Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08120

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08115 and BWI76_RS08120 are separated by 22 nucleotidesBWI76_RS08120 and BWI76_RS08125 are separated by 98 nucleotidesBWI76_RS08125 and BWI76_RS08130 overlap by 4 nucleotides BWI76_RS08115: BWI76_RS08115 - apolipoprotein N-acyltransferase, at 1,719,938 to 1,721,476 _RS08115 BWI76_RS08120: BWI76_RS08120 - cobalt transporter, at 1,721,499 to 1,722,377 _RS08120 BWI76_RS08125: BWI76_RS08125 - rRNA maturation RNase YbeY, at 1,722,476 to 1,722,943 _RS08125 BWI76_RS08130: BWI76_RS08130 - nucleoside triphosphate hydrolase, at 1,722,940 to 1,723,986 _RS08130 Position (kb) 1721 1722 1723Strain fitness (log2 ratio) -1 0 1at 1721.755 kb on - strand, within BWI76_RS08120at 1721.839 kb on - strand, within BWI76_RS08120at 1722.199 kb on - strand, within BWI76_RS08120at 1722.482 kb on - strandat 1723.209 kb on - strand, within BWI76_RS08130

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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1,721,755 - BWI76_RS08120 0.29 -0.1
1,721,839 - BWI76_RS08120 0.39 +0.2
1,722,199 - BWI76_RS08120 0.80 +0.3
1,722,482 - -0.6
1,723,209 - BWI76_RS08130 0.26 -0.2

Or see this region's nucleotide sequence