Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26620

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26615 and BWI76_RS26620 are separated by 331 nucleotidesBWI76_RS26620 and BWI76_RS26625 are separated by 58 nucleotidesBWI76_RS26625 and BWI76_RS26630 are separated by 37 nucleotides BWI76_RS26615: BWI76_RS26615 - gluconate:H+ symporter (from data), at 5,510,053 to 5,511,369 _RS26615 BWI76_RS26620: BWI76_RS26620 - Fe-S biogenesis protein NfuA, at 5,511,701 to 5,512,276 _RS26620 BWI76_RS26625: BWI76_RS26625 - gluconate transporter periplasmic gluconate-binding protein, at 5,512,335 to 5,513,009 _RS26625 BWI76_RS26630: BWI76_RS26630 - pimeloyl-[acyl-carrier protein] methyl ester esterase, at 5,513,047 to 5,513,829 _RS26630 Position (kb) 5511 5512 5513Strain fitness (log2 ratio) -1 0 1at 5510.844 kb on + strand, within BWI76_RS26615at 5510.848 kb on + strand, within BWI76_RS26615at 5510.922 kb on - strand, within BWI76_RS26615at 5511.026 kb on + strand, within BWI76_RS26615at 5511.031 kb on + strand, within BWI76_RS26615at 5511.253 kb on - strandat 5511.370 kb on + strandat 5511.658 kb on - strandat 5511.659 kb on + strandat 5511.664 kb on - strandat 5512.114 kb on - strand, within BWI76_RS26620at 5512.362 kb on - strandat 5512.511 kb on + strand, within BWI76_RS26625at 5512.734 kb on + strand, within BWI76_RS26625at 5512.743 kb on - strand, within BWI76_RS26625at 5512.770 kb on - strand, within BWI76_RS26625at 5512.860 kb on + strand, within BWI76_RS26625at 5513.030 kb on + strandat 5513.108 kb on + strandat 5513.138 kb on + strand, within BWI76_RS26630at 5513.141 kb on - strand, within BWI76_RS26630

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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5,510,844 + BWI76_RS26615 0.60 +0.2
5,510,848 + BWI76_RS26615 0.60 +1.4
5,510,922 - BWI76_RS26615 0.66 +1.3
5,511,026 + BWI76_RS26615 0.74 -0.1
5,511,031 + BWI76_RS26615 0.74 +1.3
5,511,253 - -0.1
5,511,370 + +1.0
5,511,658 - +0.7
5,511,659 + -0.1
5,511,664 - -0.7
5,512,114 - BWI76_RS26620 0.72 -1.2
5,512,362 - -1.3
5,512,511 + BWI76_RS26625 0.26 -0.7
5,512,734 + BWI76_RS26625 0.59 +0.8
5,512,743 - BWI76_RS26625 0.60 +0.7
5,512,770 - BWI76_RS26625 0.64 +0.4
5,512,860 + BWI76_RS26625 0.78 -0.9
5,513,030 + +0.0
5,513,108 + -1.0
5,513,138 + BWI76_RS26630 0.12 -0.0
5,513,141 - BWI76_RS26630 0.12 +0.4

Or see this region's nucleotide sequence