Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11645 and BWI76_RS11650 are separated by 9 nucleotides BWI76_RS11650 and BWI76_RS11655 overlap by 4 nucleotides BWI76_RS11655 and BWI76_RS11660 overlap by 11 nucleotides BWI76_RS11660 and BWI76_RS11665 are separated by 191 nucleotides
BWI76_RS11645: BWI76_RS11645 - ABC transporter substrate-binding protein, at 2,450,359 to 2,451,519
_RS11645
BWI76_RS11650: BWI76_RS11650 - carboxymuconolactone decarboxylase family protein, at 2,451,529 to 2,452,080
_RS11650
BWI76_RS11655: BWI76_RS11655 - TVP38/TMEM64 family protein, at 2,452,077 to 2,452,775
_RS11655
BWI76_RS11660: BWI76_RS11660 - TVP38/TMEM64 family protein, at 2,452,765 to 2,453,418
_RS11660
BWI76_RS11665: BWI76_RS11665 - exodeoxyribonuclease III, at 2,453,610 to 2,454,416
_RS11665
Position (kb)
2452
2453 Strain fitness (log2 ratio)
-2
-1
0
1 at 2452.180 kb on - strand, within BWI76_RS11655 at 2452.253 kb on + strand, within BWI76_RS11655 at 2452.253 kb on + strand, within BWI76_RS11655 at 2452.303 kb on + strand, within BWI76_RS11655 at 2452.454 kb on + strand, within BWI76_RS11655 at 2452.477 kb on + strand, within BWI76_RS11655 at 2452.676 kb on + strand, within BWI76_RS11655 at 2452.684 kb on - strand, within BWI76_RS11655 at 2452.685 kb on + strand, within BWI76_RS11655 at 2452.832 kb on + strand, within BWI76_RS11660 at 2452.840 kb on - strand, within BWI76_RS11660 at 2452.847 kb on + strand, within BWI76_RS11660 at 2452.847 kb on + strand, within BWI76_RS11660 at 2452.852 kb on + strand, within BWI76_RS11660 at 2452.885 kb on - strand, within BWI76_RS11660 at 2452.953 kb on - strand, within BWI76_RS11660 at 2452.953 kb on - strand, within BWI76_RS11660 at 2453.031 kb on - strand, within BWI76_RS11660 at 2453.045 kb on + strand, within BWI76_RS11660 at 2453.137 kb on - strand, within BWI76_RS11660 at 2453.139 kb on + strand, within BWI76_RS11660 at 2453.147 kb on - strand, within BWI76_RS11660 at 2453.151 kb on + strand, within BWI76_RS11660 at 2453.288 kb on + strand, within BWI76_RS11660 at 2453.298 kb on + strand, within BWI76_RS11660 at 2453.332 kb on + strand, within BWI76_RS11660 at 2453.332 kb on - strand, within BWI76_RS11660 at 2453.350 kb on - strand, within BWI76_RS11660 at 2453.350 kb on - strand, within BWI76_RS11660 at 2453.475 kb on + strand at 2453.488 kb on - strand at 2453.515 kb on + strand at 2453.525 kb on - strand at 2453.535 kb on + strand at 2453.576 kb on - strand at 2453.576 kb on - strand at 2453.607 kb on + strand at 2453.623 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 2,452,180 - BWI76_RS11655 0.15 -0.3 2,452,253 + BWI76_RS11655 0.25 +0.0 2,452,253 + BWI76_RS11655 0.25 +0.1 2,452,303 + BWI76_RS11655 0.32 -0.1 2,452,454 + BWI76_RS11655 0.54 -0.8 2,452,477 + BWI76_RS11655 0.57 +0.7 2,452,676 + BWI76_RS11655 0.86 +0.3 2,452,684 - BWI76_RS11655 0.87 -2.3 2,452,685 + BWI76_RS11655 0.87 -0.3 2,452,832 + BWI76_RS11660 0.10 +1.1 2,452,840 - BWI76_RS11660 0.11 -1.1 2,452,847 + BWI76_RS11660 0.13 -0.1 2,452,847 + BWI76_RS11660 0.13 +0.4 2,452,852 + BWI76_RS11660 0.13 +1.1 2,452,885 - BWI76_RS11660 0.18 -0.2 2,452,953 - BWI76_RS11660 0.29 +0.1 2,452,953 - BWI76_RS11660 0.29 +0.3 2,453,031 - BWI76_RS11660 0.41 +0.0 2,453,045 + BWI76_RS11660 0.43 -0.2 2,453,137 - BWI76_RS11660 0.57 -0.2 2,453,139 + BWI76_RS11660 0.57 -0.2 2,453,147 - BWI76_RS11660 0.58 -0.1 2,453,151 + BWI76_RS11660 0.59 +0.8 2,453,288 + BWI76_RS11660 0.80 -0.3 2,453,298 + BWI76_RS11660 0.81 -0.5 2,453,332 + BWI76_RS11660 0.87 -0.4 2,453,332 - BWI76_RS11660 0.87 +0.1 2,453,350 - BWI76_RS11660 0.89 -0.8 2,453,350 - BWI76_RS11660 0.89 -0.3 2,453,475 + -0.4 2,453,488 - -1.0 2,453,515 + +0.3 2,453,525 - -0.3 2,453,535 + -0.7 2,453,576 - -2.1 2,453,576 - -0.1 2,453,607 + +1.0 2,453,623 - -1.2
Or see this region's nucleotide sequence