Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1834

Experiment: Rifampicin 0.000625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000625 mg/ml
1,901,684	-				-2.1
1,901,697	-				+0.2
1,901,803	-				+0.2
1,901,829	-				-1.6
1,901,858	+		Synpcc7942_1833	0.11	-0.8
1,901,866	-		Synpcc7942_1833	0.12	+0.5
1,901,866	-		Synpcc7942_1833	0.12	+0.2
1,901,866	-		Synpcc7942_1833	0.12	+0.2
1,901,866	-		Synpcc7942_1833	0.12	-2.8
1,901,905	+		Synpcc7942_1833	0.18	+1.2
1,901,917	+		Synpcc7942_1833	0.19	-2.1
1,901,924	+		Synpcc7942_1833	0.20	-0.7
1,901,932	-		Synpcc7942_1833	0.21	-1.4
1,901,995	+		Synpcc7942_1833	0.29	-0.4
1,902,033	+		Synpcc7942_1833	0.34	+2.1
1,902,041	-		Synpcc7942_1833	0.35	-1.1
1,902,106	-		Synpcc7942_1833	0.44	-0.4
1,902,154	-		Synpcc7942_1833	0.50	+0.4
1,902,154	-		Synpcc7942_1833	0.50	-0.4
1,902,161	+		Synpcc7942_1833	0.51	-0.2
1,902,225	+		Synpcc7942_1833	0.60	+0.2
1,902,237	+		Synpcc7942_1833	0.61	+0.2
1,902,245	-		Synpcc7942_1833	0.62	-1.4
1,902,255	-		Synpcc7942_1833	0.64	-2.8
1,902,255	-		Synpcc7942_1833	0.64	-0.6
1,902,334	+		Synpcc7942_1833	0.74	-0.8
1,902,336	-		Synpcc7942_1833	0.74	-0.8
1,902,342	-				-0.8
1,902,342	-		Synpcc7942_1833	0.75	-0.8
1,902,353	-		Synpcc7942_1833	0.77	-0.3
1,902,354	+		Synpcc7942_1833	0.77	-1.1
1,902,372	-		Synpcc7942_1833	0.79	-1.0
1,902,446	+		Synpcc7942_1833	0.89	-1.6
1,902,468	+				+2.2
1,902,468	-				-0.8
1,902,473	+				+0.8
1,902,473	+				+0.9
1,902,476	-				-1.8
1,902,476	-				+0.6
1,902,483	+				+1.3
1,902,506	-				+1.2
1,902,526	+				-0.3
1,902,526	+				-0.7
1,902,526	+				+0.4
1,902,531	+				+0.2
1,902,534	-				+0.8
1,902,584	+		Synpcc7942_1834	0.12	-0.5
1,902,600	-		Synpcc7942_1834	0.15	+0.2
1,902,603	+		Synpcc7942_1834	0.16	-1.3
1,902,603	+		Synpcc7942_1834	0.16	+0.8
1,902,603	+		Synpcc7942_1834	0.16	-0.8
1,902,603	+		Synpcc7942_1834	0.16	+0.7
1,902,603	+		Synpcc7942_1834	0.16	-2.1
1,902,603	+		Synpcc7942_1834	0.16	-1.4
1,902,603	+				-0.8
1,902,611	-		Synpcc7942_1834	0.18	-2.8
1,902,611	-				+0.2
1,902,611	-		Synpcc7942_1834	0.18	-0.4
1,902,611	-		Synpcc7942_1834	0.18	+0.9
1,902,617	-		Synpcc7942_1834	0.19	+0.2
1,902,654	+		Synpcc7942_1834	0.27	+0.2
1,902,672	-				+0.2
1,902,679	+		Synpcc7942_1834	0.32	+0.9
1,902,699	-		Synpcc7942_1834	0.37	+1.1
1,902,701	+		Synpcc7942_1834	0.37	-1.4
1,902,703	-		Synpcc7942_1834	0.38	+3.1
1,902,707	+		Synpcc7942_1834	0.39	+1.7
1,902,708	+		Synpcc7942_1834	0.39	-0.3
1,902,716	-		Synpcc7942_1834	0.41	-1.4
1,902,734	+		Synpcc7942_1834	0.44	-0.8
1,902,734	+		Synpcc7942_1834	0.44	-0.8
1,902,741	+		Synpcc7942_1834	0.46	-0.4
1,902,764	+		Synpcc7942_1834	0.51	+1.7
1,902,930	-		Synpcc7942_1834	0.87	+1.0
1,902,974	+				+0.2
1,902,982	-				+1.3
1,903,055	-				-1.8
1,903,055	-				-1.4
1,903,083	-				-1.6
1,903,084	-				-1.4
1,903,094	+		Synpcc7942_1835	0.10	+1.4
1,903,099	-		Synpcc7942_1835	0.11	+0.2
1,903,100	-		Synpcc7942_1835	0.11	+0.9
1,903,104	+		Synpcc7942_1835	0.12	+2.4
1,903,122	+		Synpcc7942_1835	0.15	+0.9
1,903,141	+		Synpcc7942_1835	0.18	-0.6
1,903,142	+		Synpcc7942_1835	0.18	-2.9
1,903,144	-		Synpcc7942_1835	0.18	-0.4
1,903,149	-		Synpcc7942_1835	0.19	+1.3
1,903,149	-		Synpcc7942_1835	0.19	-2.4
1,903,149	-		Synpcc7942_1835	0.19	+1.8
1,903,149	-		Synpcc7942_1835	0.19	-0.4
1,903,157	-		Synpcc7942_1835	0.20	+0.7
1,903,157	-		Synpcc7942_1835	0.20	+1.8
1,903,200	-		Synpcc7942_1835	0.27	+1.9
1,903,242	-		Synpcc7942_1835	0.34	+1.2
1,903,248	-		Synpcc7942_1835	0.35	-1.9
1,903,268	+		Synpcc7942_1835	0.38	-1.4
1,903,328	-		Synpcc7942_1835	0.47	-0.8
1,903,367	-		Synpcc7942_1835	0.54	+0.5
1,903,375	+		Synpcc7942_1835	0.55	-0.2
1,903,394	+		Synpcc7942_1835	0.58	-2.1
1,903,402	-		Synpcc7942_1835	0.59	+2.2
1,903,421	-		Synpcc7942_1835	0.62	+0.6
1,903,421	-		Synpcc7942_1835	0.62	-0.8
1,903,446	+		Synpcc7942_1835	0.66	+4.4
1,903,447	-		Synpcc7942_1835	0.66	-0.3
1,903,449	-		Synpcc7942_1835	0.67	-0.2
1,903,504	-		Synpcc7942_1835	0.75	-0.6
1,903,519	+		Synpcc7942_1835	0.78	-1.4
1,903,560	-		Synpcc7942_1835	0.84	+1.5
1,903,560	-		Synpcc7942_1835	0.84	-0.6