Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1597

Experiment: Rifampicin 0.000625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000625 mg/ml
1,662,743	+				-0.8
1,662,831	-				+1.0
1,662,831	-				-0.3
1,662,856	+				-0.3
1,662,864	-				-3.1
1,662,909	+				-1.2
1,663,048	-	acdS	Synpcc7942_1596	0.24	-3.7
1,663,064	+	acdS	Synpcc7942_1596	0.26	-2.3
1,663,072	-	acdS	Synpcc7942_1596	0.27	-2.4
1,663,096	-	acdS	Synpcc7942_1596	0.30	-3.7
1,663,121	+	acdS	Synpcc7942_1596	0.34	-1.9
1,663,151	-	acdS	Synpcc7942_1596	0.38	-4.5
1,663,160	-	acdS	Synpcc7942_1596	0.39	-3.1
1,663,170	-	acdS	Synpcc7942_1596	0.41	-2.2
1,663,188	+	acdS	Synpcc7942_1596	0.43	-5.1
1,663,196	-	acdS	Synpcc7942_1596	0.44	-1.9
1,663,196	-	acdS	Synpcc7942_1596	0.44	-2.3
1,663,196	-	acdS	Synpcc7942_1596	0.44	-0.3
1,663,198	+	acdS	Synpcc7942_1596	0.44	-2.8
1,663,211	+	acdS	Synpcc7942_1596	0.46	-3.6
1,663,257	+	acdS	Synpcc7942_1596	0.52	-3.8
1,663,260	-	acdS	Synpcc7942_1596	0.53	-2.5
1,663,343	-	acdS	Synpcc7942_1596	0.64	-5.7
1,663,399	-	acdS	Synpcc7942_1596	0.72	-1.6
1,663,441	-	acdS	Synpcc7942_1596	0.77	-1.6
1,663,479	+	acdS	Synpcc7942_1596	0.82	-4.9
1,663,500	-	acdS	Synpcc7942_1596	0.85	-3.3
1,663,536	-				-2.6
1,663,541	-				-3.3
1,663,590	-				-2.2
1,663,590	-				+1.4
1,664,298	+				-0.8
1,664,306	-				+0.6
1,664,334	+				+0.4
1,664,334	+				-0.5
1,664,342	-				+2.2
1,664,350	-				+1.1
1,664,359	-				+2.2
1,664,364	-				-1.2
1,664,427	+		Synpcc7942_1598	0.15	-0.4
1,664,428	+		Synpcc7942_1598	0.15	+1.3
1,664,470	-		Synpcc7942_1598	0.21	-0.2
1,664,479	-		Synpcc7942_1598	0.22	-0.6
1,664,479	-		Synpcc7942_1598	0.22	+0.6
1,664,482	+		Synpcc7942_1598	0.22	+0.3
1,664,515	+		Synpcc7942_1598	0.26	+2.0
1,664,515	-		Synpcc7942_1598	0.26	-2.4
1,664,540	+		Synpcc7942_1598	0.29	+1.4
1,664,540	+		Synpcc7942_1598	0.29	-0.4
1,664,540	+		Synpcc7942_1598	0.29	+2.5
1,664,548	-		Synpcc7942_1598	0.30	-2.2
1,664,548	-		Synpcc7942_1598	0.30	+4.8
1,664,549	+		Synpcc7942_1598	0.31	-1.6
1,664,549	+		Synpcc7942_1598	0.31	+0.4
1,664,549	+		Synpcc7942_1598	0.31	+2.3
1,664,549	+		Synpcc7942_1598	0.31	-0.0
1,664,549	+		Synpcc7942_1598	0.31	-1.6
1,664,555	+		Synpcc7942_1598	0.31	+0.4
1,664,557	-		Synpcc7942_1598	0.32	-0.6
1,664,563	-		Synpcc7942_1598	0.32	-1.6
1,664,567	+		Synpcc7942_1598	0.33	+0.1
1,664,577	+		Synpcc7942_1598	0.34	+0.4
1,664,580	-		Synpcc7942_1598	0.34	+1.4
1,664,662	-		Synpcc7942_1598	0.45	+2.5
1,664,666	+		Synpcc7942_1598	0.45	+2.4
1,664,666	+		Synpcc7942_1598	0.45	+0.6
1,664,666	+		Synpcc7942_1598	0.45	-0.8
1,664,672	+		Synpcc7942_1598	0.46	-1.6
1,664,673	+		Synpcc7942_1598	0.46	-2.8
1,664,674	-		Synpcc7942_1598	0.46	+2.2
1,664,674	-		Synpcc7942_1598	0.46	+2.0
1,664,680	-		Synpcc7942_1598	0.47	+1.3
1,664,680	-		Synpcc7942_1598	0.47	-1.6
1,664,680	-		Synpcc7942_1598	0.47	+0.4
1,664,733	+		Synpcc7942_1598	0.54	+0.0
1,664,741	-		Synpcc7942_1598	0.55	+1.4
1,664,751	-		Synpcc7942_1598	0.56	+1.0
1,664,751	-		Synpcc7942_1598	0.56	-1.4
1,664,777	-		Synpcc7942_1598	0.59	+0.5
1,664,787	+		Synpcc7942_1598	0.61	+2.1
1,664,787	-		Synpcc7942_1598	0.61	+2.4
1,664,787	-		Synpcc7942_1598	0.61	+0.6
1,664,795	-		Synpcc7942_1598	0.62	+0.8
1,664,795	-		Synpcc7942_1598	0.62	-1.2
1,664,814	+		Synpcc7942_1598	0.64	+0.3
1,664,826	+		Synpcc7942_1598	0.65	-0.8
1,664,826	+		Synpcc7942_1598	0.65	-1.2
1,664,834	-		Synpcc7942_1598	0.66	+1.4
1,664,851	+		Synpcc7942_1598	0.69	-1.3
1,664,931	+		Synpcc7942_1598	0.79	+0.7
1,664,931	+		Synpcc7942_1598	0.79	+2.0
1,664,939	-		Synpcc7942_1598	0.80	+0.8
1,664,965	+		Synpcc7942_1598	0.83	+0.0
1,664,977	-		Synpcc7942_1598	0.84	+0.4
1,664,996	+		Synpcc7942_1598	0.87	+2.0
1,665,016	-		Synpcc7942_1598	0.89	-1.2
1,665,030	-				+1.2
1,665,056	+				-0.4
1,665,061	+				+0.7
1,665,061	+				+1.1
1,665,069	-				-0.6
1,665,069	-				+0.3
1,665,069	-				-0.1
1,665,069	-				-1.6
1,665,071	-				-0.9
1,665,077	+				+1.2
1,665,079	+				+0.2
1,665,089	+				-2.6
1,665,097	-				+3.6
1,665,131	-				-0.9
1,665,165	+				-0.4
1,665,193	+				-2.2
1,665,221	-		Synpcc7942_1599	0.11	-2.5
1,665,221	-		Synpcc7942_1599	0.11	-2.6
1,665,246	+		Synpcc7942_1599	0.14	-0.3
1,665,246	+		Synpcc7942_1599	0.14	+0.8
1,665,271	+		Synpcc7942_1599	0.16	+1.7
1,665,271	+		Synpcc7942_1599	0.16	+0.4
1,665,271	+		Synpcc7942_1599	0.16	-3.1