Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22470 and BWI76_RS22475 overlap by 8 nucleotides BWI76_RS22475 and BWI76_RS22480 are separated by 96 nucleotides BWI76_RS22480 and BWI76_RS22485 are separated by 760 nucleotides
BWI76_RS22470: BWI76_RS22470 - transporter permease, at 4,684,928 to 4,685,923
_RS22470
BWI76_RS22475: BWI76_RS22475 - heme ABC transporter ATP-binding protein, at 4,685,916 to 4,686,695
_RS22475
BWI76_RS22480: BWI76_RS22480 - lactaldehyde reductase, at 4,686,792 to 4,687,943
_RS22480
BWI76_RS22485: BWI76_RS22485 - hypothetical protein, at 4,688,704 to 4,689,024
_RS22485
Position (kb)
4686
4687
4688 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4685.798 kb on + strand, within BWI76_RS22470 at 4686.110 kb on - strand, within BWI76_RS22475 at 4686.228 kb on + strand, within BWI76_RS22475 at 4686.468 kb on + strand, within BWI76_RS22475 at 4686.530 kb on + strand, within BWI76_RS22475 at 4686.576 kb on + strand, within BWI76_RS22475 at 4686.638 kb on + strand at 4686.654 kb on + strand at 4686.682 kb on + strand at 4686.685 kb on - strand at 4686.690 kb on - strand at 4687.067 kb on - strand, within BWI76_RS22480 at 4687.102 kb on + strand, within BWI76_RS22480 at 4687.102 kb on + strand, within BWI76_RS22480 at 4687.148 kb on + strand, within BWI76_RS22480 at 4687.175 kb on - strand, within BWI76_RS22480 at 4687.214 kb on + strand, within BWI76_RS22480 at 4687.318 kb on - strand, within BWI76_RS22480 at 4687.350 kb on + strand, within BWI76_RS22480 at 4687.478 kb on - strand, within BWI76_RS22480 at 4687.583 kb on - strand, within BWI76_RS22480 at 4687.631 kb on + strand, within BWI76_RS22480 at 4687.631 kb on + strand, within BWI76_RS22480 at 4687.639 kb on - strand, within BWI76_RS22480 at 4687.639 kb on - strand, within BWI76_RS22480 at 4687.641 kb on + strand, within BWI76_RS22480 at 4687.644 kb on - strand, within BWI76_RS22480 at 4687.654 kb on - strand, within BWI76_RS22480 at 4687.691 kb on + strand, within BWI76_RS22480 at 4687.691 kb on + strand, within BWI76_RS22480 at 4687.691 kb on + strand, within BWI76_RS22480 at 4687.699 kb on - strand, within BWI76_RS22480 at 4687.699 kb on - strand, within BWI76_RS22480 at 4687.699 kb on - strand, within BWI76_RS22480 at 4687.700 kb on + strand, within BWI76_RS22480 at 4687.700 kb on + strand, within BWI76_RS22480 at 4687.700 kb on + strand, within BWI76_RS22480 at 4687.700 kb on + strand, within BWI76_RS22480 at 4687.700 kb on + strand, within BWI76_RS22480 at 4687.708 kb on - strand, within BWI76_RS22480 at 4687.708 kb on - strand, within BWI76_RS22480 at 4687.708 kb on - strand, within BWI76_RS22480 at 4687.710 kb on + strand, within BWI76_RS22480 at 4687.710 kb on + strand, within BWI76_RS22480 at 4687.710 kb on + strand, within BWI76_RS22480 at 4687.712 kb on + strand, within BWI76_RS22480 at 4687.720 kb on + strand at 4687.721 kb on + strand, within BWI76_RS22480 at 4687.729 kb on - strand, within BWI76_RS22480 at 4687.729 kb on - strand, within BWI76_RS22480 at 4687.729 kb on - strand, within BWI76_RS22480 at 4687.734 kb on + strand, within BWI76_RS22480 at 4687.734 kb on + strand, within BWI76_RS22480 at 4687.742 kb on - strand, within BWI76_RS22480 at 4687.742 kb on - strand, within BWI76_RS22480 at 4687.742 kb on - strand, within BWI76_RS22480 at 4687.759 kb on + strand, within BWI76_RS22480 at 4687.767 kb on - strand, within BWI76_RS22480 at 4687.767 kb on - strand, within BWI76_RS22480 at 4687.777 kb on - strand, within BWI76_RS22480 at 4687.777 kb on - strand, within BWI76_RS22480 at 4687.777 kb on - strand, within BWI76_RS22480 at 4687.777 kb on - strand, within BWI76_RS22480 at 4687.779 kb on + strand, within BWI76_RS22480 at 4687.816 kb on - strand, within BWI76_RS22480 at 4687.816 kb on - strand, within BWI76_RS22480 at 4687.818 kb on + strand, within BWI76_RS22480 at 4687.818 kb on + strand, within BWI76_RS22480 at 4687.826 kb on - strand, within BWI76_RS22480 at 4687.832 kb on - strand at 4687.832 kb on - strand at 4687.834 kb on - strand at 4687.842 kb on - strand at 4687.885 kb on - strand at 4687.888 kb on - strand at 4687.888 kb on - strand at 4687.890 kb on + strand at 4687.914 kb on - strand at 4687.928 kb on - strand at 4687.946 kb on - strand at 4687.947 kb on - strand at 4687.952 kb on + strand at 4687.952 kb on + strand at 4687.954 kb on - strand at 4687.966 kb on - strand at 4687.982 kb on + strand at 4687.992 kb on + strand at 4687.992 kb on + strand at 4687.997 kb on + strand at 4688.000 kb on - strand at 4688.000 kb on - strand at 4688.000 kb on - strand at 4688.000 kb on - strand at 4688.000 kb on - strand at 4688.001 kb on - strand at 4688.057 kb on - strand at 4688.087 kb on + strand at 4688.090 kb on + strand at 4688.092 kb on + strand at 4688.097 kb on + strand at 4688.105 kb on - strand at 4688.105 kb on - strand at 4688.105 kb on - strand at 4688.107 kb on + strand at 4688.110 kb on - strand at 4688.115 kb on - strand at 4688.159 kb on + strand at 4688.159 kb on + strand at 4688.187 kb on - strand at 4688.236 kb on + strand at 4688.288 kb on + strand at 4688.296 kb on - strand at 4688.296 kb on - strand at 4688.304 kb on - strand at 4688.355 kb on + strand at 4688.367 kb on + strand at 4688.370 kb on - strand at 4688.370 kb on - strand at 4688.375 kb on - strand at 4688.375 kb on - strand at 4688.375 kb on - strand at 4688.375 kb on - strand at 4688.375 kb on - strand at 4688.375 kb on - strand at 4688.375 kb on - strand at 4688.375 kb on - strand at 4688.375 kb on - strand at 4688.380 kb on - strand at 4688.381 kb on + strand at 4688.381 kb on + strand at 4688.381 kb on - strand at 4688.381 kb on - strand at 4688.389 kb on - strand at 4688.389 kb on - strand at 4688.389 kb on - strand at 4688.389 kb on - strand at 4688.389 kb on - strand at 4688.395 kb on - strand at 4688.425 kb on - strand at 4688.467 kb on + strand at 4688.467 kb on + strand at 4688.467 kb on + strand at 4688.470 kb on - strand at 4688.472 kb on + strand at 4688.472 kb on + strand at 4688.475 kb on - strand at 4688.475 kb on - strand at 4688.480 kb on - strand at 4688.480 kb on - strand at 4688.480 kb on - strand at 4688.480 kb on - strand at 4688.543 kb on - strand at 4688.547 kb on + strand at 4688.677 kb on + strand at 4688.677 kb on + strand at 4688.677 kb on + strand at 4688.677 kb on + strand at 4688.685 kb on - strand at 4688.685 kb on - strand at 4688.685 kb on - strand at 4688.685 kb on - strand at 4688.685 kb on - strand at 4688.685 kb on - strand at 4688.769 kb on + strand, within BWI76_RS22485 at 4688.856 kb on + strand, within BWI76_RS22485 at 4688.856 kb on + strand, within BWI76_RS22485 at 4688.862 kb on - strand, within BWI76_RS22485 at 4688.862 kb on - strand, within BWI76_RS22485 at 4688.893 kb on + strand, within BWI76_RS22485 at 4688.934 kb on + strand, within BWI76_RS22485 at 4688.934 kb on + strand, within BWI76_RS22485 at 4688.934 kb on + strand, within BWI76_RS22485 at 4688.934 kb on + strand, within BWI76_RS22485 at 4688.934 kb on + strand, within BWI76_RS22485 at 4688.942 kb on - strand, within BWI76_RS22485
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 4,685,798 + BWI76_RS22470 0.87 -0.7 4,686,110 - BWI76_RS22475 0.25 +0.6 4,686,228 + BWI76_RS22475 0.40 +0.5 4,686,468 + BWI76_RS22475 0.71 +2.3 4,686,530 + BWI76_RS22475 0.79 +0.7 4,686,576 + BWI76_RS22475 0.85 -0.8 4,686,638 + +0.0 4,686,654 + -0.1 4,686,682 + -0.7 4,686,685 - -0.9 4,686,690 - +0.3 4,687,067 - BWI76_RS22480 0.24 -0.7 4,687,102 + BWI76_RS22480 0.27 -0.7 4,687,102 + BWI76_RS22480 0.27 -0.8 4,687,148 + BWI76_RS22480 0.31 +0.5 4,687,175 - BWI76_RS22480 0.33 -0.2 4,687,214 + BWI76_RS22480 0.37 +0.3 4,687,318 - BWI76_RS22480 0.46 +0.3 4,687,350 + BWI76_RS22480 0.48 -1.0 4,687,478 - BWI76_RS22480 0.60 +0.4 4,687,583 - BWI76_RS22480 0.69 +0.0 4,687,631 + BWI76_RS22480 0.73 -0.4 4,687,631 + BWI76_RS22480 0.73 +0.0 4,687,639 - BWI76_RS22480 0.74 -0.1 4,687,639 - BWI76_RS22480 0.74 -1.0 4,687,641 + BWI76_RS22480 0.74 -0.7 4,687,644 - BWI76_RS22480 0.74 -0.5 4,687,654 - BWI76_RS22480 0.75 +0.2 4,687,691 + BWI76_RS22480 0.78 -0.0 4,687,691 + BWI76_RS22480 0.78 -0.6 4,687,691 + BWI76_RS22480 0.78 -0.5 4,687,699 - BWI76_RS22480 0.79 -0.5 4,687,699 - BWI76_RS22480 0.79 +0.0 4,687,699 - BWI76_RS22480 0.79 +1.0 4,687,700 + BWI76_RS22480 0.79 +1.4 4,687,700 + BWI76_RS22480 0.79 +0.9 4,687,700 + BWI76_RS22480 0.79 +1.0 4,687,700 + BWI76_RS22480 0.79 +0.1 4,687,700 + BWI76_RS22480 0.79 -0.7 4,687,708 - BWI76_RS22480 0.80 -0.7 4,687,708 - BWI76_RS22480 0.80 +0.0 4,687,708 - BWI76_RS22480 0.80 -1.7 4,687,710 + BWI76_RS22480 0.80 +1.6 4,687,710 + BWI76_RS22480 0.80 -0.1 4,687,710 + BWI76_RS22480 0.80 +0.3 4,687,712 + BWI76_RS22480 0.80 +0.2 4,687,720 + -1.0 4,687,721 + BWI76_RS22480 0.81 -0.3 4,687,729 - BWI76_RS22480 0.81 -0.3 4,687,729 - BWI76_RS22480 0.81 +0.6 4,687,729 - BWI76_RS22480 0.81 +1.5 4,687,734 + BWI76_RS22480 0.82 -1.4 4,687,734 + BWI76_RS22480 0.82 +0.4 4,687,742 - BWI76_RS22480 0.82 +0.6 4,687,742 - BWI76_RS22480 0.82 +0.5 4,687,742 - BWI76_RS22480 0.82 +0.9 4,687,759 + BWI76_RS22480 0.84 +0.2 4,687,767 - BWI76_RS22480 0.85 -0.1 4,687,767 - BWI76_RS22480 0.85 -0.1 4,687,777 - BWI76_RS22480 0.86 +0.7 4,687,777 - BWI76_RS22480 0.86 +0.5 4,687,777 - BWI76_RS22480 0.86 +0.2 4,687,777 - BWI76_RS22480 0.86 -0.6 4,687,779 + BWI76_RS22480 0.86 -0.5 4,687,816 - BWI76_RS22480 0.89 -0.1 4,687,816 - BWI76_RS22480 0.89 -0.4 4,687,818 + BWI76_RS22480 0.89 +0.6 4,687,818 + BWI76_RS22480 0.89 -0.2 4,687,826 - BWI76_RS22480 0.90 +0.0 4,687,832 - +0.3 4,687,832 - -0.1 4,687,834 - -1.7 4,687,842 - +0.3 4,687,885 - -1.6 4,687,888 - +0.6 4,687,888 - -1.1 4,687,890 + +0.4 4,687,914 - +0.0 4,687,928 - -0.5 4,687,946 - -0.7 4,687,947 - +0.4 4,687,952 + -1.4 4,687,952 + +2.5 4,687,954 - -0.6 4,687,966 - +1.4 4,687,982 + +0.0 4,687,992 + +0.3 4,687,992 + +0.4 4,687,997 + +0.5 4,688,000 - -0.2 4,688,000 - -0.1 4,688,000 - -0.1 4,688,000 - +0.1 4,688,000 - +0.5 4,688,001 - +1.0 4,688,057 - +1.6 4,688,087 + -0.7 4,688,090 + +0.9 4,688,092 + +0.0 4,688,097 + -2.1 4,688,105 - +2.0 4,688,105 - -0.1 4,688,105 - -1.0 4,688,107 + -0.4 4,688,110 - +0.6 4,688,115 - +0.6 4,688,159 + +0.1 4,688,159 + -0.7 4,688,187 - +0.5 4,688,236 + -0.4 4,688,288 + +2.0 4,688,296 - -0.4 4,688,296 - -0.1 4,688,304 - -0.3 4,688,355 + -0.5 4,688,367 + +1.6 4,688,370 - +0.0 4,688,370 - -1.0 4,688,375 - +0.1 4,688,375 - -0.5 4,688,375 - -0.2 4,688,375 - +0.3 4,688,375 - +0.1 4,688,375 - -1.1 4,688,375 - +0.4 4,688,375 - -1.0 4,688,375 - -0.6 4,688,380 - -0.5 4,688,381 + +0.2 4,688,381 + -1.3 4,688,381 - +0.5 4,688,381 - -2.8 4,688,389 - +0.0 4,688,389 - -0.0 4,688,389 - +0.3 4,688,389 - +0.2 4,688,389 - +0.3 4,688,395 - -1.5 4,688,425 - -0.1 4,688,467 + +0.5 4,688,467 + -1.4 4,688,467 + +0.2 4,688,470 - -0.7 4,688,472 + -0.8 4,688,472 + -0.2 4,688,475 - +0.5 4,688,475 - +2.0 4,688,480 - +0.7 4,688,480 - -2.0 4,688,480 - +0.3 4,688,480 - -0.1 4,688,543 - +0.2 4,688,547 + -1.1 4,688,677 + -0.3 4,688,677 + +0.4 4,688,677 + +0.1 4,688,677 + +0.1 4,688,685 - -1.3 4,688,685 - +1.2 4,688,685 - +0.2 4,688,685 - -0.4 4,688,685 - -1.2 4,688,685 - +1.2 4,688,769 + BWI76_RS22485 0.20 -1.4 4,688,856 + BWI76_RS22485 0.47 -1.8 4,688,856 + BWI76_RS22485 0.47 +1.3 4,688,862 - BWI76_RS22485 0.49 -0.4 4,688,862 - BWI76_RS22485 0.49 +0.5 4,688,893 + BWI76_RS22485 0.59 +1.0 4,688,934 + BWI76_RS22485 0.72 +0.0 4,688,934 + BWI76_RS22485 0.72 +0.0 4,688,934 + BWI76_RS22485 0.72 +0.3 4,688,934 + BWI76_RS22485 0.72 -1.8 4,688,934 + BWI76_RS22485 0.72 +1.9 4,688,942 - BWI76_RS22485 0.74 +0.0
Or see this region's nucleotide sequence