Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22480

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22470 and BWI76_RS22475 overlap by 8 nucleotidesBWI76_RS22475 and BWI76_RS22480 are separated by 96 nucleotidesBWI76_RS22480 and BWI76_RS22485 are separated by 760 nucleotides BWI76_RS22470: BWI76_RS22470 - transporter permease, at 4,684,928 to 4,685,923 _RS22470 BWI76_RS22475: BWI76_RS22475 - heme ABC transporter ATP-binding protein, at 4,685,916 to 4,686,695 _RS22475 BWI76_RS22480: BWI76_RS22480 - lactaldehyde reductase, at 4,686,792 to 4,687,943 _RS22480 BWI76_RS22485: BWI76_RS22485 - hypothetical protein, at 4,688,704 to 4,689,024 _RS22485 Position (kb) 4686 4687 4688Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4685.798 kb on + strand, within BWI76_RS22470at 4686.110 kb on - strand, within BWI76_RS22475at 4686.228 kb on + strand, within BWI76_RS22475at 4686.468 kb on + strand, within BWI76_RS22475at 4686.530 kb on + strand, within BWI76_RS22475at 4686.576 kb on + strand, within BWI76_RS22475at 4686.638 kb on + strandat 4686.654 kb on + strandat 4686.682 kb on + strandat 4686.685 kb on - strandat 4686.690 kb on - strandat 4687.067 kb on - strand, within BWI76_RS22480at 4687.102 kb on + strand, within BWI76_RS22480at 4687.102 kb on + strand, within BWI76_RS22480at 4687.148 kb on + strand, within BWI76_RS22480at 4687.175 kb on - strand, within BWI76_RS22480at 4687.214 kb on + strand, within BWI76_RS22480at 4687.318 kb on - strand, within BWI76_RS22480at 4687.350 kb on + strand, within BWI76_RS22480at 4687.478 kb on - strand, within BWI76_RS22480at 4687.583 kb on - strand, within BWI76_RS22480at 4687.631 kb on + strand, within BWI76_RS22480at 4687.631 kb on + strand, within BWI76_RS22480at 4687.639 kb on - strand, within BWI76_RS22480at 4687.639 kb on - strand, within BWI76_RS22480at 4687.641 kb on + strand, within BWI76_RS22480at 4687.644 kb on - strand, within BWI76_RS22480at 4687.654 kb on - strand, within BWI76_RS22480at 4687.691 kb on + strand, within BWI76_RS22480at 4687.691 kb on + strand, within BWI76_RS22480at 4687.691 kb on + strand, within BWI76_RS22480at 4687.699 kb on - strand, within BWI76_RS22480at 4687.699 kb on - strand, within BWI76_RS22480at 4687.699 kb on - strand, within BWI76_RS22480at 4687.700 kb on + strand, within BWI76_RS22480at 4687.700 kb on + strand, within BWI76_RS22480at 4687.700 kb on + strand, within BWI76_RS22480at 4687.700 kb on + strand, within BWI76_RS22480at 4687.700 kb on + strand, within BWI76_RS22480at 4687.708 kb on - strand, within BWI76_RS22480at 4687.708 kb on - strand, within BWI76_RS22480at 4687.708 kb on - strand, within BWI76_RS22480at 4687.710 kb on + strand, within BWI76_RS22480at 4687.710 kb on + strand, within BWI76_RS22480at 4687.710 kb on + strand, within BWI76_RS22480at 4687.712 kb on + strand, within BWI76_RS22480at 4687.720 kb on + strandat 4687.721 kb on + strand, within BWI76_RS22480at 4687.729 kb on - strand, within BWI76_RS22480at 4687.729 kb on - strand, within BWI76_RS22480at 4687.729 kb on - strand, within BWI76_RS22480at 4687.734 kb on + strand, within BWI76_RS22480at 4687.734 kb on + strand, within BWI76_RS22480at 4687.742 kb on - strand, within BWI76_RS22480at 4687.742 kb on - strand, within BWI76_RS22480at 4687.742 kb on - strand, within BWI76_RS22480at 4687.759 kb on + strand, within BWI76_RS22480at 4687.767 kb on - strand, within BWI76_RS22480at 4687.767 kb on - strand, within BWI76_RS22480at 4687.777 kb on - strand, within BWI76_RS22480at 4687.777 kb on - strand, within BWI76_RS22480at 4687.777 kb on - strand, within BWI76_RS22480at 4687.777 kb on - strand, within BWI76_RS22480at 4687.779 kb on + strand, within BWI76_RS22480at 4687.816 kb on - strand, within BWI76_RS22480at 4687.816 kb on - strand, within BWI76_RS22480at 4687.818 kb on + strand, within BWI76_RS22480at 4687.818 kb on + strand, within BWI76_RS22480at 4687.826 kb on - strand, within BWI76_RS22480at 4687.832 kb on - strandat 4687.832 kb on - strandat 4687.834 kb on - strandat 4687.842 kb on - strandat 4687.885 kb on - strandat 4687.888 kb on - strandat 4687.888 kb on - strandat 4687.890 kb on + strandat 4687.914 kb on - strandat 4687.928 kb on - strandat 4687.946 kb on - strandat 4687.947 kb on - strandat 4687.952 kb on + strandat 4687.952 kb on + strandat 4687.954 kb on - strandat 4687.966 kb on - strandat 4687.982 kb on + strandat 4687.992 kb on + strandat 4687.992 kb on + strandat 4687.997 kb on + strandat 4688.000 kb on - strandat 4688.000 kb on - strandat 4688.000 kb on - strandat 4688.000 kb on - strandat 4688.000 kb on - strandat 4688.001 kb on - strandat 4688.057 kb on - strandat 4688.087 kb on + strandat 4688.090 kb on + strandat 4688.092 kb on + strandat 4688.097 kb on + strandat 4688.105 kb on - strandat 4688.105 kb on - strandat 4688.105 kb on - strandat 4688.107 kb on + strandat 4688.110 kb on - strandat 4688.115 kb on - strandat 4688.159 kb on + strandat 4688.159 kb on + strandat 4688.187 kb on - strandat 4688.236 kb on + strandat 4688.288 kb on + strandat 4688.296 kb on - strandat 4688.296 kb on - strandat 4688.304 kb on - strandat 4688.355 kb on + strandat 4688.367 kb on + strandat 4688.370 kb on - strandat 4688.370 kb on - strandat 4688.375 kb on - strandat 4688.375 kb on - strandat 4688.375 kb on - strandat 4688.375 kb on - strandat 4688.375 kb on - strandat 4688.375 kb on - strandat 4688.375 kb on - strandat 4688.375 kb on - strandat 4688.375 kb on - strandat 4688.380 kb on - strandat 4688.381 kb on + strandat 4688.381 kb on + strandat 4688.381 kb on - strandat 4688.381 kb on - strandat 4688.389 kb on - strandat 4688.389 kb on - strandat 4688.389 kb on - strandat 4688.389 kb on - strandat 4688.389 kb on - strandat 4688.395 kb on - strandat 4688.425 kb on - strandat 4688.467 kb on + strandat 4688.467 kb on + strandat 4688.467 kb on + strandat 4688.470 kb on - strandat 4688.472 kb on + strandat 4688.472 kb on + strandat 4688.475 kb on - strandat 4688.475 kb on - strandat 4688.480 kb on - strandat 4688.480 kb on - strandat 4688.480 kb on - strandat 4688.480 kb on - strandat 4688.543 kb on - strandat 4688.547 kb on + strandat 4688.677 kb on + strandat 4688.677 kb on + strandat 4688.677 kb on + strandat 4688.677 kb on + strandat 4688.685 kb on - strandat 4688.685 kb on - strandat 4688.685 kb on - strandat 4688.685 kb on - strandat 4688.685 kb on - strandat 4688.685 kb on - strandat 4688.769 kb on + strand, within BWI76_RS22485at 4688.856 kb on + strand, within BWI76_RS22485at 4688.856 kb on + strand, within BWI76_RS22485at 4688.862 kb on - strand, within BWI76_RS22485at 4688.862 kb on - strand, within BWI76_RS22485at 4688.893 kb on + strand, within BWI76_RS22485at 4688.934 kb on + strand, within BWI76_RS22485at 4688.934 kb on + strand, within BWI76_RS22485at 4688.934 kb on + strand, within BWI76_RS22485at 4688.934 kb on + strand, within BWI76_RS22485at 4688.934 kb on + strand, within BWI76_RS22485at 4688.942 kb on - strand, within BWI76_RS22485

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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4,685,798 + BWI76_RS22470 0.87 -0.7
4,686,110 - BWI76_RS22475 0.25 +0.6
4,686,228 + BWI76_RS22475 0.40 +0.5
4,686,468 + BWI76_RS22475 0.71 +2.3
4,686,530 + BWI76_RS22475 0.79 +0.7
4,686,576 + BWI76_RS22475 0.85 -0.8
4,686,638 + +0.0
4,686,654 + -0.1
4,686,682 + -0.7
4,686,685 - -0.9
4,686,690 - +0.3
4,687,067 - BWI76_RS22480 0.24 -0.7
4,687,102 + BWI76_RS22480 0.27 -0.7
4,687,102 + BWI76_RS22480 0.27 -0.8
4,687,148 + BWI76_RS22480 0.31 +0.5
4,687,175 - BWI76_RS22480 0.33 -0.2
4,687,214 + BWI76_RS22480 0.37 +0.3
4,687,318 - BWI76_RS22480 0.46 +0.3
4,687,350 + BWI76_RS22480 0.48 -1.0
4,687,478 - BWI76_RS22480 0.60 +0.4
4,687,583 - BWI76_RS22480 0.69 +0.0
4,687,631 + BWI76_RS22480 0.73 -0.4
4,687,631 + BWI76_RS22480 0.73 +0.0
4,687,639 - BWI76_RS22480 0.74 -0.1
4,687,639 - BWI76_RS22480 0.74 -1.0
4,687,641 + BWI76_RS22480 0.74 -0.7
4,687,644 - BWI76_RS22480 0.74 -0.5
4,687,654 - BWI76_RS22480 0.75 +0.2
4,687,691 + BWI76_RS22480 0.78 -0.0
4,687,691 + BWI76_RS22480 0.78 -0.6
4,687,691 + BWI76_RS22480 0.78 -0.5
4,687,699 - BWI76_RS22480 0.79 -0.5
4,687,699 - BWI76_RS22480 0.79 +0.0
4,687,699 - BWI76_RS22480 0.79 +1.0
4,687,700 + BWI76_RS22480 0.79 +1.4
4,687,700 + BWI76_RS22480 0.79 +0.9
4,687,700 + BWI76_RS22480 0.79 +1.0
4,687,700 + BWI76_RS22480 0.79 +0.1
4,687,700 + BWI76_RS22480 0.79 -0.7
4,687,708 - BWI76_RS22480 0.80 -0.7
4,687,708 - BWI76_RS22480 0.80 +0.0
4,687,708 - BWI76_RS22480 0.80 -1.7
4,687,710 + BWI76_RS22480 0.80 +1.6
4,687,710 + BWI76_RS22480 0.80 -0.1
4,687,710 + BWI76_RS22480 0.80 +0.3
4,687,712 + BWI76_RS22480 0.80 +0.2
4,687,720 + -1.0
4,687,721 + BWI76_RS22480 0.81 -0.3
4,687,729 - BWI76_RS22480 0.81 -0.3
4,687,729 - BWI76_RS22480 0.81 +0.6
4,687,729 - BWI76_RS22480 0.81 +1.5
4,687,734 + BWI76_RS22480 0.82 -1.4
4,687,734 + BWI76_RS22480 0.82 +0.4
4,687,742 - BWI76_RS22480 0.82 +0.6
4,687,742 - BWI76_RS22480 0.82 +0.5
4,687,742 - BWI76_RS22480 0.82 +0.9
4,687,759 + BWI76_RS22480 0.84 +0.2
4,687,767 - BWI76_RS22480 0.85 -0.1
4,687,767 - BWI76_RS22480 0.85 -0.1
4,687,777 - BWI76_RS22480 0.86 +0.7
4,687,777 - BWI76_RS22480 0.86 +0.5
4,687,777 - BWI76_RS22480 0.86 +0.2
4,687,777 - BWI76_RS22480 0.86 -0.6
4,687,779 + BWI76_RS22480 0.86 -0.5
4,687,816 - BWI76_RS22480 0.89 -0.1
4,687,816 - BWI76_RS22480 0.89 -0.4
4,687,818 + BWI76_RS22480 0.89 +0.6
4,687,818 + BWI76_RS22480 0.89 -0.2
4,687,826 - BWI76_RS22480 0.90 +0.0
4,687,832 - +0.3
4,687,832 - -0.1
4,687,834 - -1.7
4,687,842 - +0.3
4,687,885 - -1.6
4,687,888 - +0.6
4,687,888 - -1.1
4,687,890 + +0.4
4,687,914 - +0.0
4,687,928 - -0.5
4,687,946 - -0.7
4,687,947 - +0.4
4,687,952 + -1.4
4,687,952 + +2.5
4,687,954 - -0.6
4,687,966 - +1.4
4,687,982 + +0.0
4,687,992 + +0.3
4,687,992 + +0.4
4,687,997 + +0.5
4,688,000 - -0.2
4,688,000 - -0.1
4,688,000 - -0.1
4,688,000 - +0.1
4,688,000 - +0.5
4,688,001 - +1.0
4,688,057 - +1.6
4,688,087 + -0.7
4,688,090 + +0.9
4,688,092 + +0.0
4,688,097 + -2.1
4,688,105 - +2.0
4,688,105 - -0.1
4,688,105 - -1.0
4,688,107 + -0.4
4,688,110 - +0.6
4,688,115 - +0.6
4,688,159 + +0.1
4,688,159 + -0.7
4,688,187 - +0.5
4,688,236 + -0.4
4,688,288 + +2.0
4,688,296 - -0.4
4,688,296 - -0.1
4,688,304 - -0.3
4,688,355 + -0.5
4,688,367 + +1.6
4,688,370 - +0.0
4,688,370 - -1.0
4,688,375 - +0.1
4,688,375 - -0.5
4,688,375 - -0.2
4,688,375 - +0.3
4,688,375 - +0.1
4,688,375 - -1.1
4,688,375 - +0.4
4,688,375 - -1.0
4,688,375 - -0.6
4,688,380 - -0.5
4,688,381 + +0.2
4,688,381 + -1.3
4,688,381 - +0.5
4,688,381 - -2.8
4,688,389 - +0.0
4,688,389 - -0.0
4,688,389 - +0.3
4,688,389 - +0.2
4,688,389 - +0.3
4,688,395 - -1.5
4,688,425 - -0.1
4,688,467 + +0.5
4,688,467 + -1.4
4,688,467 + +0.2
4,688,470 - -0.7
4,688,472 + -0.8
4,688,472 + -0.2
4,688,475 - +0.5
4,688,475 - +2.0
4,688,480 - +0.7
4,688,480 - -2.0
4,688,480 - +0.3
4,688,480 - -0.1
4,688,543 - +0.2
4,688,547 + -1.1
4,688,677 + -0.3
4,688,677 + +0.4
4,688,677 + +0.1
4,688,677 + +0.1
4,688,685 - -1.3
4,688,685 - +1.2
4,688,685 - +0.2
4,688,685 - -0.4
4,688,685 - -1.2
4,688,685 - +1.2
4,688,769 + BWI76_RS22485 0.20 -1.4
4,688,856 + BWI76_RS22485 0.47 -1.8
4,688,856 + BWI76_RS22485 0.47 +1.3
4,688,862 - BWI76_RS22485 0.49 -0.4
4,688,862 - BWI76_RS22485 0.49 +0.5
4,688,893 + BWI76_RS22485 0.59 +1.0
4,688,934 + BWI76_RS22485 0.72 +0.0
4,688,934 + BWI76_RS22485 0.72 +0.0
4,688,934 + BWI76_RS22485 0.72 +0.3
4,688,934 + BWI76_RS22485 0.72 -1.8
4,688,934 + BWI76_RS22485 0.72 +1.9
4,688,942 - BWI76_RS22485 0.74 +0.0

Or see this region's nucleotide sequence