Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26615

Experiment: D-Gluconic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26610 and BWI76_RS26615 are separated by 209 nucleotidesBWI76_RS26615 and BWI76_RS26620 are separated by 331 nucleotidesBWI76_RS26620 and BWI76_RS26625 are separated by 58 nucleotides BWI76_RS26610: BWI76_RS26610 - oligopeptidase A, at 5,507,801 to 5,509,843 _RS26610 BWI76_RS26615: BWI76_RS26615 - gluconate:H+ symporter (from data), at 5,510,053 to 5,511,369 _RS26615 BWI76_RS26620: BWI76_RS26620 - Fe-S biogenesis protein NfuA, at 5,511,701 to 5,512,276 _RS26620 BWI76_RS26625: BWI76_RS26625 - gluconate transporter periplasmic gluconate-binding protein, at 5,512,335 to 5,513,009 _RS26625 Position (kb) 5510 5511 5512Strain fitness (log2 ratio) -3 -2 -1 0 1at 5509.142 kb on - strand, within BWI76_RS26610at 5509.153 kb on + strand, within BWI76_RS26610at 5509.311 kb on + strand, within BWI76_RS26610at 5509.351 kb on - strand, within BWI76_RS26610at 5509.412 kb on - strand, within BWI76_RS26610at 5509.473 kb on + strand, within BWI76_RS26610at 5509.473 kb on + strand, within BWI76_RS26610at 5509.473 kb on + strand, within BWI76_RS26610at 5509.478 kb on - strand, within BWI76_RS26610at 5509.480 kb on + strand, within BWI76_RS26610at 5509.483 kb on - strand, within BWI76_RS26610at 5509.492 kb on - strand, within BWI76_RS26610at 5509.515 kb on - strand, within BWI76_RS26610at 5509.538 kb on - strand, within BWI76_RS26610at 5509.708 kb on - strandat 5509.773 kb on + strandat 5509.854 kb on + strandat 5510.041 kb on - strandat 5510.082 kb on + strandat 5510.127 kb on + strandat 5510.368 kb on + strand, within BWI76_RS26615at 5510.438 kb on - strand, within BWI76_RS26615at 5510.629 kb on + strand, within BWI76_RS26615at 5510.667 kb on + strand, within BWI76_RS26615at 5510.687 kb on + strand, within BWI76_RS26615at 5510.844 kb on + strand, within BWI76_RS26615at 5510.848 kb on + strand, within BWI76_RS26615at 5510.922 kb on - strand, within BWI76_RS26615at 5511.026 kb on + strand, within BWI76_RS26615at 5511.031 kb on + strand, within BWI76_RS26615at 5511.253 kb on - strandat 5511.370 kb on + strandat 5511.658 kb on - strandat 5511.659 kb on + strandat 5511.664 kb on - strandat 5512.114 kb on - strand, within BWI76_RS26620at 5512.362 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Gluconic Acid (C)
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5,509,142 - BWI76_RS26610 0.66 -0.1
5,509,153 + BWI76_RS26610 0.66 -1.2
5,509,311 + BWI76_RS26610 0.74 +0.1
5,509,351 - BWI76_RS26610 0.76 +1.1
5,509,412 - BWI76_RS26610 0.79 -0.4
5,509,473 + BWI76_RS26610 0.82 +0.0
5,509,473 + BWI76_RS26610 0.82 -0.1
5,509,473 + BWI76_RS26610 0.82 -0.8
5,509,478 - BWI76_RS26610 0.82 -0.3
5,509,480 + BWI76_RS26610 0.82 -0.0
5,509,483 - BWI76_RS26610 0.82 -1.4
5,509,492 - BWI76_RS26610 0.83 +0.5
5,509,515 - BWI76_RS26610 0.84 +0.7
5,509,538 - BWI76_RS26610 0.85 +0.5
5,509,708 - -0.4
5,509,773 + -0.3
5,509,854 + -0.6
5,510,041 - +0.6
5,510,082 + -3.0
5,510,127 + -2.9
5,510,368 + BWI76_RS26615 0.24 -1.7
5,510,438 - BWI76_RS26615 0.29 -1.7
5,510,629 + BWI76_RS26615 0.44 -1.3
5,510,667 + BWI76_RS26615 0.47 -2.2
5,510,687 + BWI76_RS26615 0.48 -1.4
5,510,844 + BWI76_RS26615 0.60 -2.5
5,510,848 + BWI76_RS26615 0.60 -1.2
5,510,922 - BWI76_RS26615 0.66 -1.4
5,511,026 + BWI76_RS26615 0.74 -2.8
5,511,031 + BWI76_RS26615 0.74 -1.2
5,511,253 - -2.7
5,511,370 + +1.1
5,511,658 - -0.2
5,511,659 + +0.2
5,511,664 - -0.1
5,512,114 - BWI76_RS26620 0.72 -0.8
5,512,362 - -1.8

Or see this region's nucleotide sequence