Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0944
Experiment: Rifampicin 0.0003125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Rifampicin 0.0003125 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 951,518 | - | -2.7 | |||
| 952,790 | + | +0.3 | |||
| 952,841 | - | +0.9 | |||
| 952,855 | - | +0.6 | |||
| 953,031 | + | Synpcc7942_0945 | 0.24 | +0.1 | |
| 953,096 | + | Synpcc7942_0945 | 0.31 | +2.3 | |
| 953,191 | + | Synpcc7942_0945 | 0.41 | +0.1 | |
| 953,425 | + | Synpcc7942_0945 | 0.65 | -1.9 | |
| 953,443 | - | Synpcc7942_0945 | 0.67 | +1.1 | |
| 953,514 | + | Synpcc7942_0945 | 0.74 | +0.1 | |
| 953,613 | - | Synpcc7942_0945 | 0.84 | -0.4 | |
| 953,613 | - | Synpcc7942_0945 | 0.84 | +1.4 | |
| 953,648 | - | Synpcc7942_0945 | 0.88 | +1.6 | |
| 953,650 | - | Synpcc7942_0945 | 0.88 | -0.1 | |
| 953,652 | + | Synpcc7942_0945 | 0.88 | +0.1 | |
| 953,675 | + | +0.5 | |||
| 953,675 | + | -1.9 | |||
| 953,679 | + | -0.5 | |||
| 953,710 | + | +0.5 | |||
| 953,712 | + | +2.6 | |||
| 953,712 | + | -2.9 | |||
| 953,712 | + | +0.1 | |||
| 953,712 | + | -0.9 | |||
| 953,720 | - | -0.2 | |||
| 953,720 | - | +0.1 | |||
| 953,720 | - | +1.9 |
Or see this region's nucleotide sequence