Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS25465

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS25460 and BWI76_RS25465 overlap by 4 nucleotidesBWI76_RS25465 and BWI76_RS25470 are separated by 58 nucleotides BWI76_RS25460: BWI76_RS25460 - transcriptional regulator, at 5,289,757 to 5,290,686 _RS25460 BWI76_RS25465: BWI76_RS25465 - transcriptional regulator, at 5,290,683 to 5,291,429 _RS25465 BWI76_RS25470: BWI76_RS25470 - metalloprotease TldD, at 5,291,488 to 5,292,933 _RS25470 Position (kb) 5290 5291 5292Strain fitness (log2 ratio) -1 0 1at 5289.920 kb on + strand, within BWI76_RS25460at 5289.928 kb on - strand, within BWI76_RS25460at 5289.952 kb on + strand, within BWI76_RS25460at 5290.002 kb on + strand, within BWI76_RS25460at 5290.009 kb on - strand, within BWI76_RS25460at 5290.109 kb on + strand, within BWI76_RS25460at 5290.168 kb on + strand, within BWI76_RS25460at 5290.169 kb on + strand, within BWI76_RS25460at 5290.396 kb on + strand, within BWI76_RS25460at 5290.396 kb on - strand, within BWI76_RS25460at 5290.404 kb on - strand, within BWI76_RS25460at 5290.456 kb on - strand, within BWI76_RS25460at 5290.482 kb on - strand, within BWI76_RS25460at 5290.603 kb on - strandat 5290.656 kb on + strandat 5290.697 kb on - strandat 5290.834 kb on + strandat 5290.966 kb on + strand, within BWI76_RS25465at 5290.974 kb on - strand, within BWI76_RS25465at 5290.995 kb on + strand, within BWI76_RS25465at 5291.042 kb on + strand, within BWI76_RS25465at 5291.283 kb on - strand, within BWI76_RS25465at 5291.290 kb on - strand, within BWI76_RS25465at 5291.348 kb on - strand, within BWI76_RS25465at 5291.485 kb on + strandat 5291.656 kb on + strand, within BWI76_RS25470at 5291.663 kb on - strand, within BWI76_RS25470at 5291.819 kb on - strand, within BWI76_RS25470at 5291.843 kb on + strand, within BWI76_RS25470at 5291.918 kb on + strand, within BWI76_RS25470at 5292.057 kb on + strand, within BWI76_RS25470at 5292.057 kb on + strand, within BWI76_RS25470at 5292.065 kb on - strand, within BWI76_RS25470at 5292.065 kb on - strand, within BWI76_RS25470at 5292.159 kb on + strand, within BWI76_RS25470at 5292.159 kb on + strand, within BWI76_RS25470

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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5,289,920 + BWI76_RS25460 0.18 +0.3
5,289,928 - BWI76_RS25460 0.18 +1.3
5,289,952 + BWI76_RS25460 0.21 -0.6
5,290,002 + BWI76_RS25460 0.26 +0.1
5,290,009 - BWI76_RS25460 0.27 +0.0
5,290,109 + BWI76_RS25460 0.38 +0.1
5,290,168 + BWI76_RS25460 0.44 -0.3
5,290,169 + BWI76_RS25460 0.44 -0.0
5,290,396 + BWI76_RS25460 0.69 -0.7
5,290,396 - BWI76_RS25460 0.69 -0.0
5,290,404 - BWI76_RS25460 0.70 -0.4
5,290,456 - BWI76_RS25460 0.75 +0.5
5,290,482 - BWI76_RS25460 0.78 -0.5
5,290,603 - -0.1
5,290,656 + -0.6
5,290,697 - +0.3
5,290,834 + +1.0
5,290,966 + BWI76_RS25465 0.38 -0.0
5,290,974 - BWI76_RS25465 0.39 -0.8
5,290,995 + BWI76_RS25465 0.42 +0.5
5,291,042 + BWI76_RS25465 0.48 -0.2
5,291,283 - BWI76_RS25465 0.80 +0.3
5,291,290 - BWI76_RS25465 0.81 +0.0
5,291,348 - BWI76_RS25465 0.89 -0.0
5,291,485 + -0.6
5,291,656 + BWI76_RS25470 0.12 +0.0
5,291,663 - BWI76_RS25470 0.12 +0.7
5,291,819 - BWI76_RS25470 0.23 -0.0
5,291,843 + BWI76_RS25470 0.25 -0.5
5,291,918 + BWI76_RS25470 0.30 -0.2
5,292,057 + BWI76_RS25470 0.39 -0.6
5,292,057 + BWI76_RS25470 0.39 +1.0
5,292,065 - BWI76_RS25470 0.40 +0.8
5,292,065 - BWI76_RS25470 0.40 -0.1
5,292,159 + BWI76_RS25470 0.46 +0.0
5,292,159 + BWI76_RS25470 0.46 +0.6

Or see this region's nucleotide sequence