Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01055 and BWI76_RS01060 are separated by 18 nucleotides BWI76_RS01060 and BWI76_RS01065 are separated by 134 nucleotides
BWI76_RS01055: BWI76_RS01055 - LysR family transcriptional regulator, at 215,873 to 216,793
_RS01055
BWI76_RS01060: BWI76_RS01060 - guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase, at 216,812 to 218,311
_RS01060
BWI76_RS01065: BWI76_RS01065 - ATP-dependent RNA helicase RhlB, at 218,446 to 219,711
_RS01065
Position (kb)
216
217
218
219 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 215.819 kb on + strand at 215.825 kb on - strand at 215.825 kb on - strand at 215.886 kb on + strand at 215.888 kb on + strand at 215.888 kb on + strand at 215.894 kb on - strand at 215.896 kb on - strand at 215.897 kb on + strand at 215.901 kb on + strand at 215.903 kb on + strand at 215.916 kb on - strand at 215.923 kb on + strand at 215.923 kb on + strand at 215.931 kb on - strand at 215.931 kb on - strand at 215.931 kb on - strand at 215.933 kb on + strand at 215.933 kb on + strand at 215.933 kb on + strand at 215.941 kb on - strand at 215.941 kb on - strand at 215.941 kb on - strand at 215.941 kb on - strand at 215.951 kb on + strand at 215.953 kb on + strand at 215.958 kb on + strand at 215.964 kb on + strand at 215.964 kb on + strand at 215.964 kb on + strand at 215.972 kb on - strand, within BWI76_RS01055 at 215.972 kb on - strand, within BWI76_RS01055 at 215.977 kb on - strand, within BWI76_RS01055 at 216.009 kb on + strand, within BWI76_RS01055 at 216.017 kb on + strand, within BWI76_RS01055 at 216.036 kb on + strand, within BWI76_RS01055 at 216.044 kb on - strand, within BWI76_RS01055 at 216.073 kb on + strand, within BWI76_RS01055 at 216.113 kb on + strand, within BWI76_RS01055 at 216.121 kb on + strand, within BWI76_RS01055 at 216.121 kb on + strand, within BWI76_RS01055 at 216.121 kb on + strand, within BWI76_RS01055 at 216.122 kb on + strand, within BWI76_RS01055 at 216.129 kb on - strand, within BWI76_RS01055 at 216.129 kb on - strand, within BWI76_RS01055 at 216.129 kb on - strand, within BWI76_RS01055 at 216.129 kb on - strand, within BWI76_RS01055 at 216.129 kb on - strand, within BWI76_RS01055 at 216.129 kb on - strand, within BWI76_RS01055 at 216.130 kb on - strand, within BWI76_RS01055 at 216.130 kb on - strand, within BWI76_RS01055 at 216.176 kb on + strand, within BWI76_RS01055 at 216.181 kb on + strand, within BWI76_RS01055 at 216.184 kb on - strand, within BWI76_RS01055 at 216.184 kb on - strand, within BWI76_RS01055 at 216.184 kb on - strand, within BWI76_RS01055 at 216.184 kb on - strand, within BWI76_RS01055 at 216.189 kb on + strand, within BWI76_RS01055 at 216.191 kb on - strand, within BWI76_RS01055 at 216.227 kb on + strand, within BWI76_RS01055 at 216.335 kb on - strand, within BWI76_RS01055 at 216.367 kb on + strand, within BWI76_RS01055 at 216.390 kb on - strand, within BWI76_RS01055 at 216.445 kb on - strand, within BWI76_RS01055 at 216.743 kb on + strand at 216.869 kb on - strand at 217.032 kb on + strand, within BWI76_RS01060 at 217.032 kb on + strand, within BWI76_RS01060 at 217.227 kb on - strand, within BWI76_RS01060 at 217.430 kb on - strand, within BWI76_RS01060 at 217.434 kb on - strand, within BWI76_RS01060 at 217.435 kb on - strand, within BWI76_RS01060 at 217.442 kb on - strand, within BWI76_RS01060 at 217.717 kb on + strand, within BWI76_RS01060 at 217.720 kb on - strand, within BWI76_RS01060 at 217.835 kb on - strand, within BWI76_RS01060 at 217.993 kb on - strand, within BWI76_RS01060 at 218.297 kb on - strand at 218.299 kb on + strand at 218.321 kb on - strand at 218.332 kb on + strand at 218.340 kb on - strand at 218.448 kb on + strand at 218.451 kb on - strand at 218.533 kb on - strand at 218.533 kb on - strand at 218.965 kb on + strand, within BWI76_RS01065 at 218.966 kb on + strand, within BWI76_RS01065 at 219.065 kb on + strand, within BWI76_RS01065 at 219.124 kb on - strand, within BWI76_RS01065 at 219.124 kb on - strand, within BWI76_RS01065 at 219.254 kb on - strand, within BWI76_RS01065
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 215,819 + -1.1 215,825 - +1.1 215,825 - +0.3 215,886 + +0.1 215,888 + -0.7 215,888 + +0.3 215,894 - +0.1 215,896 - -0.3 215,897 + -1.5 215,901 + +0.5 215,903 + -0.1 215,916 - -0.5 215,923 + -1.2 215,923 + +1.6 215,931 - +0.2 215,931 - +1.7 215,931 - -0.0 215,933 + -0.1 215,933 + +0.7 215,933 + +0.1 215,941 - +0.9 215,941 - +0.1 215,941 - +0.5 215,941 - +0.2 215,951 + +0.1 215,953 + +0.5 215,958 + +0.3 215,964 + -0.1 215,964 + -0.5 215,964 + -0.3 215,972 - BWI76_RS01055 0.11 -0.3 215,972 - BWI76_RS01055 0.11 -0.5 215,977 - BWI76_RS01055 0.11 -0.3 216,009 + BWI76_RS01055 0.15 +1.1 216,017 + BWI76_RS01055 0.16 -0.2 216,036 + BWI76_RS01055 0.18 +1.4 216,044 - BWI76_RS01055 0.19 +0.5 216,073 + BWI76_RS01055 0.22 -0.8 216,113 + BWI76_RS01055 0.26 -0.7 216,121 + BWI76_RS01055 0.27 +0.1 216,121 + BWI76_RS01055 0.27 -1.3 216,121 + BWI76_RS01055 0.27 -0.4 216,122 + BWI76_RS01055 0.27 -1.0 216,129 - BWI76_RS01055 0.28 +0.3 216,129 - BWI76_RS01055 0.28 +0.9 216,129 - BWI76_RS01055 0.28 -0.6 216,129 - BWI76_RS01055 0.28 +0.1 216,129 - BWI76_RS01055 0.28 -0.3 216,129 - BWI76_RS01055 0.28 +0.5 216,130 - BWI76_RS01055 0.28 +0.5 216,130 - BWI76_RS01055 0.28 -1.0 216,176 + BWI76_RS01055 0.33 +1.0 216,181 + BWI76_RS01055 0.33 +0.4 216,184 - BWI76_RS01055 0.34 +0.4 216,184 - BWI76_RS01055 0.34 -0.3 216,184 - BWI76_RS01055 0.34 -0.1 216,184 - BWI76_RS01055 0.34 +0.1 216,189 + BWI76_RS01055 0.34 -0.9 216,191 - BWI76_RS01055 0.35 +0.9 216,227 + BWI76_RS01055 0.38 +0.6 216,335 - BWI76_RS01055 0.50 -0.5 216,367 + BWI76_RS01055 0.54 -0.3 216,390 - BWI76_RS01055 0.56 -0.3 216,445 - BWI76_RS01055 0.62 -2.1 216,743 + -0.5 216,869 - -0.5 217,032 + BWI76_RS01060 0.15 -0.2 217,032 + BWI76_RS01060 0.15 -0.8 217,227 - BWI76_RS01060 0.28 -0.7 217,430 - BWI76_RS01060 0.41 -0.7 217,434 - BWI76_RS01060 0.41 -1.1 217,435 - BWI76_RS01060 0.42 -0.6 217,442 - BWI76_RS01060 0.42 -0.5 217,717 + BWI76_RS01060 0.60 -0.8 217,720 - BWI76_RS01060 0.61 -1.5 217,835 - BWI76_RS01060 0.68 +1.3 217,993 - BWI76_RS01060 0.79 -0.4 218,297 - -0.8 218,299 + -1.1 218,321 - +0.1 218,332 + -0.6 218,340 - -0.4 218,448 + +2.1 218,451 - -0.3 218,533 - -0.1 218,533 - -2.6 218,965 + BWI76_RS01065 0.41 -0.1 218,966 + BWI76_RS01065 0.41 -0.6 219,065 + BWI76_RS01065 0.49 +0.2 219,124 - BWI76_RS01065 0.54 +0.9 219,124 - BWI76_RS01065 0.54 +0.1 219,254 - BWI76_RS01065 0.64 -0.5
Or see this region's nucleotide sequence