Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2612

Experiment: Rifampicin 0.000625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000625 mg/ml
2,692,944	+				+0.7
2,693,014	+				-2.3
2,693,697	+				+4.2
2,693,697	+				+0.8
2,693,697	+				+1.1
2,693,705	-				-2.0
2,693,705	-				-2.7
2,693,705	-				+0.3
2,693,705	-				+2.3
2,693,705	-				+0.1
2,693,720	+				+1.1
2,693,728	-				-0.5
2,693,728	-				-0.7
2,693,737	+				+2.3
2,693,750	-				-1.3
2,693,750	-				+1.6
2,694,965	-				-0.4
2,695,084	+				+2.3
2,695,085	+				-2.3
2,695,085	+				-1.3
2,695,087	-				+1.7
2,695,093	-				+0.3
2,695,108	+				-2.5
2,695,108	+				+1.4
2,695,116	-				-0.7
2,695,116	-				-1.0
2,695,116	-				+0.5
2,695,126	-				-2.5
2,695,127	-				+0.3
2,695,136	-	cbbZp	Synpcc7942_2613	0.11	-3.6
2,695,149	+	cbbZp	Synpcc7942_2613	0.12	-0.3
2,695,157	-	cbbZp	Synpcc7942_2613	0.13	-2.5
2,695,178	+	cbbZp	Synpcc7942_2613	0.16	+2.2
2,695,205	+	cbbZp	Synpcc7942_2613	0.19	-1.7
2,695,220	+	cbbZp	Synpcc7942_2613	0.21	+1.4
2,695,223	+	cbbZp	Synpcc7942_2613	0.21	-0.7
2,695,231	-	cbbZp	Synpcc7942_2613	0.22	+0.1
2,695,231	-	cbbZp	Synpcc7942_2613	0.22	-0.3
2,695,246	-	cbbZp	Synpcc7942_2613	0.24	-2.5
2,695,273	-	cbbZp	Synpcc7942_2613	0.27	-1.3
2,695,280	-	cbbZp	Synpcc7942_2613	0.28	+0.3
2,695,280	-				-0.7
2,695,280	-	cbbZp	Synpcc7942_2613	0.28	+1.6
2,695,281	-	cbbZp	Synpcc7942_2613	0.28	-0.6
2,695,294	+	cbbZp	Synpcc7942_2613	0.30	-1.1
2,695,311	+	cbbZp	Synpcc7942_2613	0.32	+2.0
2,695,311	+	cbbZp	Synpcc7942_2613	0.32	-0.0
2,695,325	+	cbbZp	Synpcc7942_2613	0.34	-2.0
2,695,330	+	cbbZp	Synpcc7942_2613	0.34	+0.3
2,695,384	+	cbbZp	Synpcc7942_2613	0.41	-1.3
2,695,384	+	cbbZp	Synpcc7942_2613	0.41	+0.3
2,695,389	+	cbbZp	Synpcc7942_2613	0.41	-0.7
2,695,392	-	cbbZp	Synpcc7942_2613	0.42	+2.9
2,695,397	-	cbbZp	Synpcc7942_2613	0.42	-3.7
2,695,423	+	cbbZp	Synpcc7942_2613	0.45	+1.4
2,695,432	+	cbbZp	Synpcc7942_2613	0.47	+1.9
2,695,432	-	cbbZp	Synpcc7942_2613	0.47	-1.3
2,695,440	-	cbbZp	Synpcc7942_2613	0.48	-1.5
2,695,458	+	cbbZp	Synpcc7942_2613	0.50	-2.0
2,695,488	-	cbbZp	Synpcc7942_2613	0.53	-0.7
2,695,492	-	cbbZp	Synpcc7942_2613	0.54	-1.3
2,695,514	+	cbbZp	Synpcc7942_2613	0.57	-0.7
2,695,521	+	cbbZp	Synpcc7942_2613	0.57	-0.7
2,695,529	+	cbbZp	Synpcc7942_2613	0.58	+2.3
2,695,529	+	cbbZp	Synpcc7942_2613	0.58	+1.2
2,695,535	-	cbbZp	Synpcc7942_2613	0.59	-1.3
2,695,537	-	cbbZp	Synpcc7942_2613	0.59	+1.1
2,695,569	+	cbbZp	Synpcc7942_2613	0.63	+0.8
2,695,571	+	cbbZp	Synpcc7942_2613	0.64	+0.9
2,695,588	+	cbbZp	Synpcc7942_2613	0.66	-1.7
2,695,695	+	cbbZp	Synpcc7942_2613	0.79	-2.0
2,695,703	-	cbbZp	Synpcc7942_2613	0.80	-1.3
2,695,715	-	cbbZp	Synpcc7942_2613	0.81	-2.3
2,695,738	+	cbbZp	Synpcc7942_2613	0.84	+2.2
2,695,764	+	cbbZp	Synpcc7942_2613	0.87	+1.3
2,695,788	-				+0.8
2,695,815	-				+1.3
2,695,817	+				+2.1