Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2139

Experiment: Rifampicin 0.000625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000625 mg/ml
2,222,973	+				-2.0
2,223,142	+				+0.3
2,223,172	-				+1.3
2,223,182	-				+2.3
2,223,214	+				-1.0
2,223,243	-				-3.5
2,223,267	+				+1.7
2,223,273	-				-0.7
2,223,275	+				+1.9
2,223,275	-				-1.7
2,223,278	+				+0.9
2,223,330	-				+0.8
2,223,332	+				+1.8
2,223,340	-				+1.1
2,223,348	+				+0.3
2,223,371	+				-0.3
2,223,523	+				-1.7
2,223,574	-				+2.6
2,223,633	-				+0.8
2,223,787	+		Synpcc7942_2139	0.30	-0.5
2,223,880	-		Synpcc7942_2139	0.45	+1.3
2,223,880	-		Synpcc7942_2139	0.45	-1.7
2,223,908	+		Synpcc7942_2139	0.50	-3.2
2,223,984	-		Synpcc7942_2139	0.62	-2.2
2,224,000	+		Synpcc7942_2139	0.65	-0.7
2,224,000	+		Synpcc7942_2139	0.65	-1.8
2,224,083	+		Synpcc7942_2139	0.79	-2.0
2,224,175	+				-1.1
2,224,183	-				-2.0
2,224,185	+				-1.7
2,224,235	+				+0.8
2,224,236	+				+0.3
2,224,236	+				-1.4
2,224,244	-				+1.1
2,224,244	-				+0.3
2,224,244	-				-0.1
2,224,244	-				+1.3
2,224,248	+				+1.3
2,224,257	-				+1.3
2,224,350	+				+3.8
2,224,363	-		Synpcc7942_2140	0.12	-0.7
2,224,365	+		Synpcc7942_2140	0.12	-1.7
2,224,416	+		Synpcc7942_2140	0.24	-0.9
2,224,416	+		Synpcc7942_2140	0.24	-1.7
2,224,416	+		Synpcc7942_2140	0.24	-2.2
2,224,416	+		Synpcc7942_2140	0.24	-0.1
2,224,465	-		Synpcc7942_2140	0.36	-1.8
2,224,465	-		Synpcc7942_2140	0.36	+1.4
2,224,470	-		Synpcc7942_2140	0.37	-1.4
2,224,479	+		Synpcc7942_2140	0.39	+0.3
2,224,484	+		Synpcc7942_2140	0.40	-2.0
2,224,487	-		Synpcc7942_2140	0.41	+1.5
2,224,508	+		Synpcc7942_2140	0.46	-1.8
2,224,508	+		Synpcc7942_2140	0.46	-0.2
2,224,542	+		Synpcc7942_2140	0.53	+1.7
2,224,550	-		Synpcc7942_2140	0.55	+0.9
2,224,563	-		Synpcc7942_2140	0.58	+0.8
2,224,570	-		Synpcc7942_2140	0.60	-0.7
2,224,570	-		Synpcc7942_2140	0.60	-0.7
2,224,588	+		Synpcc7942_2140	0.64	+0.6
2,224,639	+		Synpcc7942_2140	0.76	+0.5
2,224,639	+		Synpcc7942_2140	0.76	-1.7
2,224,668	-		Synpcc7942_2140	0.83	+0.4
2,224,693	+		Synpcc7942_2140	0.88	+0.6
2,224,693	+		Synpcc7942_2140	0.88	-1.7
2,224,701	-				-0.3
2,224,711	-				-0.9
2,224,743	+				+1.1
2,224,751	-				+0.8
2,224,756	-				+0.2
2,224,776	-				-0.5
2,224,789	-				+0.0
2,224,827	-				+1.3
2,224,892	-				+1.7
2,224,893	-				+0.3
2,224,909	+				+0.3
2,224,920	+				-2.8
2,224,954	-				+0.6
2,224,957	+				-0.9