Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20480 and BWI76_RS20485 are separated by 73 nucleotides BWI76_RS20485 and BWI76_RS20490 are separated by 485 nucleotides
BWI76_RS20480: BWI76_RS20480 - formate/nitrite transporter, at 4,287,534 to 4,288,430
_RS20480
BWI76_RS20485: BWI76_RS20485 - tRNA-Arg, at 4,288,504 to 4,288,575
_RS20485
BWI76_RS20490: BWI76_RS20490 - hypothetical protein, at 4,289,061 to 4,289,834
_RS20490
Position (kb)
4289
4290 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4288.213 kb on - strand, within BWI76_RS20480 at 4288.216 kb on + strand, within BWI76_RS20480 at 4288.254 kb on + strand, within BWI76_RS20480 at 4288.289 kb on - strand, within BWI76_RS20480 at 4288.292 kb on + strand, within BWI76_RS20480 at 4288.312 kb on - strand, within BWI76_RS20480 at 4288.312 kb on - strand, within BWI76_RS20480 at 4288.322 kb on + strand, within BWI76_RS20480 at 4288.365 kb on - strand at 4288.377 kb on + strand at 4288.377 kb on + strand at 4288.447 kb on + strand at 4288.462 kb on + strand at 4288.462 kb on + strand at 4288.462 kb on + strand at 4288.463 kb on + strand at 4288.470 kb on - strand at 4288.470 kb on - strand at 4288.471 kb on - strand at 4288.578 kb on - strand at 4288.609 kb on + strand at 4288.611 kb on + strand at 4288.650 kb on + strand at 4288.650 kb on + strand at 4288.658 kb on - strand at 4288.658 kb on - strand at 4288.663 kb on - strand at 4288.701 kb on + strand at 4288.701 kb on + strand at 4288.709 kb on - strand at 4288.710 kb on + strand at 4288.710 kb on + strand at 4288.710 kb on - strand at 4288.728 kb on - strand at 4288.728 kb on - strand at 4288.811 kb on - strand at 4289.174 kb on - strand, within BWI76_RS20490 at 4289.187 kb on - strand at 4289.187 kb on - strand, within BWI76_RS20490 at 4289.219 kb on - strand, within BWI76_RS20490 at 4289.298 kb on - strand, within BWI76_RS20490 at 4289.504 kb on - strand, within BWI76_RS20490 at 4289.649 kb on + strand, within BWI76_RS20490 at 4289.657 kb on - strand, within BWI76_RS20490 at 4289.657 kb on - strand, within BWI76_RS20490 at 4289.880 kb on - strand at 4289.971 kb on - strand at 4289.971 kb on - strand at 4290.008 kb on + strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.046 kb on + strand at 4290.046 kb on + strand at 4290.091 kb on + strand at 4290.096 kb on + strand at 4290.096 kb on + strand at 4290.101 kb on + strand at 4290.101 kb on + strand at 4290.102 kb on + strand at 4290.135 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.155 kb on + strand at 4290.155 kb on + strand at 4290.163 kb on - strand at 4290.164 kb on - strand at 4290.164 kb on - strand at 4290.166 kb on + strand at 4290.169 kb on - strand at 4290.188 kb on - strand at 4290.194 kb on + strand at 4290.288 kb on + strand at 4290.288 kb on + strand at 4290.289 kb on + strand at 4290.289 kb on + strand at 4290.289 kb on + strand at 4290.291 kb on + strand at 4290.291 kb on + strand at 4290.291 kb on + strand at 4290.291 kb on + strand at 4290.297 kb on - strand at 4290.299 kb on - strand at 4290.299 kb on - strand at 4290.306 kb on + strand at 4290.315 kb on + strand at 4290.322 kb on + strand at 4290.322 kb on - strand at 4290.323 kb on - strand at 4290.334 kb on + strand at 4290.369 kb on + strand at 4290.369 kb on + strand at 4290.377 kb on - strand at 4290.377 kb on - strand at 4290.377 kb on - strand at 4290.377 kb on - strand at 4290.386 kb on - strand at 4290.408 kb on + strand at 4290.446 kb on - strand at 4290.446 kb on - strand at 4290.448 kb on - strand at 4290.513 kb on - strand at 4290.698 kb on + strand at 4290.711 kb on - strand at 4290.721 kb on - strand at 4290.729 kb on + strand at 4290.743 kb on + strand at 4290.751 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 4,288,213 - BWI76_RS20480 0.76 +0.2 4,288,216 + BWI76_RS20480 0.76 -0.1 4,288,254 + BWI76_RS20480 0.80 +0.0 4,288,289 - BWI76_RS20480 0.84 -0.1 4,288,292 + BWI76_RS20480 0.85 +0.5 4,288,312 - BWI76_RS20480 0.87 -0.6 4,288,312 - BWI76_RS20480 0.87 +0.4 4,288,322 + BWI76_RS20480 0.88 -0.5 4,288,365 - +0.1 4,288,377 + -0.1 4,288,377 + +0.2 4,288,447 + -0.6 4,288,462 + -0.3 4,288,462 + +0.3 4,288,462 + +0.0 4,288,463 + +0.8 4,288,470 - +1.0 4,288,470 - -0.5 4,288,471 - -0.7 4,288,578 - -0.7 4,288,609 + -1.0 4,288,611 + +0.8 4,288,650 + -0.4 4,288,650 + +0.7 4,288,658 - -0.4 4,288,658 - +1.0 4,288,663 - +0.4 4,288,701 + -0.2 4,288,701 + +0.8 4,288,709 - -0.9 4,288,710 + +1.1 4,288,710 + -0.6 4,288,710 - -0.3 4,288,728 - -0.6 4,288,728 - +0.5 4,288,811 - +0.0 4,289,174 - BWI76_RS20490 0.15 -2.0 4,289,187 - +0.4 4,289,187 - BWI76_RS20490 0.16 -1.3 4,289,219 - BWI76_RS20490 0.20 +0.0 4,289,298 - BWI76_RS20490 0.31 -1.1 4,289,504 - BWI76_RS20490 0.57 -2.0 4,289,649 + BWI76_RS20490 0.76 -0.4 4,289,657 - BWI76_RS20490 0.77 +0.2 4,289,657 - BWI76_RS20490 0.77 -0.9 4,289,880 - +0.7 4,289,971 - -0.4 4,289,971 - -0.6 4,290,008 + +0.2 4,290,016 - +2.2 4,290,016 - -0.5 4,290,016 - +0.6 4,290,016 - -0.2 4,290,016 - +1.0 4,290,016 - -1.0 4,290,016 - -1.6 4,290,016 - -0.2 4,290,016 - -0.8 4,290,016 - +0.3 4,290,046 + +1.6 4,290,046 + +1.6 4,290,091 + +0.3 4,290,096 + +0.8 4,290,096 + -1.0 4,290,101 + -0.4 4,290,101 + +0.6 4,290,102 + -0.2 4,290,135 + -0.2 4,290,145 + +0.3 4,290,145 + +0.3 4,290,145 + +0.6 4,290,145 + -0.4 4,290,145 + -0.8 4,290,145 + -0.2 4,290,145 + +0.2 4,290,145 + -0.1 4,290,145 + -0.0 4,290,145 + -0.4 4,290,145 + -0.3 4,290,145 + +0.1 4,290,145 + -0.7 4,290,153 - -0.2 4,290,153 - -0.1 4,290,153 - -0.1 4,290,153 - -0.6 4,290,153 - -1.8 4,290,153 - +1.0 4,290,153 - +1.6 4,290,153 - +0.0 4,290,155 + -0.1 4,290,155 + -0.2 4,290,163 - +0.1 4,290,164 - +0.5 4,290,164 - -0.5 4,290,166 + +0.4 4,290,169 - +0.8 4,290,188 - -0.2 4,290,194 + -0.1 4,290,288 + +0.4 4,290,288 + +0.0 4,290,289 + -0.4 4,290,289 + -0.1 4,290,289 + -2.0 4,290,291 + +0.1 4,290,291 + -1.8 4,290,291 + +0.6 4,290,291 + -0.0 4,290,297 - -1.0 4,290,299 - -0.4 4,290,299 - +0.2 4,290,306 + +0.4 4,290,315 + +0.7 4,290,322 + +0.4 4,290,322 - -1.4 4,290,323 - -0.1 4,290,334 + -0.2 4,290,369 + -0.0 4,290,369 + +0.0 4,290,377 - +0.3 4,290,377 - +0.1 4,290,377 - +0.9 4,290,377 - -0.2 4,290,386 - +0.7 4,290,408 + +0.2 4,290,446 - +1.0 4,290,446 - -0.0 4,290,448 - -0.5 4,290,513 - +0.2 4,290,698 + +0.6 4,290,711 - -0.5 4,290,721 - -1.6 4,290,729 + -0.8 4,290,743 + +0.1 4,290,751 - -0.1
Or see this region's nucleotide sequence