Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1516

Experiment: Rifampicin 0.0003125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0003125 mg/ml
1,565,337	-				+0.6
1,565,357	-				-1.7
1,565,364	-				+1.8
1,565,375	+				+1.8
1,565,383	-				+1.1
1,565,395	-				-0.7
1,565,410	+				+0.9
1,565,411	-				-1.8
1,565,442	-				-3.4
1,565,451	+				+0.6
1,565,452	-				-0.2
1,565,538	+		Synpcc7942_1515	0.16	-1.4
1,565,551	+		Synpcc7942_1515	0.18	+0.2
1,565,569	-		Synpcc7942_1515	0.20	+0.8
1,565,571	+		Synpcc7942_1515	0.20	-2.4
1,565,594	-		Synpcc7942_1515	0.23	-1.0
1,565,609	+		Synpcc7942_1515	0.24	-0.4
1,565,622	-		Synpcc7942_1515	0.26	+0.2
1,565,629	+		Synpcc7942_1515	0.26	-0.2
1,565,637	-		Synpcc7942_1515	0.27	-2.8
1,565,671	+		Synpcc7942_1515	0.31	+0.9
1,565,701	+		Synpcc7942_1515	0.34	+1.0
1,565,724	+		Synpcc7942_1515	0.37	-0.8
1,565,726	+		Synpcc7942_1515	0.37	-0.1
1,565,732	-		Synpcc7942_1515	0.38	-0.3
1,565,739	-		Synpcc7942_1515	0.39	+0.7
1,565,741	+		Synpcc7942_1515	0.39	+1.2
1,565,752	+		Synpcc7942_1515	0.40	-0.2
1,565,847	-		Synpcc7942_1515	0.51	+0.9
1,565,850	+		Synpcc7942_1515	0.51	+1.4
1,565,850	-		Synpcc7942_1515	0.51	+0.8
1,565,870	+		Synpcc7942_1515	0.53	+0.2
1,565,905	-		Synpcc7942_1515	0.57	+1.0
1,565,939	+		Synpcc7942_1515	0.61	+2.1
1,565,962	+		Synpcc7942_1515	0.63	-0.2
1,565,969	-		Synpcc7942_1515	0.64	-1.7
1,565,973	+		Synpcc7942_1515	0.65	-0.8
1,565,973	+		Synpcc7942_1515	0.65	-0.2
1,565,981	-		Synpcc7942_1515	0.66	+0.5
1,565,981	-		Synpcc7942_1515	0.66	+1.1
1,566,037	-		Synpcc7942_1515	0.72	-0.5
1,566,040	+		Synpcc7942_1515	0.72	+1.2
1,566,042	-		Synpcc7942_1515	0.72	+0.3
1,566,084	-		Synpcc7942_1515	0.77	-0.3
1,566,099	-		Synpcc7942_1515	0.79	-1.5
1,566,135	-		Synpcc7942_1515	0.83	-0.8
1,566,153	+		Synpcc7942_1515	0.85	+1.7
1,566,176	+		Synpcc7942_1515	0.87	-0.6
1,566,176	+		Synpcc7942_1515	0.87	-1.7
1,566,233	+				+1.4
1,566,240	-				-1.0
1,566,240	-				+0.2
1,566,240	-				-2.8
1,566,241	-				-1.2
1,566,272	+				+0.6
1,566,284	+				+3.1
1,566,313	+				+1.7
1,566,353	+				-2.8
1,566,355	-				-0.4
1,566,490	+		Synpcc7942_1516	0.26	-2.4
1,566,559	+		Synpcc7942_1516	0.36	-1.8
1,566,981	+				+1.4
1,566,989	+				+0.2
1,566,989	+				-1.8
1,566,989	+				-5.0
1,566,989	+				-0.4
1,566,997	-				-0.0
1,567,675	-		Synpcc7942_1517	0.53	-1.4