Experiment: LB in EcoFAB_3.5mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04024 and H281DRAFT_04025 are separated by 208 nucleotides H281DRAFT_04025 and H281DRAFT_04026 are separated by 602 nucleotides
H281DRAFT_04024: H281DRAFT_04024 - Aspartate/methionine/tyrosine aminotransferase, at 125,469 to 126,668
_04024
H281DRAFT_04025: H281DRAFT_04025 - Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), at 126,877 to 128,076
_04025
H281DRAFT_04026: H281DRAFT_04026 - 3-octaprenyl-4hydroxybenzoate decarboxylase, at 128,679 to 130,247
_04026
Position (kb) 126
127
128
129 Strain fitness (log2 ratio) -2
-1
0
1
2 at 125.992 kb on + strand, within H281DRAFT_04024 at 125.993 kb on - strand, within H281DRAFT_04024 at 126.105 kb on + strand, within H281DRAFT_04024 at 126.105 kb on + strand, within H281DRAFT_04024 at 126.106 kb on - strand, within H281DRAFT_04024 at 126.120 kb on + strand, within H281DRAFT_04024 at 126.120 kb on + strand, within H281DRAFT_04024 at 126.129 kb on - strand, within H281DRAFT_04024 at 126.151 kb on - strand, within H281DRAFT_04024 at 126.189 kb on + strand, within H281DRAFT_04024 at 126.189 kb on + strand, within H281DRAFT_04024 at 126.189 kb on + strand, within H281DRAFT_04024 at 126.190 kb on - strand, within H281DRAFT_04024 at 126.190 kb on - strand, within H281DRAFT_04024 at 126.197 kb on + strand, within H281DRAFT_04024 at 126.197 kb on + strand, within H281DRAFT_04024 at 126.197 kb on + strand, within H281DRAFT_04024 at 126.198 kb on - strand, within H281DRAFT_04024 at 126.346 kb on - strand, within H281DRAFT_04024 at 126.447 kb on + strand, within H281DRAFT_04024 at 126.447 kb on + strand, within H281DRAFT_04024 at 126.447 kb on + strand, within H281DRAFT_04024 at 126.448 kb on - strand, within H281DRAFT_04024 at 126.448 kb on - strand, within H281DRAFT_04024 at 126.582 kb on + strand at 126.582 kb on + strand at 126.583 kb on - strand at 126.583 kb on - strand at 126.584 kb on + strand at 126.584 kb on + strand at 126.584 kb on + strand at 126.584 kb on + strand at 126.584 kb on + strand at 126.585 kb on - strand at 126.597 kb on + strand at 126.597 kb on + strand at 127.166 kb on + strand, within H281DRAFT_04025 at 127.200 kb on - strand, within H281DRAFT_04025 at 127.200 kb on - strand, within H281DRAFT_04025 at 127.200 kb on - strand, within H281DRAFT_04025 at 127.200 kb on - strand, within H281DRAFT_04025 at 127.314 kb on - strand, within H281DRAFT_04025 at 127.523 kb on + strand, within H281DRAFT_04025 at 127.523 kb on + strand, within H281DRAFT_04025 at 127.524 kb on - strand, within H281DRAFT_04025 at 127.709 kb on + strand, within H281DRAFT_04025 at 128.041 kb on - strand at 128.041 kb on - strand at 128.205 kb on - strand at 128.316 kb on - strand at 128.316 kb on - strand at 128.316 kb on - strand at 128.328 kb on + strand at 128.389 kb on - strand at 128.389 kb on - strand at 128.427 kb on - strand at 128.472 kb on - strand at 128.562 kb on - strand at 128.564 kb on + strand at 128.565 kb on - strand at 128.579 kb on + strand at 128.580 kb on - strand at 128.601 kb on + strand at 128.648 kb on + strand at 128.685 kb on + strand at 128.685 kb on + strand at 128.686 kb on - strand at 128.764 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB in EcoFAB_3.5mL remove 125,992 + H281DRAFT_04024 0.44 -0.3 125,993 - H281DRAFT_04024 0.44 +0.4 126,105 + H281DRAFT_04024 0.53 +0.8 126,105 + H281DRAFT_04024 0.53 +0.3 126,106 - H281DRAFT_04024 0.53 -0.3 126,120 + H281DRAFT_04024 0.54 +0.4 126,120 + H281DRAFT_04024 0.54 -1.0 126,129 - H281DRAFT_04024 0.55 +0.3 126,151 - H281DRAFT_04024 0.57 -0.3 126,189 + H281DRAFT_04024 0.60 -0.1 126,189 + H281DRAFT_04024 0.60 -0.3 126,189 + H281DRAFT_04024 0.60 -0.1 126,190 - H281DRAFT_04024 0.60 +0.6 126,190 - H281DRAFT_04024 0.60 -0.3 126,197 + H281DRAFT_04024 0.61 -0.4 126,197 + H281DRAFT_04024 0.61 +0.1 126,197 + H281DRAFT_04024 0.61 +0.9 126,198 - H281DRAFT_04024 0.61 +0.1 126,346 - H281DRAFT_04024 0.73 +0.0 126,447 + H281DRAFT_04024 0.81 +0.0 126,447 + H281DRAFT_04024 0.81 -0.1 126,447 + H281DRAFT_04024 0.81 -0.0 126,448 - H281DRAFT_04024 0.82 +0.6 126,448 - H281DRAFT_04024 0.82 +0.2 126,582 + +0.6 126,582 + -0.2 126,583 - +2.3 126,583 - +1.1 126,584 + +0.1 126,584 + -0.0 126,584 + +0.3 126,584 + -0.2 126,584 + +0.6 126,585 - -0.2 126,597 + +0.1 126,597 + -0.1 127,166 + H281DRAFT_04025 0.24 +0.2 127,200 - H281DRAFT_04025 0.27 +0.4 127,200 - H281DRAFT_04025 0.27 +0.0 127,200 - H281DRAFT_04025 0.27 +0.8 127,200 - H281DRAFT_04025 0.27 +1.0 127,314 - H281DRAFT_04025 0.36 +1.1 127,523 + H281DRAFT_04025 0.54 +1.2 127,523 + H281DRAFT_04025 0.54 +0.3 127,524 - H281DRAFT_04025 0.54 +0.6 127,709 + H281DRAFT_04025 0.69 +0.3 128,041 - +1.8 128,041 - +2.0 128,205 - -0.2 128,316 - +0.1 128,316 - -0.1 128,316 - -0.1 128,328 + -0.4 128,389 - -0.5 128,389 - +0.7 128,427 - +0.6 128,472 - +0.5 128,562 - -0.1 128,564 + -1.4 128,565 - -0.1 128,579 + +0.1 128,580 - -0.2 128,601 + +0.2 128,648 + -2.7 128,685 + -0.9 128,685 + -0.3 128,686 - +1.1 128,764 + -1.9
Or see this region's nucleotide sequence