Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02780 and BWI76_RS02785 are separated by 2 nucleotides BWI76_RS02785 and BWI76_RS02790 are separated by 156 nucleotides BWI76_RS02790 and BWI76_RS02795 are separated by 403 nucleotides
BWI76_RS02780: BWI76_RS02780 - translocation and assembly module TamB, at 564,944 to 568,720
_RS02780
BWI76_RS02785: BWI76_RS02785 - AIG2 family protein, at 568,723 to 569,067
_RS02785
BWI76_RS02790: BWI76_RS02790 - inorganic pyrophosphatase, at 569,224 to 569,751
_RS02790
BWI76_RS02795: BWI76_RS02795 - periplasmic binding protein/LacI transcriptional regulator, at 570,155 to 571,111
_RS02795
Position (kb) 569
570 Strain fitness (log2 ratio) -2
-1
0
1
2 at 568.372 kb on + strand at 568.379 kb on - strand at 568.394 kb on + strand at 568.475 kb on - strand at 568.530 kb on + strand at 568.550 kb on + strand at 568.571 kb on - strand at 568.622 kb on + strand at 568.685 kb on - strand at 568.745 kb on + strand at 568.980 kb on - strand, within BWI76_RS02785 at 569.011 kb on + strand, within BWI76_RS02785 at 569.019 kb on - strand, within BWI76_RS02785 at 569.798 kb on - strand at 569.849 kb on - strand at 570.020 kb on + strand at 570.096 kb on + strand at 570.145 kb on - strand at 570.208 kb on + strand at 570.322 kb on + strand, within BWI76_RS02795 at 570.440 kb on + strand, within BWI76_RS02795 at 570.440 kb on + strand, within BWI76_RS02795 at 570.536 kb on - strand, within BWI76_RS02795 at 570.577 kb on + strand, within BWI76_RS02795 at 570.619 kb on + strand, within BWI76_RS02795 at 570.747 kb on - strand, within BWI76_RS02795
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 568,372 + +0.3 568,379 - +0.4 568,394 + -0.3 568,475 - -0.4 568,530 + +0.2 568,550 + -0.2 568,571 - -1.9 568,622 + +0.3 568,685 - +0.4 568,745 + -0.6 568,980 - BWI76_RS02785 0.74 -0.7 569,011 + BWI76_RS02785 0.83 -0.2 569,019 - BWI76_RS02785 0.86 -0.4 569,798 - +1.1 569,849 - -0.7 570,020 + +2.1 570,096 + +0.9 570,145 - -0.5 570,208 + +0.2 570,322 + BWI76_RS02795 0.17 -0.7 570,440 + BWI76_RS02795 0.30 +1.0 570,440 + BWI76_RS02795 0.30 -0.4 570,536 - BWI76_RS02795 0.40 +0.2 570,577 + BWI76_RS02795 0.44 -0.0 570,619 + BWI76_RS02795 0.48 -0.5 570,747 - BWI76_RS02795 0.62 +0.1
Or see this region's nucleotide sequence