Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07740

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07735 and BWI76_RS07740 are separated by 68 nucleotidesBWI76_RS07740 and BWI76_RS07745 are separated by 370 nucleotides BWI76_RS07735: BWI76_RS07735 - MFS transporter, at 1,640,676 to 1,641,917 _RS07735 BWI76_RS07740: BWI76_RS07740 - Fe2+-enterobactin ABC transporter substrate-binding protein, at 1,641,986 to 1,642,945 _RS07740 BWI76_RS07745: BWI76_RS07745 - isochorismate synthase EntC, at 1,643,316 to 1,644,491 _RS07745 Position (kb) 1641 1642 1643Strain fitness (log2 ratio) -1 0 1at 1641.025 kb on + strand, within BWI76_RS07735at 1641.368 kb on + strand, within BWI76_RS07735at 1641.376 kb on - strand, within BWI76_RS07735at 1641.389 kb on + strand, within BWI76_RS07735at 1641.498 kb on + strand, within BWI76_RS07735at 1641.587 kb on + strand, within BWI76_RS07735at 1641.587 kb on + strand, within BWI76_RS07735at 1641.595 kb on - strand, within BWI76_RS07735at 1641.860 kb on - strandat 1642.278 kb on - strand, within BWI76_RS07740at 1642.726 kb on - strand, within BWI76_RS07740at 1643.195 kb on + strandat 1643.579 kb on + strand, within BWI76_RS07745at 1643.587 kb on - strand, within BWI76_RS07745at 1643.596 kb on + strand, within BWI76_RS07745at 1643.670 kb on - strand, within BWI76_RS07745at 1643.848 kb on + strand, within BWI76_RS07745at 1643.848 kb on + strand, within BWI76_RS07745

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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1,641,025 + BWI76_RS07735 0.28 +0.5
1,641,368 + BWI76_RS07735 0.56 -0.1
1,641,376 - BWI76_RS07735 0.56 +0.4
1,641,389 + BWI76_RS07735 0.57 +0.2
1,641,498 + BWI76_RS07735 0.66 -0.0
1,641,587 + BWI76_RS07735 0.73 +0.5
1,641,587 + BWI76_RS07735 0.73 +0.4
1,641,595 - BWI76_RS07735 0.74 -1.3
1,641,860 - +0.4
1,642,278 - BWI76_RS07740 0.30 -1.6
1,642,726 - BWI76_RS07740 0.77 -0.1
1,643,195 + -0.7
1,643,579 + BWI76_RS07745 0.22 -0.3
1,643,587 - BWI76_RS07745 0.23 +0.2
1,643,596 + BWI76_RS07745 0.24 -0.1
1,643,670 - BWI76_RS07745 0.30 +0.5
1,643,848 + BWI76_RS07745 0.45 +0.8
1,643,848 + BWI76_RS07745 0.45 -0.7

Or see this region's nucleotide sequence