Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2501

Experiment: Rifampicin 0.000625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000625 mg/ml
2,580,948	+				-1.3
2,580,956	-				-1.7
2,580,956	-				+0.2
2,581,006	+				-0.3
2,581,025	-				-2.9
2,581,036	-				+0.3
2,581,053	+				+2.3
2,581,053	+				+0.7
2,581,053	+				+1.6
2,581,088	+				-0.7
2,581,094	+				+0.5
2,581,094	+				+0.3
2,581,102	-				+1.6
2,581,125	+				-1.7
2,581,127	+				+0.6
2,581,137	+				-1.3
2,581,137	+				+0.3
2,581,145	-				-0.1
2,581,145	-				-0.7
2,581,145	-				+2.4
2,581,156	+				-0.9
2,581,167	-		Synpcc7942_2500	0.11	-1.9
2,581,194	-		Synpcc7942_2500	0.16	-2.4
2,581,228	+				+0.3
2,581,228	+		Synpcc7942_2500	0.21	+0.3
2,581,228	+		Synpcc7942_2500	0.21	+2.1
2,581,228	+		Synpcc7942_2500	0.21	+1.2
2,581,236	-		Synpcc7942_2500	0.23	-1.3
2,581,248	-		Synpcc7942_2500	0.24	-1.9
2,581,279	+		Synpcc7942_2500	0.29	-1.3
2,581,281	-		Synpcc7942_2500	0.30	-0.1
2,581,281	-		Synpcc7942_2500	0.30	-1.7
2,581,307	+		Synpcc7942_2500	0.34	+1.3
2,581,313	+		Synpcc7942_2500	0.35	-0.8
2,581,313	-		Synpcc7942_2500	0.35	-0.1
2,581,313	-		Synpcc7942_2500	0.35	-1.3
2,581,315	+		Synpcc7942_2500	0.35	+1.6
2,581,317	+		Synpcc7942_2500	0.36	-1.2
2,581,317	+		Synpcc7942_2500	0.36	+2.1
2,581,370	+		Synpcc7942_2500	0.44	-1.3
2,581,444	+		Synpcc7942_2500	0.56	+1.3
2,581,494	+		Synpcc7942_2500	0.64	-2.3
2,581,527	+		Synpcc7942_2500	0.69	-1.3
2,581,535	-		Synpcc7942_2500	0.71	+1.9
2,581,554	-		Synpcc7942_2500	0.74	-2.0
2,581,568	+		Synpcc7942_2500	0.76	-0.4
2,581,593	+		Synpcc7942_2500	0.80	+0.6
2,581,614	-		Synpcc7942_2500	0.83	+0.9
2,581,614	-		Synpcc7942_2500	0.83	+0.3
2,581,642	+		Synpcc7942_2500	0.88	-1.3
2,581,650	+				+1.6
2,581,699	+				-1.3
2,581,709	-				-1.0
2,581,742	+				-0.7
2,581,755	-				+0.3
2,581,756	+				-2.3
2,581,801	+				-2.9
2,581,803	+				+0.9
2,581,803	+				-2.0
2,581,811	-				+0.7
2,581,814	+				+0.8
2,581,816	-				+1.3
2,581,822	-				-0.7
2,581,822	-				-0.2
2,581,908	-				-0.7
2,582,981	+				-2.0
2,582,981	+				-1.1
2,582,989	-				+0.7
2,582,997	+				+3.2
2,583,005	-				-1.3
2,583,005	-				+0.3
2,583,005	-				-0.7
2,583,013	+				+0.7
2,583,031	-				+2.1
2,583,114	-				+0.3
2,583,123	+				+0.3
2,583,133	+		Synpcc7942_2502	0.10	+0.8
2,583,200	-		Synpcc7942_2502	0.15	-0.3
2,583,228	-		Synpcc7942_2502	0.17	-1.3
2,583,242	-		Synpcc7942_2502	0.18	-2.3
2,583,254	-		Synpcc7942_2502	0.19	+1.2
2,583,290	+		Synpcc7942_2502	0.22	-3.0
2,583,291	+		Synpcc7942_2502	0.22	-2.7
2,583,299	-		Synpcc7942_2502	0.23	-2.5
2,583,301	+		Synpcc7942_2502	0.23	-0.7
2,583,331	+		Synpcc7942_2502	0.25	-1.7
2,583,336	+		Synpcc7942_2502	0.26	-1.7
2,583,339	-		Synpcc7942_2502	0.26	+0.1
2,583,345	+		Synpcc7942_2502	0.26	+0.3
2,583,357	+		Synpcc7942_2502	0.27	-0.3
2,583,424	-		Synpcc7942_2502	0.32	-0.7
2,583,486	+		Synpcc7942_2502	0.37	+0.6
2,583,494	-		Synpcc7942_2502	0.38	-2.5
2,583,494	-				-0.7
2,583,496	+		Synpcc7942_2502	0.38	+1.3
2,583,496	+		Synpcc7942_2502	0.38	+3.1
2,583,499	-		Synpcc7942_2502	0.38	+3.0
2,583,504	-		Synpcc7942_2502	0.38	+1.3
2,583,504	-		Synpcc7942_2502	0.38	-1.3
2,583,530	+		Synpcc7942_2502	0.40	-1.7
2,583,530	+		Synpcc7942_2502	0.40	+1.9
2,583,538	-		Synpcc7942_2502	0.41	-0.3
2,583,547	+		Synpcc7942_2502	0.42	-1.7
2,583,604	+				+1.3
2,583,607	-		Synpcc7942_2502	0.46	+1.3
2,583,623	+		Synpcc7942_2502	0.47	-0.3
2,583,627	+		Synpcc7942_2502	0.48	-1.3
2,583,648	+		Synpcc7942_2502	0.49	+0.3
2,583,648	+		Synpcc7942_2502	0.49	-2.7
2,583,651	-		Synpcc7942_2502	0.50	+3.0
2,583,651	-		Synpcc7942_2502	0.50	+0.1
2,583,661	+		Synpcc7942_2502	0.50	+2.1
2,583,661	+		Synpcc7942_2502	0.50	-1.7
2,583,661	+		Synpcc7942_2502	0.50	-1.3
2,583,669	-		Synpcc7942_2502	0.51	+0.3
2,583,731	-		Synpcc7942_2502	0.56	+2.8
2,583,780	-		Synpcc7942_2502	0.59	+0.3
2,583,844	-		Synpcc7942_2502	0.64	-0.7
2,583,883	+		Synpcc7942_2502	0.67	+0.9
2,583,904	-		Synpcc7942_2502	0.69	+0.5
2,583,952	+		Synpcc7942_2502	0.72	-2.5
2,584,001	-		Synpcc7942_2502	0.76	-0.7