Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1872

Experiment: Rifampicin 0.000625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000625 mg/ml
1,943,049	-				+0.1
1,943,059	+				+0.6
1,943,059	-				+1.1
1,943,328	+				+1.1
1,943,372	+		Synpcc7942_1871	0.12	-2.3
1,943,429	-		Synpcc7942_1871	0.23	+0.2
1,943,457	+		Synpcc7942_1871	0.28	-1.3
1,943,527	+		Synpcc7942_1871	0.41	-1.8
1,943,527	+		Synpcc7942_1871	0.41	-0.8
1,943,527	+		Synpcc7942_1871	0.41	-0.8
1,943,535	-		Synpcc7942_1871	0.43	+1.9
1,943,535	-		Synpcc7942_1871	0.43	-0.0
1,943,535	-		Synpcc7942_1871	0.43	-2.1
1,943,535	-		Synpcc7942_1871	0.43	-0.8
1,943,535	-		Synpcc7942_1871	0.43	+0.8
1,943,561	-		Synpcc7942_1871	0.47	-0.8
1,943,571	-		Synpcc7942_1871	0.49	+1.8
1,943,571	-		Synpcc7942_1871	0.49	-1.6
1,943,572	-		Synpcc7942_1871	0.49	-2.3
1,943,646	+		Synpcc7942_1871	0.63	-1.8
1,943,691	+		Synpcc7942_1871	0.72	+0.6
1,943,875	+				+2.2
1,943,883	-				+0.8
1,943,883	-				+0.2
1,943,990	-				+0.4
1,944,030	+				+0.5
1,944,030	+				+2.8
1,944,030	+				-0.8
1,944,030	+				-0.8
1,944,030	+				-1.3
1,944,030	+				+0.4
1,944,030	+				-0.1
1,944,038	-				+0.5
1,944,038	-				-0.4
1,944,038	-				-2.3
1,944,041	+				+1.2
1,944,069	+				-2.6
1,944,075	+				+1.7
1,944,107	+		Synpcc7942_1872	0.11	+2.1
1,944,391	+		Synpcc7942_1872	0.30	-1.8
1,944,401	+		Synpcc7942_1872	0.31	-2.7
1,944,401	+		Synpcc7942_1872	0.31	+0.6
1,944,501	-		Synpcc7942_1872	0.38	+2.9
1,944,553	+		Synpcc7942_1872	0.42	-0.8
1,944,669	+		Synpcc7942_1872	0.50	-0.0
1,944,711	-		Synpcc7942_1872	0.52	+1.3
1,944,936	+		Synpcc7942_1872	0.68	-0.3
1,944,999	-		Synpcc7942_1872	0.72	-0.8
1,945,031	-		Synpcc7942_1872	0.75	-2.6
1,945,241	+		Synpcc7942_1872	0.89	-0.5
1,945,249	-		Synpcc7942_1872	0.90	-1.3
1,945,264	+				+0.9
1,945,274	+				+0.6
1,945,274	+				+1.8
1,945,274	+				-0.8
1,945,280	+				-0.1
1,945,288	-				+0.2
1,945,313	+				-1.6
1,945,323	+				-0.3
1,945,335	+				-0.3
1,945,336	+				-1.8
1,945,336	+				+3.2
1,945,343	-				+0.5
1,945,343	-				-2.8
1,945,346	+				-1.3
1,945,498	+		Synpcc7942_1873	0.15	+0.1
1,945,505	-		Synpcc7942_1873	0.16	-0.8
1,945,506	-		Synpcc7942_1873	0.16	+1.0
1,945,506	-		Synpcc7942_1873	0.16	-0.2
1,945,506	-		Synpcc7942_1873	0.16	+0.7
1,945,620	-		Synpcc7942_1873	0.33	+1.4
1,945,677	+		Synpcc7942_1873	0.41	+1.8
1,945,715	-		Synpcc7942_1873	0.47	-1.8
1,945,749	+		Synpcc7942_1873	0.52	-2.3
1,945,760	+		Synpcc7942_1873	0.53	+0.4
1,945,815	-		Synpcc7942_1873	0.62	+1.2
1,945,911	-		Synpcc7942_1873	0.76	+0.5
1,946,046	-				-0.8
1,946,082	+				+1.9
1,946,125	+				-2.9
1,946,146	+				-1.3
1,946,146	+				+1.3
1,946,273	+		Synpcc7942_1874	0.25	-0.3
1,946,281	-		Synpcc7942_1874	0.27	+1.0
1,946,281	-		Synpcc7942_1874	0.27	-1.3
1,946,281	-		Synpcc7942_1874	0.27	+0.6