Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2298

Experiment: Rifampicin 0.000625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000625 mg/ml
2,367,989	-	tal	Synpcc7942_2297	0.39	-0.5
2,368,125	-				-0.7
2,368,190	+	tal	Synpcc7942_2297	0.55	+0.7
2,368,190	+	tal	Synpcc7942_2297	0.55	-0.7
2,368,198	-	tal	Synpcc7942_2297	0.56	-0.6
2,368,207	+	tal	Synpcc7942_2297	0.57	-1.1
2,368,212	+	tal	Synpcc7942_2297	0.57	-3.0
2,368,212	+	tal	Synpcc7942_2297	0.57	-0.5
2,368,227	-	tal	Synpcc7942_2297	0.59	-0.6
2,368,283	-	tal	Synpcc7942_2297	0.63	-2.6
2,368,340	+	tal	Synpcc7942_2297	0.68	+0.7
2,368,463	+	tal	Synpcc7942_2297	0.78	-1.0
2,368,511	+	tal	Synpcc7942_2297	0.82	-0.5
2,368,527	+	tal	Synpcc7942_2297	0.84	-2.0
2,368,528	-	tal	Synpcc7942_2297	0.84	-2.3
2,368,535	-	tal	Synpcc7942_2297	0.84	-0.2
2,368,535	-	tal	Synpcc7942_2297	0.84	+2.2
2,368,536	+	tal	Synpcc7942_2297	0.84	-3.3
2,368,597	+	tal	Synpcc7942_2297	0.90	-1.5
2,368,602	+				-0.7
2,368,605	-				-0.7
2,368,605	-				-3.0
2,368,607	+				-1.7
2,368,612	+				-0.9
2,368,612	+				-0.1
2,368,615	-				-1.3
2,368,615	-				-3.8
2,368,622	-				-0.7
2,368,649	-				-1.3
2,368,652	+				+0.3
2,368,660	-				+1.3
2,368,660	-				-1.0
2,368,672	+				+0.3
2,368,690	-				+0.3
2,368,717	+				-0.9
2,368,717	+				-0.3
2,368,725	-				+0.2
2,368,725	-				+2.0
2,368,751	+				+0.7
2,368,839	-				-1.9
2,368,871	+				+0.3
2,368,874	-				+0.5
2,368,891	-				-0.7
2,368,891	-				-0.4
2,368,891	-				+0.4
2,368,897	-				-1.0
2,368,923	+				-1.3
2,368,929	+				+2.3
2,368,929	+				+0.9
2,368,944	+				+0.3
2,368,952	-				-0.3
2,368,954	+				-0.7
2,368,961	+				-2.5
2,368,968	-				-2.0
2,368,969	-				+1.7
2,369,181	+	ruvA	Synpcc7942_2298	0.34	-2.3
2,369,400	+	ruvA	Synpcc7942_2298	0.70	+1.9
2,369,442	-	ruvA	Synpcc7942_2298	0.76	-0.7
2,369,470	+				+0.3
2,369,577	+				-0.4
2,369,865	+	rpsO	Synpcc7942_2299	0.85	-1.7
2,369,867	+	rpsO	Synpcc7942_2299	0.86	-2.9
2,369,908	-				+1.6
2,370,011	+		Synpcc7942_2300	0.20	-0.7
2,370,028	+		Synpcc7942_2300	0.24	+1.1
2,370,036	-		Synpcc7942_2300	0.25	+1.6
2,370,050	+		Synpcc7942_2300	0.28	+0.8
2,370,197	+		Synpcc7942_2300	0.58	-1.7
2,370,238	+		Synpcc7942_2300	0.66	+0.3
2,370,246	+		Synpcc7942_2300	0.68	+1.5
2,370,246	-		Synpcc7942_2300	0.68	+3.7
2,370,252	+		Synpcc7942_2300	0.69	+0.7
2,370,265	-		Synpcc7942_2300	0.72	-2.0
2,370,265	-		Synpcc7942_2300	0.72	-2.0
2,370,347	-		Synpcc7942_2300	0.88	-0.5
2,370,365	+				+1.2
2,370,365	+				+0.9
2,370,365	+				+2.1
2,370,365	+				+0.2
2,370,373	-				-1.7
2,370,417	-				+2.3
2,370,418	-				+1.6
2,370,440	-				+4.2
2,370,440	-				-0.7
2,370,563	+				-1.9
2,370,588	-		Synpcc7942_2301	0.17	+0.5