Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23665 and BWI76_RS23670 are separated by 363 nucleotides BWI76_RS23670 and BWI76_RS23675 are separated by 109 nucleotides BWI76_RS23675 and BWI76_RS23680 are separated by 11 nucleotides
BWI76_RS23665: BWI76_RS23665 - 2-deoxyribose-5-phosphate aldolase, at 4,939,468 to 4,940,217
_RS23665
BWI76_RS23670: BWI76_RS23670 - alkaline phosphatase, at 4,940,581 to 4,941,381
_RS23670
BWI76_RS23675: BWI76_RS23675 - allulose-6-phosphate 3-epimerase, at 4,941,491 to 4,942,180
_RS23675
BWI76_RS23680: BWI76_RS23680 - ribokinase, at 4,942,192 to 4,943,133
_RS23680
Position (kb)
4940
4941
4942 Strain fitness (log2 ratio)
-2
-1
0
1 at 4939.828 kb on + strand, within BWI76_RS23665 at 4939.857 kb on - strand, within BWI76_RS23665 at 4939.879 kb on + strand, within BWI76_RS23665 at 4940.000 kb on + strand, within BWI76_RS23665 at 4940.042 kb on + strand, within BWI76_RS23665 at 4940.088 kb on + strand, within BWI76_RS23665 at 4940.093 kb on + strand, within BWI76_RS23665 at 4940.133 kb on - strand, within BWI76_RS23665 at 4940.133 kb on - strand, within BWI76_RS23665 at 4940.331 kb on - strand at 4940.466 kb on - strand at 4940.473 kb on + strand at 4940.566 kb on + strand at 4940.566 kb on + strand at 4940.571 kb on + strand at 4940.576 kb on + strand at 4940.579 kb on - strand at 4940.623 kb on + strand at 4941.022 kb on - strand, within BWI76_RS23670 at 4941.207 kb on - strand, within BWI76_RS23670 at 4941.266 kb on + strand, within BWI76_RS23670 at 4941.297 kb on + strand, within BWI76_RS23670 at 4941.343 kb on + strand at 4941.644 kb on - strand, within BWI76_RS23675 at 4941.832 kb on + strand, within BWI76_RS23675 at 4941.851 kb on + strand, within BWI76_RS23675 at 4941.860 kb on + strand, within BWI76_RS23675 at 4941.870 kb on + strand, within BWI76_RS23675 at 4941.878 kb on - strand, within BWI76_RS23675 at 4941.973 kb on + strand, within BWI76_RS23675 at 4942.073 kb on - strand, within BWI76_RS23675 at 4942.074 kb on - strand, within BWI76_RS23675 at 4942.123 kb on - strand at 4942.162 kb on - strand at 4942.239 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 4,939,828 + BWI76_RS23665 0.48 +0.2 4,939,857 - BWI76_RS23665 0.52 +0.5 4,939,879 + BWI76_RS23665 0.55 -0.1 4,940,000 + BWI76_RS23665 0.71 -0.5 4,940,042 + BWI76_RS23665 0.77 -0.1 4,940,088 + BWI76_RS23665 0.83 +0.4 4,940,093 + BWI76_RS23665 0.83 +1.0 4,940,133 - BWI76_RS23665 0.89 +0.7 4,940,133 - BWI76_RS23665 0.89 -2.1 4,940,331 - +1.2 4,940,466 - -0.2 4,940,473 + -0.1 4,940,566 + -0.5 4,940,566 + -0.2 4,940,571 + -0.0 4,940,576 + +0.0 4,940,579 - +0.4 4,940,623 + -1.2 4,941,022 - BWI76_RS23670 0.55 -0.3 4,941,207 - BWI76_RS23670 0.78 -0.3 4,941,266 + BWI76_RS23670 0.86 +0.2 4,941,297 + BWI76_RS23670 0.89 -0.1 4,941,343 + +1.0 4,941,644 - BWI76_RS23675 0.22 -0.2 4,941,832 + BWI76_RS23675 0.49 -1.3 4,941,851 + BWI76_RS23675 0.52 -1.0 4,941,860 + BWI76_RS23675 0.53 +0.3 4,941,870 + BWI76_RS23675 0.55 +0.6 4,941,878 - BWI76_RS23675 0.56 +0.8 4,941,973 + BWI76_RS23675 0.70 +0.1 4,942,073 - BWI76_RS23675 0.84 -0.3 4,942,074 - BWI76_RS23675 0.84 -0.4 4,942,123 - +0.8 4,942,162 - -0.5 4,942,239 + +1.0
Or see this region's nucleotide sequence