Experiment: LB in EcoFAB_3.5mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05983 and H281DRAFT_05984 are separated by 145 nucleotides H281DRAFT_05984 and H281DRAFT_05985 are separated by 45 nucleotides H281DRAFT_05985 and H281DRAFT_05986 are separated by 463 nucleotides
H281DRAFT_05983: H281DRAFT_05983 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 126,306 to 127,058
_05983
H281DRAFT_05984: H281DRAFT_05984 - conserved hypothetical protein, at 127,204 to 127,506
_05984
H281DRAFT_05985: H281DRAFT_05985 - Predicted integral membrane protein, at 127,552 to 128,256
_05985
H281DRAFT_05986: H281DRAFT_05986 - transcriptional regulator, TetR family, at 128,720 to 129,355
_05986
Position (kb) 127
128
129 Strain fitness (log2 ratio) -1
0
1
2 at 126.772 kb on + strand, within H281DRAFT_05983 at 127.011 kb on + strand at 127.012 kb on - strand at 127.204 kb on - strand at 127.265 kb on - strand, within H281DRAFT_05984 at 127.310 kb on - strand, within H281DRAFT_05984 at 127.342 kb on + strand, within H281DRAFT_05984 at 127.549 kb on + strand at 127.550 kb on - strand at 127.553 kb on + strand at 127.553 kb on + strand at 127.793 kb on + strand, within H281DRAFT_05985 at 127.794 kb on - strand, within H281DRAFT_05985 at 127.794 kb on - strand, within H281DRAFT_05985 at 127.794 kb on - strand, within H281DRAFT_05985 at 128.027 kb on + strand, within H281DRAFT_05985 at 128.244 kb on + strand at 128.245 kb on - strand at 128.248 kb on + strand at 128.248 kb on + strand at 128.330 kb on + strand at 128.381 kb on + strand at 128.382 kb on - strand at 128.382 kb on - strand at 128.382 kb on - strand at 128.384 kb on + strand at 128.384 kb on + strand at 128.384 kb on + strand at 128.385 kb on - strand at 128.501 kb on + strand at 128.507 kb on + strand at 128.508 kb on - strand at 128.508 kb on - strand at 128.770 kb on - strand at 128.964 kb on + strand, within H281DRAFT_05986 at 129.195 kb on + strand, within H281DRAFT_05986 at 129.195 kb on + strand, within H281DRAFT_05986 at 129.195 kb on + strand, within H281DRAFT_05986
Per-strain Table
Position Strand Gene LocusTag Fraction LB in EcoFAB_3.5mL remove 126,772 + H281DRAFT_05983 0.62 +1.0 127,011 + +0.5 127,012 - +0.4 127,204 - -0.2 127,265 - H281DRAFT_05984 0.20 -0.7 127,310 - H281DRAFT_05984 0.35 -0.6 127,342 + H281DRAFT_05984 0.46 -1.5 127,549 + +2.6 127,550 - +1.0 127,553 + -0.6 127,553 + +0.1 127,793 + H281DRAFT_05985 0.34 -0.7 127,794 - H281DRAFT_05985 0.34 +0.3 127,794 - H281DRAFT_05985 0.34 +0.6 127,794 - H281DRAFT_05985 0.34 +1.2 128,027 + H281DRAFT_05985 0.67 +0.1 128,244 + -0.2 128,245 - -0.6 128,248 + -0.1 128,248 + +1.8 128,330 + +0.3 128,381 + -0.5 128,382 - +0.0 128,382 - +0.4 128,382 - +0.1 128,384 + +0.3 128,384 + +0.5 128,384 + +0.5 128,385 - +0.2 128,501 + +1.6 128,507 + -0.4 128,508 - +1.1 128,508 - -0.4 128,770 - -0.2 128,964 + H281DRAFT_05986 0.38 -0.9 129,195 + H281DRAFT_05986 0.75 -1.0 129,195 + H281DRAFT_05986 0.75 +1.1 129,195 + H281DRAFT_05986 0.75 -0.7
Or see this region's nucleotide sequence