Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08130

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08120 and BWI76_RS08125 are separated by 98 nucleotidesBWI76_RS08125 and BWI76_RS08130 overlap by 4 nucleotidesBWI76_RS08130 and BWI76_RS08135 are separated by 143 nucleotides BWI76_RS08120: BWI76_RS08120 - cobalt transporter, at 1,721,499 to 1,722,377 _RS08120 BWI76_RS08125: BWI76_RS08125 - rRNA maturation RNase YbeY, at 1,722,476 to 1,722,943 _RS08125 BWI76_RS08130: BWI76_RS08130 - nucleoside triphosphate hydrolase, at 1,722,940 to 1,723,986 _RS08130 BWI76_RS08135: BWI76_RS08135 - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 1,724,130 to 1,725,554 _RS08135 Position (kb) 1722 1723 1724Strain fitness (log2 ratio) -1 0 1at 1722.199 kb on - strand, within BWI76_RS08120at 1722.482 kb on - strandat 1723.209 kb on - strand, within BWI76_RS08130at 1723.998 kb on - strandat 1724.647 kb on - strand, within BWI76_RS08135at 1724.956 kb on - strand, within BWI76_RS08135

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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1,722,199 - BWI76_RS08120 0.80 +0.3
1,722,482 - -0.6
1,723,209 - BWI76_RS08130 0.26 -0.2
1,723,998 - -0.5
1,724,647 - BWI76_RS08135 0.36 -0.6
1,724,956 - BWI76_RS08135 0.58 +1.0

Or see this region's nucleotide sequence