0.70	-1.0
3,559,621	+		Pf1N1B4_3177	0.70	-0.4
3,559,621	+		Pf1N1B4_3177	0.70	+1.3
3,559,621	+		Pf1N1B4_3177	0.70	-0.4
3,559,621	+		Pf1N1B4_3177	0.70	+2.0
3,559,621	+		Pf1N1B4_3177	0.70	-1.0
3,559,622	-		Pf1N1B4_3177	0.70	-0.2
3,559,622	-		Pf1N1B4_3177	0.70	-0.7
3,559,622	-				+1.0
3,559,622	-		Pf1N1B4_3177	0.70	-1.3
3,559,622	-		Pf1N1B4_3177	0.70	-1.0
3,559,645	+		Pf1N1B4_3177	0.73	-0.5
3,559,645	+		Pf1N1B4_3177	0.73	+2.6
3,559,646	-		Pf1N1B4_3177	0.73	+1.0
3,559,646	-		Pf1N1B4_3177	0.73	+0.6
3,559,646	-		Pf1N1B4_3177	0.73	+0.0
3,559,646	-		Pf1N1B4_3177	0.73	+0.6
3,559,646	-		Pf1N1B4_3177	0.73	+1.2
3,559,651	+		Pf1N1B4_3177	0.74	+1.0
3,559,651	+		Pf1N1B4_3177	0.74	+2.0
3,559,651	+		Pf1N1B4_3177	0.74	-0.7
3,559,651	+		Pf1N1B4_3177	0.74	-0.6
3,559,651	+		Pf1N1B4_3177	0.74	-1.0
3,559,651	+		Pf1N1B4_3177	0.74	+0.0
3,559,652	-		Pf1N1B4_3177	0.74	+0.0
3,559,652	-		Pf1N1B4_3177	0.74	-0.6
3,559,652	-		Pf1N1B4_3177	0.74	+1.3
3,559,675	+		Pf1N1B4_3177	0.77	-1.0
3,559,675	+		Pf1N1B4_3177	0.77	-0.4
3,559,675	+		Pf1N1B4_3177	0.77	+0.4
3,559,675	+		Pf1N1B4_3177	0.77	+1.6
3,559,675	+		Pf1N1B4_3177	0.77	-1.3
3,559,676	-		Pf1N1B4_3177	0.77	+0.4
3,559,676	-		Pf1N1B4_3177	0.77	-0.4
3,559,676	-				+2.6
3,559,676	-		Pf1N1B4_3177	0.77	+1.0
3,559,783	+				-0.1
3,559,793	+				+0.6
3,559,794	-				+2.0
3,559,796	-				-2.3
3,559,796	-				+2.8
3,559,796	-				+1.0
3,559,813	+				-1.0
3,559,813	+				+0.5
3,559,945	-		Pf1N1B4_3178	0.16	-1.0
3,559,945	-		Pf1N1B4_3178	0.16	+2.0
3,559,956	+		Pf1N1B4_3178	0.17	-0.3
3,559,956	+		Pf1N1B4_3178	0.17	+0.5
3,559,956	+		Pf1N1B4_3178	0.17	+0.0
3,559,957	-		Pf1N1B4_3178	0.17	-1.0
3,559,957	-		Pf1N1B4_3178	0.17	-0.1
3,559,957	-				+0.0
3,560,131	-		Pf1N1B4_3178	0.41	+0.0
3,560,199	+		Pf1N1B4_3178	0.50	-1.3
3,560,199	+		Pf1N1B4_3178	0.50	+2.2
3,560,199	+				+0.0
3,560,199	+				+0.0
3,560,199	+		Pf1N1B4_3178	0.50	+0.0
3,560,200	-		Pf1N1B4_3178	0.50	+1.0
3,560,200	-		Pf1N1B4_3178	0.50	+0.0
3,560,208	+		Pf1N1B4_3178	0.52	+1.0
3,560,208	+		Pf1N1B4_3178	0.52	+1.6
3,560,208	+		Pf1N1B4_3178	0.52	+0.6
3,560,208	+		Pf1N1B4_3178	0.52	-0.4
3,560,209	-		Pf1N1B4_3178	0.52	-0.7
3,560,209	-		Pf1N1B4_3178	0.52	+0.3
3,560,259	+		Pf1N1B4_3178	0.59	+1.6
3,560,259	+		Pf1N1B4_3178	0.59	-0.4
3,560,259	+		Pf1N1B4_3178	0.59	+0.7
3,560,259	+		Pf1N1B4_3178	0.59	+0.0
3,560,260	-				+1.0
3,560,260	-		Pf1N1B4_3178	0.59	+0.0
3,560,260	-		Pf1N1B4_3178	0.59	-0.5
3,560,260	-		Pf1N1B4_3178	0.59	-2.3
3,560,260	-		Pf1N1B4_3178	0.59	-2.3
3,560,260	-		Pf1N1B4_3178	0.59	+0.3
3,560,311	-		Pf1N1B4_3178	0.66	+2.3
3,560,364	+		Pf1N1B4_3178	0.73	+0.9
3,560,364	+		Pf1N1B4_3178	0.73	-0.7
3,560,365	-		Pf1N1B4_3178	0.73	+0.6
3,560,365	-		Pf1N1B4_3178	0.73	+1.3
3,560,543	+				-0.8
3,560,543	+				+1.2
3,560,544	-				+0.7
3,560,546	+				+0.4
3,560,560	+				+0.6
3,560,561	-				+1.2
3,560,561	-				-2.2
3,560,561	-				-0.6
3,560,561	-				-0.7
3,560,561	-				-0.8
3,560,619	-				-1.0
3,560,619	-				+0.0
3,560,619	-				+2.0
3,560,619	-				-1.0
3,560,619	-				+0.7
3,560,673	-				-0.4
3,560,700	+				-0.6
3,560,700	+		Pf1N1B4_3179	0.11	+0.4
3,560,733	+		Pf1N1B4_3179	0.15	-0.4
3,560,734	-		Pf1N1B4_3179	0.15	-0.8
3,560,740	-		Pf1N1B4_3179	0.16	+0.0
3,560,740	-		Pf1N1B4_3179	0.16	+1.9
3,560,740	-		Pf1N1B4_3179	0.16	+0.8
3,560,745	+		Pf1N1B4_3179	0.16	+0.1
3,560,894	+		Pf1N1B4_3179	0.35	-0.6
3,560,895	-		Pf1N1B4_3179	0.36	+1.7
3,560,895	-		Pf1N1B4_3179	0.36	+0.0
3,560,895	-		Pf1N1B4_3179	0.36	-1.6
3,560,915	+		Pf1N1B4_3179	0.38	-0.6
3,560,929	+				+2.3
3,560,961	-		Pf1N1B4_3179	0.44	+1.3
3,560,961	-		Pf1N1B4_3179	0.44	-0.8
3,561,053	+		Pf1N1B4_3179	0.56	+1.0
3,561,053	+		Pf1N1B4_3179	0.56	+0.0
3,561,054	-		Pf1N1B4_3179	0.56	+0.0
3,561,054	-		Pf1N1B4_3179	0.56	-1.6
3,561,054	-		Pf1N1B4_3179	0.56	+0.0
3,561,253	+		Pf1N1B4_3179	0.81	+0.9
3,561,253	+		Pf1N1B4_3179	0.81	-1.0
3,561,326	+				+0.3
3,561,326	+				-1.3
3,561,327	-				+1.0
3,561,327	-				+1.0
3,561,327	-				+0.9
3,561,412	-				+0.0
3,561,421	+				+0.0
3,561,421	+				+1.0
3,561,422	-				+0.8
3,561,422	-				+0.7
3,561,444	+				+0.3
3,561,444	+				-0.5
3,561,444	+				+1.6
3,561,444	+				+0.2
3,561,444	+				+0.0
3,561,444	+				-0.6
3,561,444	+				+0.0
3,561,444	+				+0.9
3,561,445	-				+0.3
3,561,445	-				+0.8
3,561,445	-				+0.0
3,561,445	-				+0.3
3,561,445	-				-1.3
3,561,445	-				+1.4
3,561,445	-				-0.9
3,561,445	-				-0.4
3,561,445	-				+0.0
3,561,445	-				+0.0
3,561,445	-				+0.2
3,561,445	-				+0.1
3,561,445	-				+0.6
3,561,445	-				-0.1
3,561,445	-				+0.0
3,561,445	-				+0.7
3,561,445	-				+1.3
3,561,445	-				+0.2
3,561,445	-				+1.0
3,561,445	-				+2.3
3,561,445	-				+0.0
3,561,450	+				+1.0
3,561,451	-				-1.6
3,561,451	-				-0.3
3,561,462	+				-0.6
3,561,462	+				+1.0
3,561,463	-				-0.4
3,561,463	-				-0.4
3,561,463	-				+1.6
3,561,463	-				+1.1
3,561,463	-				+0.4
3,561,470	-				+0.0
3,561,470	-				+1.4
3,561,470	-				-0.6
3,561,470	-				+0.0
3,561,472	+				-0.4
3,561,473	-				-0.6
3,561,473	-				-0.1
3,561,473	-				+0.7
3,561,473	-				-0.7
3,561,479	-				+1.3
3,561,479	-				-0.4
3,561,513	+				+0.0
3,561,514	-				-1.0
3,561,514	-				+0.2
3,561,520	+				-1.6
3,561,521	-				-0.5
3,561,521	-				+1.2
3,561,523	+				+0.0
3,561,523	+				+0.0
3,561,523	+				-1.0
3,561,524	-				+1.2
3,561,524	-				-0.5
3,561,524	-				-1.3
3,561,524	-				+0.0
3,561,524	-				-0.7
3,561,524	-				-0.1
3,561,524	-				+0.0
3,561,524	-				+2.8
3,561,524	-				-1.3
3,561,524	-				+0.6
3,561,547	+				-0.2
3,561,548	-				+0.5
3,561,597	+				+1.0
3,561,597	+				-0.6
3,561,598	-				-0.4
3,561,598	-				+0.2
3,561,598	-				-0.8
3,561,599	+				-0.3
3,561,599	+				-0.3
3,561,599	+				+0.0
3,561,600	-				+1.0
3,561,600	-				+0.5
3,561,600	-				+0.0
3,561,600	-				-0.2
3,561,623	+				+1.0
3,561,623	+				+3.0
3,561,623	+				+0.7
3,561,624	-				+0.1
3,561,624	-				-1.6
3,561,624	-				-0.4
3,561,624	-				+1.2
3,561,681	+				-0.6
3,561,682	-				-1.0
3,561,878	+				+0.0
3,561,878	+				-0.5
3,561,878	+				+1.3
3,561,879	-				-1.6
3,561,879	-				-0.4
3,561,879	-				+1.2
3,561,879	-				+0.3
3,561,879	-				-1.0
3,561,879	-				+0.0
3,561,879	-				-1.0
3,561,879	-				+0.0
3,561,879	-				+1.0
3,561,879	-				+0.0
3,561,879	-				-1.0
3,561,879	-				-0.2
3,561,879	-				-1.4
3,561,879	-				+0.6
3,561,978	+		Pf1N1B4_3180	0.12	-0.4
3,561,978	+		Pf1N1B4_3180	0.12	+1.0
3,561,979	-		Pf1N1B4_3180	0.12	+1.0
3,561,979	-		Pf1N1B4_3180	0.12	+0.2
3,561,979	-		Pf1N1B4_3180	0.12	+1.6
3,561,979	-		Pf1N1B4_3180	0.12	-1.0
3,561,979	-		Pf1N1B4_3180	0.12	+1.6
3,561,979	-		Pf1N1B4_3180	0.12	-0.7
3,562,025	-		Pf1N1B4_3180	0.15	+1.0
3,562,025	-		Pf1N1B4_3180	0.15	+0.2
3,562,025	-		Pf1N1B4_3180	0.15	+0.8
3,562,025	-		Pf1N1B4_3180	0.15	+0.3
3,562,094	-		Pf1N1B4_3180	0.19	+1.0
3,562,094	-		Pf1N1B4_3180	0.19	+0.0
3,562,094	-		Pf1N1B4_3180	0.19	+0.7
3,562,102	+				+0.0
3,562,102	+		Pf1N1B4_3180	0.19	+0.0
3,562,102	+		Pf1N1B4_3180	0.19	-1.4
3,562,102	+		Pf1N1B4_3180	0.19	-0.9
3,562,103	-		Pf1N1B4_3180	0.19	+0.6
3,562,103	-				+1.0
3,562,103	-		Pf1N1B4_3180	0.19	-0.6
3,562,103	-		Pf1N1B4_3180	0.19	+0.3
3,562,103	-		Pf1N1B4_3180	0.19	+0.5
3,562,103	-		Pf1N1B4_3180	0.19	-0.6
3,562,138	+		Pf1N1B4_3180	0.22	+0.0
3,562,139	-		Pf1N1B4_3180	0.22	+0.3
3,562,139	-		Pf1N1B4_3180	0.22	-0.4
3,562,139	-		Pf1N1B4_3180	0.22	+1.0
3,562,139	-		Pf1N1B4_3180	0.22	+0.4
3,562,139	-		Pf1N1B4_3180	0.22	-0.4
3,562,139	-		Pf1N1B4_3180	0.22	+1.2
3,562,139	-		Pf1N1B4_3180	0.22	-1.0
3,562,139	-		Pf1N1B4_3180	0.22	+1.0
3,562,219	+		Pf1N1B4_3180	0.26	+0.0
3,562,219	+		Pf1N1B4_3180	0.26	-0.3
3,562,219	+		Pf1N1B4_3180	0.26	-0.3
3,562,220	-		Pf1N1B4_3180	0.26	+0.5
3,562,220	-		Pf1N1B4_3180	0.26	-2.2
3,562,220	-		Pf1N1B4_3180	0.26	+0.0
3,562,220	-		Pf1N1B4_3180	0.26	+0.7
3,562,332	+		Pf1N1B4_3180	0.33	+0.3
3,562,332	+		Pf1N1B4_3180	0.33	-1.4
3,562,332	+		Pf1N1B4_3180	0.33	-2.0