Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16810 and BWI76_RS16815 overlap by 4 nucleotides BWI76_RS16815 and BWI76_RS16820 are separated by 16 nucleotides BWI76_RS16820 and BWI76_RS16825 overlap by 4 nucleotides
BWI76_RS16810: BWI76_RS16810 - RpiR family transcriptional regulator, at 3,485,048 to 3,485,947
_RS16810
BWI76_RS16815: BWI76_RS16815 - periplasmic binding protein, at 3,485,944 to 3,486,891
_RS16815
BWI76_RS16820: BWI76_RS16820 - iron ABC transporter, at 3,486,908 to 3,487,960
_RS16820
BWI76_RS16825: BWI76_RS16825 - heme ABC transporter, at 3,487,957 to 3,488,982
_RS16825
Position (kb) 3486
3487
3488 Strain fitness (log2 ratio) -1
0
1 at 3486.017 kb on + strand at 3486.017 kb on + strand at 3486.032 kb on - strand at 3486.033 kb on - strand at 3486.588 kb on - strand, within BWI76_RS16815 at 3486.654 kb on + strand, within BWI76_RS16815 at 3487.049 kb on + strand, within BWI76_RS16820 at 3487.075 kb on + strand, within BWI76_RS16820 at 3487.353 kb on - strand, within BWI76_RS16820 at 3487.378 kb on + strand, within BWI76_RS16820 at 3487.656 kb on - strand, within BWI76_RS16820 at 3487.656 kb on - strand, within BWI76_RS16820 at 3487.738 kb on + strand, within BWI76_RS16820 at 3488.148 kb on + strand, within BWI76_RS16825 at 3488.253 kb on - strand, within BWI76_RS16825 at 3488.499 kb on + strand, within BWI76_RS16825 at 3488.599 kb on + strand, within BWI76_RS16825 at 3488.607 kb on - strand, within BWI76_RS16825 at 3488.667 kb on + strand, within BWI76_RS16825
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 3,486,017 + +0.3 3,486,017 + +0.4 3,486,032 - -0.4 3,486,033 - -0.5 3,486,588 - BWI76_RS16815 0.68 +1.0 3,486,654 + BWI76_RS16815 0.75 -1.3 3,487,049 + BWI76_RS16820 0.13 +0.0 3,487,075 + BWI76_RS16820 0.16 +1.2 3,487,353 - BWI76_RS16820 0.42 +0.6 3,487,378 + BWI76_RS16820 0.45 -0.0 3,487,656 - BWI76_RS16820 0.71 +0.6 3,487,656 - BWI76_RS16820 0.71 +0.5 3,487,738 + BWI76_RS16820 0.79 +0.2 3,488,148 + BWI76_RS16825 0.19 +0.2 3,488,253 - BWI76_RS16825 0.29 -1.0 3,488,499 + BWI76_RS16825 0.53 +0.7 3,488,599 + BWI76_RS16825 0.63 +1.1 3,488,607 - BWI76_RS16825 0.63 +0.3 3,488,667 + BWI76_RS16825 0.69 -0.5
Or see this region's nucleotide sequence