Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0779

Experiment: Rifampicin 0.0003125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0003125 mg/ml
769,541	+				-1.3
769,549	-				-1.9
769,594	-				+1.0
770,006	+				+4.3
770,006	+				-1.9
770,006	+				+1.1
770,020	+				-0.7
770,032	+				-0.1
770,032	+				-0.6
770,032	+				+3.3
770,038	+				-0.7
770,040	-				+0.9
770,040	-				-0.9
770,040	-				+0.2
770,040	-				+1.1
770,040	-				-0.9
770,043	+				+0.7
770,051	+				+0.5
770,051	-				+1.2
770,051	-				+1.3
770,059	-				+2.1
770,074	-				+1.1
770,077	+				+1.7
770,077	+				+1.0
770,085	-				+0.6
770,087	-				-0.3
770,092	+				-0.5
770,110	-				+0.3
770,126	+				-0.8
770,126	+				+1.1
770,134	-				+0.2
770,134	-				-1.5
770,134	-				-0.4
770,148	+				-0.6
770,156	+				+0.7
770,190	-				+1.6
770,231	-				-0.8
770,289	-				+2.7
770,289	-				-2.0
770,346	-				+1.3
771,364	-		Synpcc7942_0779	0.50	-4.7
771,488	-				+0.1
772,439	-				-0.4
772,489	+				-1.5
772,567	+				+0.1
772,572	+				+0.2
772,572	+				+1.0
772,572	+				-0.9
772,638	+				+1.1
772,696	+				+0.1
772,696	+				+1.6
772,697	+				+1.1
772,705	-				+0.1
772,748	+		Synpcc7942_0780	0.12	+1.5
772,807	-		Synpcc7942_0780	0.16	-0.1
772,807	-		Synpcc7942_0780	0.16	-2.5
772,854	-		Synpcc7942_0780	0.20	-0.9
772,996	+		Synpcc7942_0780	0.30	-0.1
772,996	+		Synpcc7942_0780	0.30	+0.8
773,047	-		Synpcc7942_0780	0.34	+0.7
773,087	+		Synpcc7942_0780	0.37	+1.7
773,095	+		Synpcc7942_0780	0.37	+0.5
773,103	-				+0.1
773,103	-		Synpcc7942_0780	0.38	+1.4
773,136	+		Synpcc7942_0780	0.40	+0.3
773,144	-		Synpcc7942_0780	0.41	-0.9
773,160	-		Synpcc7942_0780	0.42	+0.7
773,160	-		Synpcc7942_0780	0.42	-0.5
773,160	-		Synpcc7942_0780	0.42	+1.0
773,191	+		Synpcc7942_0780	0.44	-2.5
773,230	+		Synpcc7942_0780	0.47	-1.5
773,268	+		Synpcc7942_0780	0.50	-0.8
773,276	-		Synpcc7942_0780	0.50	+0.1
773,298	-		Synpcc7942_0780	0.52	+0.1
773,337	+		Synpcc7942_0780	0.55	-1.7
773,340	-		Synpcc7942_0780	0.55	-0.9
773,351	+		Synpcc7942_0780	0.56	+0.7
773,351	+		Synpcc7942_0780	0.56	+2.1
773,357	-		Synpcc7942_0780	0.56	+1.4
773,359	-		Synpcc7942_0780	0.56	+0.5
773,359	-		Synpcc7942_0780	0.56	-1.5
773,359	-		Synpcc7942_0780	0.56	-0.1
773,372	-		Synpcc7942_0780	0.57	+1.7
773,380	-		Synpcc7942_0780	0.58	-0.9
773,382	-		Synpcc7942_0780	0.58	+0.7
773,382	-		Synpcc7942_0780	0.58	-0.9
773,388	-		Synpcc7942_0780	0.58	-1.5
773,388	-		Synpcc7942_0780	0.58	+2.7
773,402	+		Synpcc7942_0780	0.59	+0.2
773,402	+		Synpcc7942_0780	0.59	+0.1
773,402	+		Synpcc7942_0780	0.59	+0.3
773,402	+		Synpcc7942_0780	0.59	-2.2
773,410	-		Synpcc7942_0780	0.60	+0.4
773,415	-		Synpcc7942_0780	0.60	-0.5
773,431	-		Synpcc7942_0780	0.62	-2.6
773,432	-		Synpcc7942_0780	0.62	+1.3
773,458	+		Synpcc7942_0780	0.64	+1.3
773,458	+		Synpcc7942_0780	0.64	+0.2
773,466	-		Synpcc7942_0780	0.64	-0.9
773,466	-		Synpcc7942_0780	0.64	+1.1
773,483	+		Synpcc7942_0780	0.65	+0.5
773,483	+		Synpcc7942_0780	0.65	-0.1
773,483	+		Synpcc7942_0780	0.65	-1.5
773,491	-				+0.1
773,491	-		Synpcc7942_0780	0.66	-0.2
773,550	+		Synpcc7942_0780	0.70	+0.8
773,550	+		Synpcc7942_0780	0.70	-1.8
773,558	-		Synpcc7942_0780	0.71	+0.4
773,558	-		Synpcc7942_0780	0.71	+1.2
773,586	-		Synpcc7942_0780	0.73	+1.3
773,592	-		Synpcc7942_0780	0.73	-1.5