Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00635 and BWI76_RS00640 are separated by 54 nucleotides BWI76_RS00640 and BWI76_RS00645 overlap by 4 nucleotides BWI76_RS00645 and BWI76_RS00650 are separated by 148 nucleotides
BWI76_RS00635: BWI76_RS00635 - inulin fructotransferase (DFA-I-forming), at 129,269 to 130,633
_RS00635
BWI76_RS00640: BWI76_RS00640 - L-rhamnose mutarotase, at 130,688 to 131,002
_RS00640
BWI76_RS00645: BWI76_RS00645 - lactaldehyde reductase, at 130,999 to 132,147
_RS00645
BWI76_RS00650: BWI76_RS00650 - rhamnose ABC transporter permease component, at 132,296 to 133,300
_RS00650
Position (kb) 130
131
132
133 Strain fitness (log2 ratio) -2
-1
0
1
2 at 130.051 kb on - strand, within BWI76_RS00635 at 130.056 kb on + strand, within BWI76_RS00635 at 130.071 kb on + strand at 130.071 kb on + strand, within BWI76_RS00635 at 130.073 kb on + strand, within BWI76_RS00635 at 130.084 kb on - strand, within BWI76_RS00635 at 130.111 kb on + strand, within BWI76_RS00635 at 130.136 kb on + strand, within BWI76_RS00635 at 130.144 kb on - strand, within BWI76_RS00635 at 130.162 kb on - strand, within BWI76_RS00635 at 130.185 kb on + strand, within BWI76_RS00635 at 130.185 kb on + strand, within BWI76_RS00635 at 130.185 kb on + strand, within BWI76_RS00635 at 130.185 kb on + strand, within BWI76_RS00635 at 130.185 kb on + strand, within BWI76_RS00635 at 130.187 kb on + strand, within BWI76_RS00635 at 130.187 kb on + strand, within BWI76_RS00635 at 130.187 kb on + strand, within BWI76_RS00635 at 130.195 kb on - strand, within BWI76_RS00635 at 130.210 kb on + strand, within BWI76_RS00635 at 130.219 kb on - strand, within BWI76_RS00635 at 130.228 kb on + strand, within BWI76_RS00635 at 130.236 kb on + strand, within BWI76_RS00635 at 130.236 kb on + strand, within BWI76_RS00635 at 130.236 kb on + strand, within BWI76_RS00635 at 130.236 kb on + strand, within BWI76_RS00635 at 130.236 kb on + strand, within BWI76_RS00635 at 130.236 kb on - strand, within BWI76_RS00635 at 130.237 kb on - strand, within BWI76_RS00635 at 130.243 kb on - strand, within BWI76_RS00635 at 130.246 kb on + strand, within BWI76_RS00635 at 130.251 kb on + strand at 130.254 kb on - strand, within BWI76_RS00635 at 130.254 kb on - strand, within BWI76_RS00635 at 130.254 kb on - strand, within BWI76_RS00635 at 130.307 kb on - strand, within BWI76_RS00635 at 130.317 kb on - strand at 130.329 kb on + strand, within BWI76_RS00635 at 130.329 kb on + strand, within BWI76_RS00635 at 130.329 kb on + strand, within BWI76_RS00635 at 130.329 kb on + strand, within BWI76_RS00635 at 130.337 kb on - strand, within BWI76_RS00635 at 130.337 kb on - strand, within BWI76_RS00635 at 130.337 kb on - strand, within BWI76_RS00635 at 130.403 kb on + strand, within BWI76_RS00635 at 130.462 kb on + strand, within BWI76_RS00635 at 130.462 kb on + strand, within BWI76_RS00635 at 130.462 kb on + strand, within BWI76_RS00635 at 130.465 kb on - strand, within BWI76_RS00635 at 130.470 kb on - strand, within BWI76_RS00635 at 130.488 kb on + strand, within BWI76_RS00635 at 130.488 kb on + strand, within BWI76_RS00635 at 130.488 kb on + strand, within BWI76_RS00635 at 130.497 kb on + strand at 130.525 kb on + strand at 130.585 kb on - strand at 130.599 kb on + strand at 130.661 kb on + strand at 130.707 kb on + strand at 130.733 kb on - strand, within BWI76_RS00640 at 130.842 kb on - strand, within BWI76_RS00640 at 131.161 kb on - strand, within BWI76_RS00645 at 131.192 kb on - strand, within BWI76_RS00645 at 131.386 kb on + strand, within BWI76_RS00645 at 131.386 kb on + strand, within BWI76_RS00645 at 131.394 kb on - strand, within BWI76_RS00645 at 131.512 kb on - strand, within BWI76_RS00645 at 131.555 kb on - strand, within BWI76_RS00645 at 131.563 kb on - strand, within BWI76_RS00645 at 131.674 kb on + strand, within BWI76_RS00645 at 131.792 kb on - strand, within BWI76_RS00645 at 131.945 kb on - strand, within BWI76_RS00645 at 132.025 kb on - strand, within BWI76_RS00645 at 132.136 kb on + strand at 132.186 kb on + strand at 132.266 kb on - strand at 132.523 kb on + strand, within BWI76_RS00650 at 132.619 kb on + strand, within BWI76_RS00650 at 132.684 kb on + strand, within BWI76_RS00650 at 132.786 kb on - strand, within BWI76_RS00650 at 132.791 kb on - strand, within BWI76_RS00650 at 132.832 kb on + strand, within BWI76_RS00650 at 132.897 kb on + strand, within BWI76_RS00650 at 132.907 kb on + strand, within BWI76_RS00650 at 132.947 kb on + strand, within BWI76_RS00650 at 133.029 kb on - strand, within BWI76_RS00650
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 130,051 - BWI76_RS00635 0.57 +0.8 130,056 + BWI76_RS00635 0.58 -0.5 130,071 + +0.1 130,071 + BWI76_RS00635 0.59 +1.1 130,073 + BWI76_RS00635 0.59 +1.1 130,084 - BWI76_RS00635 0.60 +0.8 130,111 + BWI76_RS00635 0.62 -0.1 130,136 + BWI76_RS00635 0.64 +0.1 130,144 - BWI76_RS00635 0.64 +0.3 130,162 - BWI76_RS00635 0.65 -0.3 130,185 + BWI76_RS00635 0.67 -0.3 130,185 + BWI76_RS00635 0.67 +0.1 130,185 + BWI76_RS00635 0.67 +0.9 130,185 + BWI76_RS00635 0.67 -1.2 130,185 + BWI76_RS00635 0.67 +1.1 130,187 + BWI76_RS00635 0.67 +0.7 130,187 + BWI76_RS00635 0.67 +0.2 130,187 + BWI76_RS00635 0.67 -0.4 130,195 - BWI76_RS00635 0.68 +0.2 130,210 + BWI76_RS00635 0.69 -0.6 130,219 - BWI76_RS00635 0.70 +0.8 130,228 + BWI76_RS00635 0.70 +0.8 130,236 + BWI76_RS00635 0.71 +0.3 130,236 + BWI76_RS00635 0.71 -2.6 130,236 + BWI76_RS00635 0.71 +1.3 130,236 + BWI76_RS00635 0.71 +0.9 130,236 + BWI76_RS00635 0.71 +0.3 130,236 - BWI76_RS00635 0.71 +0.1 130,237 - BWI76_RS00635 0.71 -0.9 130,243 - BWI76_RS00635 0.71 -0.3 130,246 + BWI76_RS00635 0.72 +0.4 130,251 + +1.1 130,254 - BWI76_RS00635 0.72 +0.1 130,254 - BWI76_RS00635 0.72 -0.5 130,254 - BWI76_RS00635 0.72 +0.5 130,307 - BWI76_RS00635 0.76 +0.5 130,317 - +2.7 130,329 + BWI76_RS00635 0.78 -0.2 130,329 + BWI76_RS00635 0.78 +0.2 130,329 + BWI76_RS00635 0.78 -0.1 130,329 + BWI76_RS00635 0.78 +1.2 130,337 - BWI76_RS00635 0.78 +0.4 130,337 - BWI76_RS00635 0.78 +0.5 130,337 - BWI76_RS00635 0.78 -0.2 130,403 + BWI76_RS00635 0.83 +0.3 130,462 + BWI76_RS00635 0.87 -0.2 130,462 + BWI76_RS00635 0.87 +1.9 130,462 + BWI76_RS00635 0.87 +0.1 130,465 - BWI76_RS00635 0.88 -0.2 130,470 - BWI76_RS00635 0.88 -0.4 130,488 + BWI76_RS00635 0.89 +1.1 130,488 + BWI76_RS00635 0.89 +0.3 130,488 + BWI76_RS00635 0.89 +0.2 130,497 + +0.4 130,525 + +0.4 130,585 - -0.4 130,599 + -0.4 130,661 + -0.3 130,707 + +1.0 130,733 - BWI76_RS00640 0.14 +0.1 130,842 - BWI76_RS00640 0.49 +0.0 131,161 - BWI76_RS00645 0.14 +0.2 131,192 - BWI76_RS00645 0.17 +0.4 131,386 + BWI76_RS00645 0.34 -0.1 131,386 + BWI76_RS00645 0.34 -0.3 131,394 - BWI76_RS00645 0.34 +0.3 131,512 - BWI76_RS00645 0.45 +0.2 131,555 - BWI76_RS00645 0.48 -0.6 131,563 - BWI76_RS00645 0.49 -2.7 131,674 + BWI76_RS00645 0.59 -0.2 131,792 - BWI76_RS00645 0.69 +0.0 131,945 - BWI76_RS00645 0.82 -0.1 132,025 - BWI76_RS00645 0.89 +0.1 132,136 + -0.6 132,186 + +0.1 132,266 - +0.6 132,523 + BWI76_RS00650 0.23 +0.7 132,619 + BWI76_RS00650 0.32 -0.2 132,684 + BWI76_RS00650 0.39 +0.8 132,786 - BWI76_RS00650 0.49 +0.1 132,791 - BWI76_RS00650 0.49 +0.2 132,832 + BWI76_RS00650 0.53 +0.9 132,897 + BWI76_RS00650 0.60 -0.5 132,907 + BWI76_RS00650 0.61 +1.6 132,947 + BWI76_RS00650 0.65 +1.9 133,029 - BWI76_RS00650 0.73 +0.2
Or see this region's nucleotide sequence