Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3177

Experiment: L-Citrulline (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (N)
3,558,181	+		Pf1N1B4_3176	0.17	-0.1
3,558,322	+		Pf1N1B4_3176	0.29	-2.3
3,558,323	-		Pf1N1B4_3176	0.29	-2.6
3,558,533	-		Pf1N1B4_3176	0.48	+1.6
3,558,577	+		Pf1N1B4_3176	0.52	+0.4
3,558,577	+		Pf1N1B4_3176	0.52	-0.4
3,558,577	+		Pf1N1B4_3176	0.52	-1.0
3,558,577	+		Pf1N1B4_3176	0.52	+0.0
3,558,578	-		Pf1N1B4_3176	0.52	-0.6
3,558,578	-		Pf1N1B4_3176	0.52	+0.2
3,558,735	-		Pf1N1B4_3176	0.66	-0.3
3,559,012	+				+0.0
3,559,012	+				+1.6
3,559,012	+				-0.8
3,559,012	+				+0.6
3,559,013	-				-1.3
3,559,013	-				+1.0
3,559,013	-				-0.6
3,559,114	+				+0.0
3,559,114	+				-0.0
3,559,114	+				+2.0
3,559,114	+				-0.6
3,559,114	+				+0.7
3,559,115	-				+1.0
3,559,115	-				+1.0
3,559,127	-				-0.6
3,559,207	+		Pf1N1B4_3177	0.12	+1.6
3,559,207	+		Pf1N1B4_3177	0.12	+1.0
3,559,208	-		Pf1N1B4_3177	0.12	-1.2
3,559,281	+				+0.6
3,559,281	+		Pf1N1B4_3177	0.22	+0.3
3,559,348	+		Pf1N1B4_3177	0.31	+1.6
3,559,348	+		Pf1N1B4_3177	0.31	+0.3
3,559,348	+		Pf1N1B4_3177	0.31	+0.0
3,559,348	+		Pf1N1B4_3177	0.31	+0.0
3,559,348	+		Pf1N1B4_3177	0.31	+0.5
3,559,349	-		Pf1N1B4_3177	0.32	-0.6
3,559,349	-		Pf1N1B4_3177	0.32	-1.0
3,559,351	+		Pf1N1B4_3177	0.32	-1.2
3,559,351	+		Pf1N1B4_3177	0.32	+0.7
3,559,351	+		Pf1N1B4_3177	0.32	+0.0
3,559,351	+		Pf1N1B4_3177	0.32	+1.6
3,559,352	-		Pf1N1B4_3177	0.32	-0.4
3,559,390	+		Pf1N1B4_3177	0.37	+0.0
3,559,390	+		Pf1N1B4_3177	0.37	-0.7
3,559,391	-		Pf1N1B4_3177	0.37	-0.4
3,559,391	-		Pf1N1B4_3177	0.37	-1.0
3,559,397	-		Pf1N1B4_3177	0.38	-0.1
3,559,397	-		Pf1N1B4_3177	0.38	-0.3
3,559,420	+		Pf1N1B4_3177	0.41	+0.4
3,559,489	+		Pf1N1B4_3177	0.51	-0.4
3,559,489	+		Pf1N1B4_3177	0.51	+0.0
3,559,588	+		Pf1N1B4_3177	0.65	+1.0
3,559,588	+		Pf1N1B4_3177	0.65	-0.3
3,559,588	+		Pf1N1B4_3177	0.65	-1.0
3,559,589	-		Pf1N1B4_3177	0.65	-1.0
3,559,589	-		Pf1N1B4_3177	0.65	+1.6
3,559,600	+		Pf1N1B4_3177	0.67	-1.0
3,559,601	-		Pf1N1B4_3177	0.67	-2.0
3,559,620	-		Pf1N1B4_3177	0.70	+0.4
3,559,621	+		Pf1N1B4_3177	0.70	+2.6
3,559,621	+		Pf1N1B4_3177	0.70	-0.1
3,559,621	+		Pf1N1B4_3177	0.70	+0.4
3,559,621	+		Pf1N1B4_3177	0.70	-1.0
3,559,621	+		Pf1N1B4_3177	0.70	-0.4
3,559,621	+		Pf1N1B4_3177	0.70	+1.3
3,559,621	+		Pf1N1B4_3177	0.70	-0.4
3,559,621	+		Pf1N1B4_3177	0.70	+2.0
3,559,621	+		Pf1N1B4_3177	0.70	-1.0
3,559,622	-		Pf1N1B4_3177	0.70	-0.2
3,559,622	-		Pf1N1B4_3177	0.70	-0.7
3,559,622	-				+1.0
3,559,622	-		Pf1N1B4_3177	0.70	-1.3
3,559,622	-		Pf1N1B4_3177	0.70	-1.0
3,559,645	+		Pf1N1B4_3177	0.73	-0.5
3,559,645	+		Pf1N1B4_3177	0.73	+2.6
3,559,646	-		Pf1N1B4_3177	0.73	+1.0
3,559,646	-		Pf1N1B4_3177	0.73	+0.6
3,559,646	-		Pf1N1B4_3177	0.73	+0.0
3,559,646	-		Pf1N1B4_3177	0.73	+0.6
3,559,646	-		Pf1N1B4_3177	0.73	+1.2
3,559,651	+		Pf1N1B4_3177	0.74	+1.0
3,559,651	+		Pf1N1B4_3177	0.74	+2.0
3,559,651	+		Pf1N1B4_3177	0.74	-0.7
3,559,651	+		Pf1N1B4_3177	0.74	-0.6
3,559,651	+		Pf1N1B4_3177	0.74	-1.0
3,559,651	+		Pf1N1B4_3177	0.74	+0.0
3,559,652	-		Pf1N1B4_3177	0.74	+0.0
3,559,652	-		Pf1N1B4_3177	0.74	-0.6
3,559,652	-		Pf1N1B4_3177	0.74	+1.3
3,559,675	+		Pf1N1B4_3177	0.77	-1.0
3,559,675	+		Pf1N1B4_3177	0.77	-0.4
3,559,675	+		Pf1N1B4_3177	0.77	+0.4
3,559,675	+		Pf1N1B4_3177	0.77	+1.6
3,559,675	+		Pf1N1B4_3177	0.77	-1.3
3,559,676	-		Pf1N1B4_3177	0.77	+0.4
3,559,676	-		Pf1N1B4_3177	0.77	-0.4
3,559,676	-				+2.6
3,559,676	-		Pf1N1B4_3177	0.77	+1.0
3,559,783	+				-0.1
3,559,793	+				+0.6
3,559,794	-				+2.0
3,559,796	-				-2.3
3,559,796	-				+2.8
3,559,796	-				+1.0
3,559,813	+				-1.0
3,559,813	+				+0.5
3,559,945	-		Pf1N1B4_3178	0.16	-1.0
3,559,945	-		Pf1N1B4_3178	0.16	+2.0
3,559,956	+		Pf1N1B4_3178	0.17	-0.3
3,559,956	+		Pf1N1B4_3178	0.17	+0.5
3,559,956	+		Pf1N1B4_3178	0.17	+0.0
3,559,957	-		Pf1N1B4_3178	0.17	-1.0
3,559,957	-		Pf1N1B4_3178	0.17	-0.1
3,559,957	-				+0.0
3,560,131	-		Pf1N1B4_3178	0.41	+0.0
3,560,199	+		Pf1N1B4_3178	0.50	-1.3
3,560,199	+		Pf1N1B4_3178	0.50	+2.2
3,560,199	+				+0.0
3,560,199	+				+0.0
3,560,199	+		Pf1N1B4_3178	0.50	+0.0
3,560,200	-		Pf1N1B4_3178	0.50	+1.0
3,560,200	-		Pf1N1B4_3178	0.50	+0.0
3,560,208	+		Pf1N1B4_3178	0.52	+1.0
3,560,208	+		Pf1N1B4_3178	0.52	+1.6
3,560,208	+		Pf1N1B4_3178	0.52	+0.6
3,560,208	+		Pf1N1B4_3178	0.52	-0.4
3,560,209	-		Pf1N1B4_3178	0.52	-0.7
3,560,209	-		Pf1N1B4_3178	0.52	+0.3
3,560,259	+		Pf1N1B4_3178	0.59	+1.6
3,560,259	+		Pf1N1B4_3178	0.59	-0.4
3,560,259	+		Pf1N1B4_3178	0.59	+0.7
3,560,259	+		Pf1N1B4_3178	0.59	+0.0
3,560,260	-				+1.0
3,560,260	-		Pf1N1B4_3178	0.59	+0.0
3,560,260	-		Pf1N1B4_3178	0.59	-0.5
3,560,260	-		Pf1N1B4_3178	0.59	-2.3
3,560,260	-		Pf1N1B4_3178	0.59	-2.3
3,560,260	-		Pf1N1B4_3178	0.59	+0.3
3,560,311	-		Pf1N1B4_3178	0.66	+2.3
3,560,364	+		Pf1N1B4_3178	0.73	+0.9
3,560,364	+		Pf1N1B4_3178	0.73	-0.7
3,560,365	-		Pf1N1B4_3178	0.73	+0.6
3,560,365	-		Pf1N1B4_3178	0.73	+1.3
3,560,543	+				-0.8
3,560,543	+				+1.2
3,560,544	-				+0.7
3,560,546	+				+0.4
3,560,560	+				+0.6
3,560,561	-				+1.2
3,560,561	-				-2.2
3,560,561	-				-0.6
3,560,561	-				-0.7
3,560,561	-				-0.8
3,560,619	-				-1.0
3,560,619	-				+0.0
3,560,619	-				+2.0
3,560,619	-				-1.0
3,560,619	-				+0.7
3,560,673	-				-0.4
3,560,700	+				-0.6
3,560,700	+		Pf1N1B4_3179	0.11	+0.4
3,560,733	+		Pf1N1B4_3179	0.15	-0.4
3,560,734	-		Pf1N1B4_3179	0.15	-0.8
3,560,740	-		Pf1N1B4_3179	0.16	+0.0
3,560,740	-		Pf1N1B4_3179	0.16	+1.9
3,560,740	-		Pf1N1B4_3179	0.16	+0.8
3,560,745	+		Pf1N1B4_3179	0.16	+0.1