Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26065 and BWI76_RS26070 overlap by 8 nucleotides BWI76_RS26070 and BWI76_RS26075 are separated by 17 nucleotides BWI76_RS26075 and BWI76_RS26080 are separated by 78 nucleotides
BWI76_RS26065: BWI76_RS26065 - phosphoglycolate phosphatase, at 5,386,437 to 5,387,186
_RS26065
BWI76_RS26070: BWI76_RS26070 - ribulose-phosphate 3-epimerase, at 5,387,179 to 5,387,856
_RS26070
BWI76_RS26075: BWI76_RS26075 - DNA adenine methylase, at 5,387,874 to 5,388,701
_RS26075
BWI76_RS26080: BWI76_RS26080 - cell division protein DamX, at 5,388,780 to 5,390,093
_RS26080
Position (kb) 5387
5388
5389 Strain fitness (log2 ratio) -2
-1
0
1 at 5386.993 kb on + strand, within BWI76_RS26065 at 5387.143 kb on - strand at 5387.194 kb on - strand at 5387.903 kb on - strand at 5388.260 kb on + strand, within BWI76_RS26075 at 5388.314 kb on - strand, within BWI76_RS26075 at 5388.314 kb on - strand, within BWI76_RS26075 at 5388.432 kb on - strand, within BWI76_RS26075 at 5388.454 kb on + strand, within BWI76_RS26075 at 5388.513 kb on + strand, within BWI76_RS26075 at 5388.557 kb on - strand, within BWI76_RS26075 at 5388.805 kb on - strand at 5388.873 kb on - strand at 5388.908 kb on - strand at 5388.910 kb on + strand at 5388.910 kb on + strand at 5388.944 kb on - strand, within BWI76_RS26080 at 5388.997 kb on - strand, within BWI76_RS26080 at 5389.031 kb on - strand, within BWI76_RS26080 at 5389.035 kb on - strand, within BWI76_RS26080 at 5389.045 kb on - strand, within BWI76_RS26080 at 5389.045 kb on - strand, within BWI76_RS26080 at 5389.503 kb on + strand, within BWI76_RS26080 at 5389.535 kb on - strand, within BWI76_RS26080 at 5389.670 kb on + strand, within BWI76_RS26080 at 5389.675 kb on + strand, within BWI76_RS26080
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 5,386,993 + BWI76_RS26065 0.74 -1.3 5,387,143 - -1.8 5,387,194 - +0.3 5,387,903 - +1.0 5,388,260 + BWI76_RS26075 0.47 -2.2 5,388,314 - BWI76_RS26075 0.53 -1.3 5,388,314 - BWI76_RS26075 0.53 -0.7 5,388,432 - BWI76_RS26075 0.67 -1.0 5,388,454 + BWI76_RS26075 0.70 -0.6 5,388,513 + BWI76_RS26075 0.77 +0.5 5,388,557 - BWI76_RS26075 0.82 -2.3 5,388,805 - +0.1 5,388,873 - -0.2 5,388,908 - -0.1 5,388,910 + -0.2 5,388,910 + -0.2 5,388,944 - BWI76_RS26080 0.12 -1.0 5,388,997 - BWI76_RS26080 0.17 -0.5 5,389,031 - BWI76_RS26080 0.19 -0.1 5,389,035 - BWI76_RS26080 0.19 +0.4 5,389,045 - BWI76_RS26080 0.20 -0.4 5,389,045 - BWI76_RS26080 0.20 +0.2 5,389,503 + BWI76_RS26080 0.55 -1.2 5,389,535 - BWI76_RS26080 0.57 +0.2 5,389,670 + BWI76_RS26080 0.68 +0.3 5,389,675 + BWI76_RS26080 0.68 -1.6
Or see this region's nucleotide sequence