Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14430 and BWI76_RS14435 are separated by 19 nucleotides BWI76_RS14435 and BWI76_RS14440 are separated by 2 nucleotides BWI76_RS14440 and BWI76_RS14445 are separated by 52 nucleotides
BWI76_RS14430: BWI76_RS14430 - peptidase C45, at 3,012,027 to 3,013,049
_RS14430
BWI76_RS14435: BWI76_RS14435 - glutamine ABC transporter ATP-binding protein, at 3,013,069 to 3,013,791
_RS14435
BWI76_RS14440: BWI76_RS14440 - glutamine ABC transporter permease GlnP, at 3,013,794 to 3,014,450
_RS14440
BWI76_RS14445: BWI76_RS14445 - amino acid ABC transporter substrate-binding protein, at 3,014,503 to 3,015,255
_RS14445
Position (kb)
3013
3014 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3012.116 kb on - strand at 3012.239 kb on - strand, within BWI76_RS14430 at 3012.280 kb on - strand, within BWI76_RS14430 at 3012.362 kb on + strand, within BWI76_RS14430 at 3012.372 kb on + strand, within BWI76_RS14430 at 3012.380 kb on - strand, within BWI76_RS14430 at 3012.386 kb on + strand, within BWI76_RS14430 at 3012.420 kb on + strand, within BWI76_RS14430 at 3012.659 kb on + strand, within BWI76_RS14430 at 3013.010 kb on - strand at 3013.134 kb on - strand at 3013.181 kb on - strand, within BWI76_RS14435 at 3013.705 kb on - strand, within BWI76_RS14435 at 3013.746 kb on - strand at 3013.847 kb on + strand at 3013.849 kb on - strand at 3013.879 kb on + strand, within BWI76_RS14440 at 3013.879 kb on + strand, within BWI76_RS14440 at 3013.882 kb on - strand, within BWI76_RS14440 at 3013.882 kb on - strand, within BWI76_RS14440 at 3013.887 kb on - strand, within BWI76_RS14440 at 3013.887 kb on - strand, within BWI76_RS14440 at 3013.887 kb on - strand, within BWI76_RS14440 at 3013.887 kb on - strand, within BWI76_RS14440 at 3013.894 kb on - strand, within BWI76_RS14440 at 3013.962 kb on - strand, within BWI76_RS14440 at 3013.967 kb on - strand, within BWI76_RS14440 at 3013.981 kb on - strand, within BWI76_RS14440 at 3014.019 kb on + strand, within BWI76_RS14440 at 3014.019 kb on + strand, within BWI76_RS14440 at 3014.019 kb on + strand, within BWI76_RS14440 at 3014.041 kb on - strand, within BWI76_RS14440 at 3014.046 kb on + strand, within BWI76_RS14440 at 3014.054 kb on - strand, within BWI76_RS14440 at 3014.054 kb on - strand, within BWI76_RS14440 at 3014.054 kb on - strand, within BWI76_RS14440 at 3014.054 kb on - strand, within BWI76_RS14440 at 3014.054 kb on - strand, within BWI76_RS14440 at 3014.059 kb on - strand, within BWI76_RS14440 at 3014.059 kb on - strand, within BWI76_RS14440 at 3014.059 kb on - strand, within BWI76_RS14440 at 3014.059 kb on - strand, within BWI76_RS14440 at 3014.059 kb on - strand, within BWI76_RS14440 at 3014.059 kb on - strand, within BWI76_RS14440 at 3014.059 kb on - strand, within BWI76_RS14440 at 3014.071 kb on - strand, within BWI76_RS14440 at 3014.071 kb on - strand, within BWI76_RS14440 at 3014.071 kb on - strand, within BWI76_RS14440 at 3014.071 kb on - strand, within BWI76_RS14440 at 3014.179 kb on + strand, within BWI76_RS14440 at 3014.187 kb on - strand, within BWI76_RS14440 at 3014.191 kb on - strand, within BWI76_RS14440 at 3014.201 kb on - strand at 3014.201 kb on - strand, within BWI76_RS14440 at 3014.201 kb on - strand, within BWI76_RS14440 at 3014.201 kb on - strand, within BWI76_RS14440 at 3014.201 kb on - strand, within BWI76_RS14440 at 3014.211 kb on - strand, within BWI76_RS14440 at 3014.211 kb on - strand, within BWI76_RS14440 at 3014.323 kb on - strand, within BWI76_RS14440 at 3014.377 kb on - strand, within BWI76_RS14440 at 3014.457 kb on + strand at 3014.459 kb on + strand at 3014.465 kb on - strand at 3014.465 kb on - strand at 3014.467 kb on - strand at 3014.467 kb on - strand at 3014.467 kb on - strand at 3014.471 kb on + strand at 3014.479 kb on - strand at 3014.481 kb on + strand at 3014.484 kb on - strand at 3014.484 kb on - strand at 3014.508 kb on - strand at 3014.508 kb on - strand at 3014.556 kb on - strand at 3014.556 kb on - strand at 3014.556 kb on - strand at 3014.556 kb on - strand at 3014.556 kb on - strand at 3014.556 kb on - strand at 3014.559 kb on + strand at 3014.559 kb on + strand at 3014.577 kb on - strand at 3014.577 kb on - strand at 3014.579 kb on + strand, within BWI76_RS14445 at 3014.587 kb on - strand at 3014.600 kb on - strand, within BWI76_RS14445 at 3014.600 kb on - strand, within BWI76_RS14445 at 3014.614 kb on - strand at 3014.637 kb on + strand, within BWI76_RS14445 at 3014.637 kb on + strand, within BWI76_RS14445 at 3014.637 kb on + strand, within BWI76_RS14445 at 3014.645 kb on - strand, within BWI76_RS14445 at 3014.649 kb on + strand, within BWI76_RS14445 at 3014.657 kb on - strand, within BWI76_RS14445 at 3014.663 kb on + strand, within BWI76_RS14445 at 3014.698 kb on + strand, within BWI76_RS14445 at 3014.706 kb on + strand, within BWI76_RS14445 at 3014.706 kb on + strand, within BWI76_RS14445 at 3014.706 kb on + strand, within BWI76_RS14445 at 3014.706 kb on + strand, within BWI76_RS14445 at 3014.714 kb on - strand, within BWI76_RS14445 at 3014.714 kb on - strand, within BWI76_RS14445 at 3014.716 kb on + strand, within BWI76_RS14445 at 3014.716 kb on + strand, within BWI76_RS14445 at 3014.719 kb on + strand, within BWI76_RS14445 at 3014.727 kb on - strand, within BWI76_RS14445 at 3014.729 kb on + strand at 3014.729 kb on + strand, within BWI76_RS14445 at 3014.729 kb on + strand, within BWI76_RS14445 at 3014.730 kb on + strand, within BWI76_RS14445 at 3014.730 kb on + strand, within BWI76_RS14445 at 3014.730 kb on + strand, within BWI76_RS14445 at 3014.730 kb on + strand, within BWI76_RS14445 at 3014.737 kb on - strand, within BWI76_RS14445 at 3014.737 kb on - strand, within BWI76_RS14445 at 3014.738 kb on - strand, within BWI76_RS14445 at 3014.759 kb on - strand, within BWI76_RS14445 at 3014.759 kb on - strand, within BWI76_RS14445 at 3014.759 kb on - strand, within BWI76_RS14445 at 3014.759 kb on - strand, within BWI76_RS14445 at 3014.759 kb on - strand, within BWI76_RS14445 at 3014.759 kb on - strand, within BWI76_RS14445
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 3,012,116 - +1.1 3,012,239 - BWI76_RS14430 0.21 -2.0 3,012,280 - BWI76_RS14430 0.25 -0.7 3,012,362 + BWI76_RS14430 0.33 +2.1 3,012,372 + BWI76_RS14430 0.34 +0.4 3,012,380 - BWI76_RS14430 0.35 -0.1 3,012,386 + BWI76_RS14430 0.35 -0.7 3,012,420 + BWI76_RS14430 0.38 +0.1 3,012,659 + BWI76_RS14430 0.62 -0.6 3,013,010 - -0.3 3,013,134 - +1.1 3,013,181 - BWI76_RS14435 0.15 -0.6 3,013,705 - BWI76_RS14435 0.88 -2.3 3,013,746 - -0.2 3,013,847 + -0.6 3,013,849 - +0.5 3,013,879 + BWI76_RS14440 0.13 -0.3 3,013,879 + BWI76_RS14440 0.13 +0.2 3,013,882 - BWI76_RS14440 0.13 -0.3 3,013,882 - BWI76_RS14440 0.13 -0.2 3,013,887 - BWI76_RS14440 0.14 -0.4 3,013,887 - BWI76_RS14440 0.14 +0.2 3,013,887 - BWI76_RS14440 0.14 +0.0 3,013,887 - BWI76_RS14440 0.14 -0.3 3,013,894 - BWI76_RS14440 0.15 +0.0 3,013,962 - BWI76_RS14440 0.26 +1.3 3,013,967 - BWI76_RS14440 0.26 -0.4 3,013,981 - BWI76_RS14440 0.28 +0.1 3,014,019 + BWI76_RS14440 0.34 -0.3 3,014,019 + BWI76_RS14440 0.34 -0.2 3,014,019 + BWI76_RS14440 0.34 -0.9 3,014,041 - BWI76_RS14440 0.38 +0.1 3,014,046 + BWI76_RS14440 0.38 -1.1 3,014,054 - BWI76_RS14440 0.40 +0.1 3,014,054 - BWI76_RS14440 0.40 -0.2 3,014,054 - BWI76_RS14440 0.40 -2.2 3,014,054 - BWI76_RS14440 0.40 +0.6 3,014,054 - BWI76_RS14440 0.40 -0.1 3,014,059 - BWI76_RS14440 0.40 +0.1 3,014,059 - BWI76_RS14440 0.40 -0.3 3,014,059 - BWI76_RS14440 0.40 +0.7 3,014,059 - BWI76_RS14440 0.40 -0.0 3,014,059 - BWI76_RS14440 0.40 -0.3 3,014,059 - BWI76_RS14440 0.40 -0.0 3,014,059 - BWI76_RS14440 0.40 +0.0 3,014,071 - BWI76_RS14440 0.42 -0.4 3,014,071 - BWI76_RS14440 0.42 -0.9 3,014,071 - BWI76_RS14440 0.42 -0.5 3,014,071 - BWI76_RS14440 0.42 +0.1 3,014,179 + BWI76_RS14440 0.59 -1.2 3,014,187 - BWI76_RS14440 0.60 +1.2 3,014,191 - BWI76_RS14440 0.60 -0.8 3,014,201 - +0.8 3,014,201 - BWI76_RS14440 0.62 -0.5 3,014,201 - BWI76_RS14440 0.62 +0.4 3,014,201 - BWI76_RS14440 0.62 -0.9 3,014,201 - BWI76_RS14440 0.62 -3.1 3,014,211 - BWI76_RS14440 0.63 +0.8 3,014,211 - BWI76_RS14440 0.63 -1.2 3,014,323 - BWI76_RS14440 0.81 -0.2 3,014,377 - BWI76_RS14440 0.89 -0.2 3,014,457 + -0.5 3,014,459 + +1.1 3,014,465 - +0.2 3,014,465 - +0.3 3,014,467 - -1.8 3,014,467 - -0.6 3,014,467 - -0.1 3,014,471 + -1.7 3,014,479 - -1.0 3,014,481 + -0.8 3,014,484 - -0.8 3,014,484 - +0.6 3,014,508 - +0.5 3,014,508 - +0.2 3,014,556 - -0.6 3,014,556 - -0.2 3,014,556 - -1.0 3,014,556 - +0.3 3,014,556 - +0.6 3,014,556 - -0.6 3,014,559 + +0.5 3,014,559 + -0.4 3,014,577 - -0.8 3,014,577 - +0.1 3,014,579 + BWI76_RS14445 0.10 -0.9 3,014,587 - +0.8 3,014,600 - BWI76_RS14445 0.13 +0.8 3,014,600 - BWI76_RS14445 0.13 -0.4 3,014,614 - +0.8 3,014,637 + BWI76_RS14445 0.18 +1.4 3,014,637 + BWI76_RS14445 0.18 -0.8 3,014,637 + BWI76_RS14445 0.18 +1.0 3,014,645 - BWI76_RS14445 0.19 +0.1 3,014,649 + BWI76_RS14445 0.19 -1.5 3,014,657 - BWI76_RS14445 0.20 -0.2 3,014,663 + BWI76_RS14445 0.21 +0.2 3,014,698 + BWI76_RS14445 0.26 -0.2 3,014,706 + BWI76_RS14445 0.27 -1.8 3,014,706 + BWI76_RS14445 0.27 -3.3 3,014,706 + BWI76_RS14445 0.27 -0.3 3,014,706 + BWI76_RS14445 0.27 -0.9 3,014,714 - BWI76_RS14445 0.28 -0.4 3,014,714 - BWI76_RS14445 0.28 +0.1 3,014,716 + BWI76_RS14445 0.28 +0.4 3,014,716 + BWI76_RS14445 0.28 -0.3 3,014,719 + BWI76_RS14445 0.29 +1.7 3,014,727 - BWI76_RS14445 0.30 -0.6 3,014,729 + +0.8 3,014,729 + BWI76_RS14445 0.30 +0.1 3,014,729 + BWI76_RS14445 0.30 +0.1 3,014,730 + BWI76_RS14445 0.30 -0.2 3,014,730 + BWI76_RS14445 0.30 +0.2 3,014,730 + BWI76_RS14445 0.30 -0.8 3,014,730 + BWI76_RS14445 0.30 -1.0 3,014,737 - BWI76_RS14445 0.31 +1.8 3,014,737 - BWI76_RS14445 0.31 +1.3 3,014,738 - BWI76_RS14445 0.31 -1.2 3,014,759 - BWI76_RS14445 0.34 +0.5 3,014,759 - BWI76_RS14445 0.34 +0.1 3,014,759 - BWI76_RS14445 0.34 +0.0 3,014,759 - BWI76_RS14445 0.34 -0.5 3,014,759 - BWI76_RS14445 0.34 +0.3 3,014,759 - BWI76_RS14445 0.34 -0.2
Or see this region's nucleotide sequence