Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2089

Experiment: Rifampicin 0.0003125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0003125 mg/ml
2,167,919	-				-2.6
2,167,934	+				+1.7
2,167,934	+				-2.7
2,167,934	+				-0.4
2,167,934	+				+1.3
2,167,934	-				+0.8
2,167,934	-				-1.6
2,167,982	+				-0.7
2,167,982	+				+3.1
2,167,990	-				-0.2
2,167,990	-				-1.3
2,168,012	-				-2.9
2,168,023	+				-2.9
2,168,030	+				-0.6
2,168,046	-		Synpcc7942_2088	0.14	-0.1
2,168,104	+		Synpcc7942_2088	0.32	+0.7
2,168,104	+		Synpcc7942_2088	0.32	-0.7
2,168,159	-		Synpcc7942_2088	0.50	-0.1
2,168,180	+		Synpcc7942_2088	0.57	+0.3
2,168,201	+		Synpcc7942_2088	0.63	+0.9
2,168,239	+		Synpcc7942_2088	0.75	+1.1
2,168,253	+		Synpcc7942_2088	0.80	-1.7
2,168,258	+		Synpcc7942_2088	0.81	+0.7
2,168,261	-		Synpcc7942_2088	0.82	-1.7
2,168,266	-		Synpcc7942_2088	0.84	-1.3
2,168,266	-		Synpcc7942_2088	0.84	-1.4
2,168,269	+		Synpcc7942_2088	0.85	-2.6
2,168,274	+		Synpcc7942_2088	0.86	+2.6
2,168,274	+		Synpcc7942_2088	0.86	-0.1
2,168,277	-		Synpcc7942_2088	0.87	-1.3
2,168,282	-		Synpcc7942_2088	0.89	-0.7
2,168,303	+				-2.3
2,168,308	+				+1.6
2,168,316	-				-1.7
2,168,319	+				+0.3
2,168,357	-				+0.8
2,168,389	-				+0.3
2,168,390	-				+0.8
2,168,398	+				+0.5
2,168,406	-				+1.5
2,168,406	-				-1.4
2,168,422	+				-1.5
2,168,432	-				-0.0
2,168,464	+				-0.4
2,168,466	-				-2.1
2,168,489	+				+0.3
2,168,510	-				+1.0
2,168,510	-				-0.2
2,168,529	+				-0.7
2,168,529	+				+0.3
2,168,529	+				+0.9
2,168,529	+				+0.3
2,168,537	-				-2.1
2,168,537	-				+1.1
2,168,537	-				-1.3
2,168,537	-				-1.3
2,168,542	-				+0.3
2,168,579	+				+0.8
2,168,595	+				+0.5
2,168,651	+				-1.3
2,168,653	+				+0.3
2,168,685	-				-0.7
2,168,690	+				-1.3
2,168,698	-				+0.3
2,168,698	-				+1.7
2,169,582	+				+1.7
2,169,582	+				-1.3
2,169,582	+				+1.0
2,169,582	+				+0.3
2,169,582	+				+1.0
2,169,592	+				-0.1
2,169,592	+				+0.1
2,169,592	+				+4.3
2,169,592	+				+1.5
2,169,617	-				-2.1
2,169,672	-				-0.6
2,169,673	+				+1.5
2,169,679	-				+1.3
2,169,684	+				+0.4
2,169,706	-				+3.1
2,169,706	-				+0.3
2,169,732	-				+0.7
2,169,769	+				-0.1
2,169,777	-				-2.6
2,169,797	+				+1.7
2,169,802	+				-0.7