Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11440 and BWI76_RS11445 are separated by 162 nucleotides BWI76_RS11445 and BWI76_RS11450 are separated by 37 nucleotides BWI76_RS11450 and BWI76_RS11455 are separated by 100 nucleotides BWI76_RS11455 and BWI76_RS11460 overlap by 17 nucleotides
BWI76_RS11440: BWI76_RS11440 - hypothetical protein, at 2,408,280 to 2,408,789
_RS11440
BWI76_RS11445: BWI76_RS11445 - hypothetical protein, at 2,408,952 to 2,409,644
_RS11445
BWI76_RS11450: BWI76_RS11450 - cyanate MFS transporter, at 2,409,682 to 2,410,866
_RS11450
BWI76_RS11455: BWI76_RS11455 - AraC family transcriptional regulator, at 2,410,967 to 2,411,758
_RS11455
BWI76_RS11460: BWI76_RS11460 - DUF441 family protein, at 2,411,742 to 2,412,188
_RS11460
Position (kb)
2409
2410
2411 Strain fitness (log2 ratio)
-1
0
1 at 2408.829 kb on - strand at 2408.949 kb on + strand at 2409.372 kb on - strand, within BWI76_RS11445 at 2409.379 kb on + strand, within BWI76_RS11445 at 2409.387 kb on - strand, within BWI76_RS11445 at 2409.469 kb on + strand, within BWI76_RS11445 at 2409.606 kb on - strand at 2410.009 kb on + strand, within BWI76_RS11450 at 2410.017 kb on - strand, within BWI76_RS11450 at 2410.579 kb on + strand, within BWI76_RS11450 at 2410.592 kb on - strand, within BWI76_RS11450 at 2410.592 kb on - strand, within BWI76_RS11450 at 2410.623 kb on + strand, within BWI76_RS11450 at 2410.726 kb on + strand, within BWI76_RS11450 at 2410.837 kb on + strand at 2411.331 kb on + strand, within BWI76_RS11455 at 2411.569 kb on - strand, within BWI76_RS11455 at 2411.656 kb on - strand, within BWI76_RS11455 at 2411.861 kb on + strand, within BWI76_RS11460
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 2,408,829 - -0.8 2,408,949 + +0.3 2,409,372 - BWI76_RS11445 0.61 -0.2 2,409,379 + BWI76_RS11445 0.62 +0.4 2,409,387 - BWI76_RS11445 0.63 +0.1 2,409,469 + BWI76_RS11445 0.75 +0.2 2,409,606 - -0.2 2,410,009 + BWI76_RS11450 0.28 +0.2 2,410,017 - BWI76_RS11450 0.28 +0.8 2,410,579 + BWI76_RS11450 0.76 +0.2 2,410,592 - BWI76_RS11450 0.77 +1.0 2,410,592 - BWI76_RS11450 0.77 +0.8 2,410,623 + BWI76_RS11450 0.79 +1.7 2,410,726 + BWI76_RS11450 0.88 -0.3 2,410,837 + -0.6 2,411,331 + BWI76_RS11455 0.46 +0.0 2,411,569 - BWI76_RS11455 0.76 -0.2 2,411,656 - BWI76_RS11455 0.87 +0.6 2,411,861 + BWI76_RS11460 0.27 -0.1
Or see this region's nucleotide sequence