Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1480

Experiment: Rifampicin 0.000625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000625 mg/ml
1,530,195	-				-0.1
1,530,230	+				+0.4
1,530,230	+				+2.5
1,530,253	+				+1.1
1,530,253	+				+3.0
1,530,253	+				+0.8
1,530,253	+				+0.2
1,530,253	+				+0.9
1,530,253	+				+2.2
1,530,253	+				-0.6
1,530,253	+				-1.1
1,530,256	+				-0.5
1,530,261	-				+0.7
1,530,261	-				-1.9
1,530,261	-				+2.5
1,530,261	-				+2.2
1,530,261	-				-0.5
1,530,261	-				+0.2
1,530,261	-				+0.7
1,530,261	-				-0.6
1,530,261	-				+0.4
1,530,261	-				-1.0
1,530,279	+				+1.5
1,530,287	-				-1.2
1,530,288	-				+2.5
1,530,320	-				-0.9
1,530,320	-				+0.4
1,530,351	+				-0.2
1,530,359	-				-1.1
1,530,364	-				+0.4
1,530,412	+				-0.7
1,530,422	+				-1.2
1,530,550	-	cytM	Synpcc7942_1478	0.31	-1.9
1,530,552	+	cytM	Synpcc7942_1478	0.31	+0.4
1,530,560	-	cytM	Synpcc7942_1478	0.33	-2.6
1,530,632	+	cytM	Synpcc7942_1478	0.50	+1.1
1,530,645	+	cytM	Synpcc7942_1478	0.53	-2.4
1,530,654	-	cytM	Synpcc7942_1478	0.55	-1.9
1,530,654	-	cytM	Synpcc7942_1478	0.55	-0.6
1,530,654	-	cytM	Synpcc7942_1478	0.55	-1.2
1,530,654	-	cytM	Synpcc7942_1478	0.55	-1.2
1,530,654	-	cytM	Synpcc7942_1478	0.55	-0.6
1,530,656	+	cytM	Synpcc7942_1478	0.55	-3.1
1,530,664	-	cytM	Synpcc7942_1478	0.57	-0.6
1,530,669	-	cytM	Synpcc7942_1478	0.58	-0.6
1,530,742	+	cytM	Synpcc7942_1478	0.75	-1.2
1,530,742	+	cytM	Synpcc7942_1478	0.75	-2.2
1,530,744	-	cytM	Synpcc7942_1478	0.75	+0.1
1,530,783	+	cytM	Synpcc7942_1478	0.84	-3.1
1,530,847	+				-0.2
1,530,849	+				+0.1
1,530,889	+				-0.9
1,530,889	+				+1.8
1,530,889	+				-1.4
1,530,889	+				+0.4
1,530,895	+				+1.3
1,530,895	+				+1.1
1,530,895	+				+2.5
1,531,191	+				+1.1
1,531,213	+				-0.0
1,531,213	+				+0.5
1,531,213	+				-2.4
1,531,221	-				+3.5
1,531,313	-		Synpcc7942_1480	0.21	-1.6
1,531,313	-		Synpcc7942_1480	0.21	-1.6
1,531,330	-		Synpcc7942_1480	0.25	-2.6
1,531,397	+		Synpcc7942_1480	0.37	-3.5
1,531,436	-		Synpcc7942_1480	0.44	+0.1
1,531,437	+		Synpcc7942_1480	0.44	-0.6
1,531,447	+		Synpcc7942_1480	0.46	-0.6
1,531,467	-		Synpcc7942_1480	0.49	-0.5
1,531,527	+		Synpcc7942_1480	0.60	-0.6
1,531,527	+		Synpcc7942_1480	0.60	-2.6
1,531,527	+		Synpcc7942_1480	0.60	-0.6
1,531,527	+		Synpcc7942_1480	0.60	+0.4
1,531,535	-		Synpcc7942_1480	0.61	+0.9
1,531,541	+		Synpcc7942_1480	0.63	-2.2
1,531,547	-		Synpcc7942_1480	0.64	-2.8
1,531,548	+		Synpcc7942_1480	0.64	-2.2
1,531,548	+		Synpcc7942_1480	0.64	-1.2
1,531,556	-		Synpcc7942_1480	0.65	-0.2
1,531,659	-		Synpcc7942_1480	0.84	-0.6
1,531,659	-		Synpcc7942_1480	0.84	-1.6
1,531,695	+				-1.6
1,531,755	+				-0.0
1,531,763	-				-1.6
1,532,408	-				-0.6
1,532,545	+				-1.2
1,532,553	-				+1.2
1,532,553	-				-1.9
1,532,553	-				-0.6
1,532,554	-				-2.0
1,532,556	+				+2.2
1,532,556	+				-1.2
1,532,556	+				+1.9
1,532,564	-				-0.6
1,532,570	+				-0.5
1,532,570	+				-1.0
1,532,578	-				+0.0
1,532,578	-				-1.2
1,532,624	-				-3.1
1,532,747	+				-1.9