Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25460 and BWI76_RS25465 overlap by 4 nucleotides BWI76_RS25465 and BWI76_RS25470 are separated by 58 nucleotides
BWI76_RS25460: BWI76_RS25460 - transcriptional regulator, at 5,289,757 to 5,290,686
_RS25460
BWI76_RS25465: BWI76_RS25465 - transcriptional regulator, at 5,290,683 to 5,291,429
_RS25465
BWI76_RS25470: BWI76_RS25470 - metalloprotease TldD, at 5,291,488 to 5,292,933
_RS25470
Position (kb) 5290
5291
5292 Strain fitness (log2 ratio) -1
0
1 at 5289.920 kb on + strand, within BWI76_RS25460 at 5289.928 kb on - strand, within BWI76_RS25460 at 5289.952 kb on + strand, within BWI76_RS25460 at 5290.002 kb on + strand, within BWI76_RS25460 at 5290.009 kb on - strand, within BWI76_RS25460 at 5290.109 kb on + strand, within BWI76_RS25460 at 5290.168 kb on + strand, within BWI76_RS25460 at 5290.169 kb on + strand, within BWI76_RS25460 at 5290.396 kb on + strand, within BWI76_RS25460 at 5290.396 kb on - strand, within BWI76_RS25460 at 5290.404 kb on - strand, within BWI76_RS25460 at 5290.456 kb on - strand, within BWI76_RS25460 at 5290.482 kb on - strand, within BWI76_RS25460 at 5290.603 kb on - strand at 5290.656 kb on + strand at 5290.697 kb on - strand at 5290.834 kb on + strand at 5290.966 kb on + strand, within BWI76_RS25465 at 5290.974 kb on - strand, within BWI76_RS25465 at 5290.995 kb on + strand, within BWI76_RS25465 at 5291.042 kb on + strand, within BWI76_RS25465 at 5291.283 kb on - strand, within BWI76_RS25465 at 5291.290 kb on - strand, within BWI76_RS25465 at 5291.348 kb on - strand, within BWI76_RS25465 at 5291.485 kb on + strand at 5291.656 kb on + strand, within BWI76_RS25470 at 5291.663 kb on - strand, within BWI76_RS25470 at 5291.819 kb on - strand, within BWI76_RS25470 at 5291.843 kb on + strand, within BWI76_RS25470 at 5291.918 kb on + strand, within BWI76_RS25470 at 5292.057 kb on + strand, within BWI76_RS25470 at 5292.057 kb on + strand, within BWI76_RS25470 at 5292.065 kb on - strand, within BWI76_RS25470 at 5292.065 kb on - strand, within BWI76_RS25470 at 5292.159 kb on + strand, within BWI76_RS25470 at 5292.159 kb on + strand, within BWI76_RS25470
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 5,289,920 + BWI76_RS25460 0.18 +0.3 5,289,928 - BWI76_RS25460 0.18 +1.3 5,289,952 + BWI76_RS25460 0.21 -0.6 5,290,002 + BWI76_RS25460 0.26 +0.1 5,290,009 - BWI76_RS25460 0.27 +0.0 5,290,109 + BWI76_RS25460 0.38 +0.1 5,290,168 + BWI76_RS25460 0.44 -0.3 5,290,169 + BWI76_RS25460 0.44 -0.0 5,290,396 + BWI76_RS25460 0.69 -0.7 5,290,396 - BWI76_RS25460 0.69 -0.0 5,290,404 - BWI76_RS25460 0.70 -0.4 5,290,456 - BWI76_RS25460 0.75 +0.5 5,290,482 - BWI76_RS25460 0.78 -0.5 5,290,603 - -0.1 5,290,656 + -0.6 5,290,697 - +0.3 5,290,834 + +1.0 5,290,966 + BWI76_RS25465 0.38 -0.0 5,290,974 - BWI76_RS25465 0.39 -0.8 5,290,995 + BWI76_RS25465 0.42 +0.5 5,291,042 + BWI76_RS25465 0.48 -0.2 5,291,283 - BWI76_RS25465 0.80 +0.3 5,291,290 - BWI76_RS25465 0.81 +0.0 5,291,348 - BWI76_RS25465 0.89 -0.0 5,291,485 + -0.6 5,291,656 + BWI76_RS25470 0.12 +0.0 5,291,663 - BWI76_RS25470 0.12 +0.7 5,291,819 - BWI76_RS25470 0.23 -0.0 5,291,843 + BWI76_RS25470 0.25 -0.5 5,291,918 + BWI76_RS25470 0.30 -0.2 5,292,057 + BWI76_RS25470 0.39 -0.6 5,292,057 + BWI76_RS25470 0.39 +1.0 5,292,065 - BWI76_RS25470 0.40 +0.8 5,292,065 - BWI76_RS25470 0.40 -0.1 5,292,159 + BWI76_RS25470 0.46 +0.0 5,292,159 + BWI76_RS25470 0.46 +0.6
Or see this region's nucleotide sequence